Conservation of cofitness between CSW01_11740 and CSW01_06280 in Vibrio cholerae E7946 ATCC 55056

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11740 cysteine desulfurase CsdA 1.0 CSW01_06280 succinylglutamate desuccinylase 0.66 13
Marinobacter adhaerens HP15 0.54 HP15_2987 cysteine desulfurase, SufS subfamily 0.21 HP15_3034 succinylglutamate desuccinylase
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_24935 cysteine sulfinate desulfinase 0.24 AO353_02995 succinylglutamate desuccinylase low > 101
Alteromonas macleodii MIT1002 0.49 MIT1002_02797 putative cysteine desulfurase 0.26 MIT1002_01538 Succinylglutamate desuccinylase
Shewanella loihica PV-4 0.48 Shew_0735 SufS subfamily cysteine desulfurase (RefSeq) 0.28 Shew_1924 succinylglutamate desuccinylase (RefSeq)
Serratia liquefaciens MT49 0.48 IAI46_20350 cysteine desulfurase CsdA 0.22 IAI46_15315 succinylglutamate desuccinylase low > 86
Escherichia coli ECOR38 0.48 HEPCGN_19360 csdA cysteine desulfurase CsdA 0.24 HEPCGN_05290 astE succinylglutamate desuccinylase low > 88
Escherichia coli BW25113 0.48 b2810 csdA cysteine sulfinate desulfinase (NCBI) 0.24 b1744 astE succinylglutamate desuccinylase (NCBI) low > 76
Escherichia coli BL21 0.48 ECD_02661 cysteine sulfinate desulfinase 0.24 ECD_01713 succinylglutamate desuccinylase low > 61
Escherichia coli ECRC62 0.48 BNILDI_10490 csdA cysteine desulfurase CsdA 0.24 BNILDI_16225 astE succinylglutamate desuccinylase low > 75
Escherichia coli ECRC98 0.48 JDDGAC_23770 csdA cysteine desulfurase CsdA 0.24 JDDGAC_01500 astE succinylglutamate desuccinylase low > 87
Escherichia coli ECRC101 0.48 MCAODC_10630 csdA cysteine desulfurase CsdA 0.24 MCAODC_18485 astE succinylglutamate desuccinylase low > 88
Escherichia coli ECRC102 0.48 NIAGMN_17875 csdA cysteine desulfurase CsdA 0.24 NIAGMN_01140 astE succinylglutamate desuccinylase low > 80
Escherichia coli ECRC99 0.48 KEDOAH_08025 csdA cysteine desulfurase CsdA 0.24 KEDOAH_01185 astE succinylglutamate desuccinylase
Escherichia coli ECRC100 0.48 OKFHMN_20105 csdA cysteine desulfurase CsdA 0.24 OKFHMN_26925 astE succinylglutamate desuccinylase low > 79
Enterobacter asburiae PDN3 0.48 EX28DRAFT_2886 cysteine desulfurase, catalytic subunit CsdA 0.24 EX28DRAFT_1748 succinylglutamate desuccinylase (EC 3.5.1.96)
Escherichia coli Nissle 1917 0.48 ECOLIN_RS15660 cysteine desulfurase CsdA 0.24 ECOLIN_RS09725 succinylglutamate desuccinylase
Rahnella sp. WP5 0.48 EX31_RS13120 cysteine desulfurase CsdA 0.23 EX31_RS17390 succinylglutamate desuccinylase low > 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_00921 Cysteine desulfurase CsdA 0.24 OHPLBJKB_01988 Succinylglutamate desuccinylase low > 74
Escherichia fergusonii Becca 0.48 EFB2_01107 Cysteine desulfurase CsdA 0.24 EFB2_02249 Succinylglutamate desuccinylase low > 86
Escherichia coli ECOR27 0.48 NOLOHH_11985 csdA cysteine desulfurase CsdA 0.24 NOLOHH_17440 astE succinylglutamate desuccinylase low > 76
Klebsiella michiganensis M5al 0.48 BWI76_RS22965 cysteine sulfinate desulfinase 0.24 BWI76_RS11690 succinylglutamate desuccinylase low > 92
Erwinia amylovora T8 0.47 OLJFJH_14575 cysteine desulfurase SufS 0.25 OLJFJH_14785 succinylglutamate desuccinylase
Pantoea sp. MT58 0.47 IAI47_10860 cysteine desulfurase SufS 0.24 IAI47_11075 succinylglutamate desuccinylase
Enterobacter sp. TBS_079 0.47 MPMX20_03673 Cysteine desulfurase CsdA 0.24 MPMX20_01869 Succinylglutamate desuccinylase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF3562 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily 0.25 GFF3496 Succinylglutamate desuccinylase (EC 3.5.1.96) low > 78
