Conservation of cofitness between CSW01_02455 and CSW01_06390 in Vibrio cholerae E7946 ATCC 55056

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02455 YggS family pyridoxal phosphate enzyme 1.0 CSW01_06390 thiol oxidoreductase 0.81 17
Shewanella loihica PV-4 0.55 Shew_1137 alanine racemase domain-containing protein (RefSeq) 0.32 Shew_0677 hypothetical protein (RefSeq) low > 60
Pseudomonas sp. DMC3 0.52 GFF209 Pyridoxal phosphate homeostasis protein 0.59 GFF5065 hypothetical protein low > 89
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_1011 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC 0.58 PfGW456L13_1775 Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites — —
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_2342 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC 0.59 Pf1N1B4_716 Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites — —
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_13425 hypothetical protein 0.60 AO356_18460 thiol oxidoreductase low > 104
Pseudomonas lactucae CFBP13502 0.50 GEMAOFIL_05482 Pyridoxal phosphate homeostasis protein 0.58 GEMAOFIL_04700 hypothetical protein low > 93
Pseudomonas simiae WCS417 0.50 PS417_26725 hypothetical protein 0.58 PS417_22735 thiol oxidoreductase low > 88
Acidovorax sp. GW101-3H11 0.50 Ac3H11_4474 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC 0.44 Ac3H11_1656 Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites low > 79
Pseudomonas sp. S08-1 0.50 OH686_10975 Pyridoxal phosphate-containing protein YggS 0.60 OH686_17385 Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites low > 80
Pseudomonas segetis P6 0.50 MPMX49_00611 Pyridoxal phosphate homeostasis protein 0.60 MPMX49_03766 hypothetical protein low > 75
Pseudomonas sp. BP01 0.50 JOY50_RS20910 YggS family pyridoxal phosphate-dependent enzyme 0.57 JOY50_RS14935 di-heme oxidoredictase family protein low > 84
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_4601 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC 0.59 Pf6N2E2_5618 Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites low > 103
Pseudomonas putida KT2440 0.49 PP_5094 putative enzyme with PLP binding domain 0.58 PP_0910 conserved exported protein of unknown function low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_0477 Protein of unknown function UPF0001 0.59 Psyr_4063 Protein of unknown function DUF1111 low > 86
Pseudomonas sp. RS175 0.49 PFR28_04242 Pyridoxal phosphate homeostasis protein 0.60 PFR28_03326 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_0477 Protein of unknown function UPF0001 0.59 Psyr_4063 Protein of unknown function DUF1111 low > 86
Pseudomonas fluorescens SBW25 0.49 PFLU_RS28370 YggS family pyridoxal phosphate-dependent enzyme 0.57 PFLU_RS24375 c-type cytochrome low > 109
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS28370 YggS family pyridoxal phosphate-dependent enzyme 0.57 PFLU_RS24375 c-type cytochrome low > 109
Pseudomonas stutzeri RCH2 0.49 Psest_0284 pyridoxal phosphate enzyme, YggS family 0.59 Psest_1158 Predicted thiol oxidoreductase low > 67
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2722 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC 0.43 GFF2483 Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites low > 90
Pseudomonas aeruginosa PA14 0.47 IKLFDK_23450 Pyridoxal phosphate homeostasis protein 0.60 IKLFDK_02245 thiol oxidoreductase low > 100
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_08160 hypothetical protein 0.57 AO353_03980 thiol oxidoreductase low > 101
Pseudomonas sp. SVBP6 0.47 COO64_RS13000 YggS family pyridoxal phosphate-dependent enzyme 0.57 COO64_RS12075 di-heme oxidoredictase family protein 0.54 8
Marinobacter adhaerens HP15 0.42 HP15_288 alanine racemase domain protein 0.50 HP15_2565 thiol oxidoreductase low > 73
Azospirillum brasilense Sp245 0.32 AZOBR_RS01870 alanine racemase 0.35 AZOBR_RS27020 thiol oxidoreductase — —
Xanthobacter sp. DMC5 0.31 GFF1427 Pyridoxal phosphate homeostasis protein 0.25 GFF3471 hypothetical protein — —
Agrobacterium fabrum C58 0.31 Atu2747 hypothetical protein 0.44 Atu0287 hypothetical protein low > 89
Azospirillum sp. SherDot2 0.30 MPMX19_00050 Pyridoxal phosphate homeostasis protein 0.43 MPMX19_03075 hypothetical protein low > 112
Dinoroseobacter shibae DFL-12 0.29 Dshi_0042 alanine racemase domain protein (RefSeq) 0.49 Dshi_0564 protein of unknown function DUF1111 (RefSeq) low > 64
Rhizobium sp. OAE497 0.29 ABIE40_RS19180 YggS family pyridoxal phosphate-dependent enzyme 0.45 ABIE40_RS01285 di-heme oxidoredictase family protein — —
Cellulophaga baltica 18 0.29 M666_RS17595 YggS family pyridoxal phosphate-dependent enzyme 0.39 M666_RS19065 di-heme oxidoredictase family protein low > 67
Sinorhizobium meliloti 1021 0.28 SMc02812 hypothetical protein 0.44 SMc00401 hypothetical protein low > 103
Phaeobacter inhibens DSM 17395 0.27 PGA1_c33360 putative alanine racemase 0.47 PGA1_c08280 Predicted thiol oxidoreductase low > 62
Parabacteroides merdae CL09T00C40 0.27 HMPREF1078_RS15965 YggS family pyridoxal phosphate-dependent enzyme 0.26 HMPREF1078_RS04250 di-heme oxidoredictase family protein low > 61
Bacteroides thetaiotaomicron VPI-5482 0.27 BT1332 conserved hypothetical protein (NCBI ptt file) 0.24 BT2478 conserved hypothetical protein (NCBI ptt file) low > 81
Echinicola vietnamensis KMM 6221, DSM 17526 0.26 Echvi_2233 pyridoxal phosphate enzyme, YggS family 0.22 Echvi_4122 Predicted thiol oxidoreductase low > 79
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS20000 YggS family pyridoxal phosphate-dependent enzyme 0.13 ABI39_RS14195 hypothetical protein low > 72
Synechococcus elongatus PCC 7942 0.25 Synpcc7942_2060 ylmE hypothetical protein 0.37 Synpcc7942_1461 irpB thiol oxidoreductase-like low > 38
Bacteroides ovatus ATCC 8483 0.24 BACOVA_00593 pyridoxal phosphate enzyme, YggS family 0.25 BACOVA_03802 hypothetical protein low > 96

Not shown: 79 genomes with orthologs for CSW01_02455 only; 0 genomes with orthologs for CSW01_06390 only