Conservation of cofitness between CSW01_18075 and CSW01_04695 in Vibrio cholerae E7946 ATCC 55056

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18075 nucleotide sugar dehydrogenase 1.0 CSW01_04695 AcrB/AcrD/AcrF family protein 0.51 4
Dickeya dianthicola ME23 0.75 DZA65_RS07165 nucleotide sugar dehydrogenase 0.22 DZA65_RS16170 multidrug efflux RND transporter permease subunit MdtC — —
Dickeya dianthicola 67-19 0.75 HGI48_RS06825 nucleotide sugar dehydrogenase 0.22 HGI48_RS15350 multidrug efflux RND transporter permease subunit MdtC — —
Dickeya dadantii 3937 0.75 DDA3937_RS06790 nucleotide sugar dehydrogenase 0.22 DDA3937_RS15270 multidrug efflux RND transporter permease subunit MdtC — —
Shewanella sp. ANA-3 0.74 Shewana3_1387 UDP-glucose/GDP-mannose dehydrogenase (RefSeq) 0.75 Shewana3_1083 acriflavin resistance protein (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.72 MIT1002_03556 UDP-glucose 6-dehydrogenase 0.44 MIT1002_00729 putative efflux pump membrane transporter TtgB — —
Castellaniella sp019104865 MT123 0.72 ABCV34_RS12915 nucleotide sugar dehydrogenase 0.22 ABCV34_RS14625 efflux RND transporter permease subunit low > 48
Marinobacter adhaerens HP15 0.71 HP15_2385 UDP-glucose 6-dehydrogenase 0.38 HP15_3693 multidrug resistance protein low > 73
Shewanella oneidensis MR-1 0.69 SO4687 ugd UDP-glucose 6-dehydrogenase (NCBI ptt file) 0.75 SO3484 AcrB/AcrD/AcrF family protein (NCBI ptt file) low > 76
Sphingobium sp. HT1-2 0.64 GFF4211 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) 0.39 GFF2495 RND efflux system, inner membrane transporter low > 95
Phocaeicola vulgatus CL09T03C04 0.58 HMPREF1058_RS16125 nucleotide sugar dehydrogenase 0.32 HMPREF1058_RS13825 efflux RND transporter permease subunit low > 67
Bacteroides thetaiotaomicron VPI-5482 0.58 BT0379 UDP-glucose 6-dehydrogenase (NCBI ptt file) 0.31 BT2252 multidrug efflux membrane fusion protein (NCBI ptt file) low > 81
Caulobacter crescentus NA1000 Δfur 0.22 CCNA_02464 UDP-glucose 6-dehydrogenase 0.33 CCNA_01262 cation/multidrug efflux pump, AcrB family low > 67
Caulobacter crescentus NA1000 0.22 CCNA_02464 UDP-glucose 6-dehydrogenase 0.33 CCNA_01262 cation/multidrug efflux pump, AcrB family low > 66
Mucilaginibacter yixingensis YX-36 DSM 26809 0.21 ABZR88_RS17430 UDP-glucose/GDP-mannose dehydrogenase family protein 0.33 ABZR88_RS19050 efflux RND transporter permease subunit — —
Pedobacter sp. GW460-11-11-14-LB5 0.21 CA265_RS25420 UDP-glucose 6-dehydrogenase 0.32 CA265_RS17650 acriflavin resistance protein — —
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.3391.1 hypothetical protein 0.39 Xcc-8004.1262.1 RND multidrug efflux transporter; Acriflavin resistance protein — —
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_4043 UDP-glucose dehydrogenase 0.38 Ga0059261_3804 Cation/multidrug efflux pump — —
Lysobacter sp. OAE881 0.20 ABIE51_RS09065 UDP-glucose/GDP-mannose dehydrogenase family protein 0.39 ABIE51_RS16985 efflux RND transporter permease subunit low > 62
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS16475 UDP-glucose/GDP-mannose dehydrogenase family protein 0.32 ABI39_RS09435 efflux RND transporter permease subunit low > 72
Brevundimonas sp. GW460-12-10-14-LB2 0.20 A4249_RS02200 UDP-glucose/GDP-mannose dehydrogenase family protein 0.32 A4249_RS07780 efflux RND transporter permease subunit — —
Synechocystis sp000284455 PCC 6803 0.20 SGL_RS03275 UDP-glucose/GDP-mannose dehydrogenase family protein 0.26 SGL_RS09605 efflux RND transporter permease subunit low > 52
Parabacteroides merdae CL09T00C40 0.20 HMPREF1078_RS17435 UDP-glucose/GDP-mannose dehydrogenase family protein 0.32 HMPREF1078_RS05470 efflux RND transporter permease subunit low > 61
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_13410 UDP-glucose 6-dehydrogenase 0.32 CA264_13040 acriflavin resistance protein — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_4404 nucleotide sugar dehydrogenase 0.34 Echvi_0681 Cation/multidrug efflux pump low > 79
Erwinia amylovora T8 0.19 OLJFJH_13295 UDP-glucose 6-dehydrogenase 0.23 OLJFJH_10745 multidrug efflux RND transporter permease AcrD — —
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU1907 ugd UDP-glucose 6-dehydrogenase (TIGR) 0.24 DVU0438 AcrB/AcrD/AcrF family protein (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.19 DvMF_0282 nucleotide sugar dehydrogenase (RefSeq) 0.24 DvMF_1515 acriflavin resistance protein (RefSeq) — —
Ralstonia solanacearum PSI07 0.18 RPSI07_RS19665 UDP-glucose/GDP-mannose dehydrogenase family protein 0.22 RPSI07_RS05520 nodulation protein — —
Bacteroides stercoris CC31F 0.18 HMPREF1181_RS14375 UDP-glucose/GDP-mannose dehydrogenase family protein 0.32 HMPREF1181_RS09455 efflux RND transporter permease subunit — —
Ralstonia solanacearum UW163 0.18 UW163_RS16005 UDP-glucose/GDP-mannose dehydrogenase family protein 0.23 UW163_RS21015 nodulation protein — —
Ralstonia solanacearum IBSBF1503 0.18 RALBFv3_RS13805 UDP-glucose/GDP-mannose dehydrogenase family protein 0.23 RALBFv3_RS18115 nodulation protein — —
Bacteroides ovatus ATCC 8483 0.18 BACOVA_01736 hypothetical protein 0.32 BACOVA_03090 RND transporter, HAE1 family low > 96
Ralstonia sp. UNC404CL21Col 0.18 ABZR87_RS09495 UDP-glucose/GDP-mannose dehydrogenase family protein 0.22 ABZR87_RS19020 multidrug efflux RND transporter permease subunit — —
Erwinia tracheiphila HP pepo 2.2 0.18 IJEDHG_22700 ugd UDP-glucose 6-dehydrogenase 0.23 IJEDHG_18800 multidrug transporter subunit MdtC — —
Erwinia tracheiphila SCR3 0.18 LU632_RS12915 UDP-glucose/GDP-mannose dehydrogenase family protein 0.23 LU632_RS08690 MdtB/MuxB family multidrug efflux RND transporter permease subunit — —
Ralstonia solanacearum GMI1000 0.18 RS_RS04540 UDP-glucose/GDP-mannose dehydrogenase family protein 0.22 RS_RS22920 nodulation protein — —
Acinetobacter baumannii LAC-4 0.12 RR41_RS18535 nucleotide sugar dehydrogenase 0.24 RR41_RS03390 efflux RND transporter permease subunit low > 55

Not shown: 48 genomes with orthologs for CSW01_18075 only; 12 genomes with orthologs for CSW01_04695 only