Pantoea agglomerans CFBP13505 P0401 0.47 PagCFBP13505_RS17730 cysteine desulfurase SufS 0.24 PagCFBP13505_RS17520 succinylglutamate desuccinylase
Klebsiella pneumoniae MKP103 0.47 KDGMDA_03530 cysteine desulfurase CsdA 0.24 KDGMDA_19370 succinylglutamate desuccinylase low > 95
Shewanella amazonensis SB2B 0.46 Sama_2777 aminotransferase, class V (RefSeq) 0.28 Sama_1708 succinylglutamate desuccinylase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.46 SO3789 aminotransferase, class V (NCBI ptt file) 0.27 SO2338 astE succinylglutamate desuccinylase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.44 Shewana3_0808 cysteine desulfurase (RefSeq) 0.27 Shewana3_2132 succinylglutamate desuccinylase (RefSeq) low > 73
Pseudomonas sp. BP01 0.44 JOY50_RS26155 cysteine desulfurase 0.24 JOY50_RS00950 astE succinylglutamate desuccinylase low > 84
Pseudomonas sp. SVBP6 0.43 COO64_RS19605 aminotransferase class V-fold PLP-dependent enzyme 0.24 COO64_RS21585 astE succinylglutamate desuccinylase low > 93
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS06240 cysteine desulfurase 0.23 PFLU_RS23285 succinylglutamate desuccinylase low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS06240 cysteine desulfurase 0.23 PFLU_RS23285 succinylglutamate desuccinylase low > 109
Pseudomonas putida KT2440 0.43 PP_1529 Probable cysteine desulfurase 0.24 PP_4475 succinylglutamate desuccinylase 0.22 50
Pseudomonas simiae WCS417 0.43 PS417_06175 cysteine sulfinate desulfinase 0.23 PS417_21680 succinylglutamate desuccinylase low > 88
Pseudomonas sp. DMC3 0.42 GFF2046 Cysteine desulfurase SufS 0.23 GFF4873 Succinylglutamate desuccinylase low > 89
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_4717 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA 0.24 PfGW456L13_1977 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) low > 87
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_3076 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA 0.24 Pf1N1B4_3447 Succinylglutamate desuccinylase (EC 3.5.1.96) low > 87
Pseudomonas segetis P6 0.42 MPMX49_03468 Cysteine desulfurase SufS 0.25 MPMX49_03201 Succinylglutamate desuccinylase 0.42 28
Pseudomonas aeruginosa PA14 0.41 IKLFDK_18725 putative cysteine desulfurase 0.25 IKLFDK_04015 succinylglutamate desuccinylase low > 100
Pseudomonas stutzeri RCH2 0.41 Psest_1464 Selenocysteine lyase 0.18 Psest_2717 Succinylglutamate desuccinylase low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_1335 Aminotransferase, class V 0.25 Psyr_3559 succinylglutamate desuccinylase low > 86
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_1335 Aminotransferase, class V 0.25 Psyr_3559 succinylglutamate desuccinylase low > 86
Pseudomonas lactucae CFBP13502 0.40 GEMAOFIL_01405 Cysteine desulfurase SufS 0.23 GEMAOFIL_04479 Succinylglutamate desuccinylase low > 93
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_3079 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA 0.24 Pf6N2E2_5671 Succinylglutamate desuccinylase (EC 3.5.1.96) low > 103
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_06075 cysteine sulfinate desulfinase 0.24 AO356_18755 succinylglutamate desuccinylase low > 104
Pseudomonas sp. RS175 0.38 PFR28_00389 Cysteine desulfurase SufS 0.24 PFR28_03277 Succinylglutamate desuccinylase low > 88

Not shown: 42 genomes with orthologs for CSW01_11740 only; 8 genomes with orthologs for CSW01_06280 only