Conservation of cofitness between CSW01_05115 and CSW01_04505 in Vibrio cholerae E7946 ATCC 55056

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05115 amidophosphoribosyltransferase 1.0 CSW01_04505 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO 0.49 1
Klebsiella pneumoniae MKP103 0.77 KDGMDA_27185 amidophosphoribosyltransferase 0.52 KDGMDA_13595 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.50 GFF25 COG1720: Uncharacterized conserved protein low > 78
Enterobacter sp. TBS_079 0.77 MPMX20_03247 Amidophosphoribosyltransferase 0.50 MPMX20_00879 tRNA (adenine(37)-N6)-methyltransferase low > 85
Klebsiella michiganensis M5al 0.77 BWI76_RS20350 amidophosphoribosyltransferase 0.51 BWI76_RS05345 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 92
Pectobacterium carotovorum WPP14 0.77 HER17_RS07020 amidophosphoribosyltransferase 0.50 HER17_RS04360 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 75
Escherichia coli ECRC99 0.77 KEDOAH_05480 purF amidophosphoribosyltransferase 0.52 KEDOAH_18085 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO — —
Escherichia coli Nissle 1917 0.77 ECOLIN_RS13405 amidophosphoribosyltransferase 0.52 ECOLIN_RS01075 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO — —
Escherichia fergusonii Becca 0.77 EFB2_01546 Amidophosphoribosyltransferase 0.51 EFB2_03848 tRNA (adenine(37)-N6)-methyltransferase low > 86
Escherichia coli ECRC100 0.77 OKFHMN_22715 purF amidophosphoribosyltransferase 0.52 OKFHMN_10070 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 79
Escherichia coli ECRC102 0.77 NIAGMN_20485 purF amidophosphoribosyltransferase 0.52 NIAGMN_07920 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 80
Escherichia coli ECRC101 0.77 MCAODC_13755 purF amidophosphoribosyltransferase 0.52 MCAODC_00585 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 87
Escherichia coli ECOR38 0.77 HEPCGN_21910 purF amidophosphoribosyltransferase 0.52 HEPCGN_08010 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 88
Escherichia coli ECRC98 0.77 JDDGAC_26675 purF amidophosphoribosyltransferase 0.52 JDDGAC_13665 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 87
Enterobacter asburiae PDN3 0.77 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) 0.52 EX28DRAFT_3783 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA low > 76
Escherichia coli ECRC62 0.77 BNILDI_13255 purF amidophosphoribosyltransferase 0.52 BNILDI_09255 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 75
Escherichia coli ECOR27 0.77 NOLOHH_14335 purF amidophosphoribosyltransferase 0.52 NOLOHH_02415 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 76
Serratia liquefaciens MT49 0.77 IAI46_17810 amidophosphoribosyltransferase 0.48 IAI46_20095 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_01393 Amidophosphoribosyltransferase 0.52 OHPLBJKB_03466 tRNA (adenine(37)-N6)-methyltransferase low > 74
Escherichia coli BL21 0.77 ECD_02237 amidophosphoribosyltransferase 0.52 ECD_00194 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase, SAM-dependent low > 61
Escherichia coli BW25113 0.77 b2312 purF amidophosphoribosyltransferase (NCBI) 0.52 b0195 yaeB hypothetical protein (NCBI) low > 76
Pantoea agglomerans CFBP13505 P0401 0.76 PagCFBP13505_RS00230 amidophosphoribosyltransferase 0.46 PagCFBP13505_RS13600 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 74
Pantoea sp. MT58 0.76 IAI47_06275 amidophosphoribosyltransferase 0.44 IAI47_15405 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 76
Dickeya dadantii 3937 0.76 DDA3937_RS14435 amidophosphoribosyltransferase 0.48 DDA3937_RS16865 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 74
Dickeya dianthicola ME23 0.76 DZA65_RS15335 amidophosphoribosyltransferase 0.49 DZA65_RS18010 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 75
Dickeya dianthicola 67-19 0.76 HGI48_RS14405 amidophosphoribosyltransferase 0.49 HGI48_RS16935 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 71
Rahnella sp. WP5 0.75 EX31_RS19570 amidophosphoribosyltransferase 0.48 EX31_RS12900 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 89
Erwinia amylovora T8 0.75 OLJFJH_11280 amidophosphoribosyltransferase 0.49 OLJFJH_00500 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 58
Erwinia tracheiphila HP pepo 2.2 0.75 IJEDHG_17915 purF amidophosphoribosyltransferase 0.45 IJEDHG_15305 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 61
Erwinia tracheiphila SCR3 0.75 LU632_RS07865 purF amidophosphoribosyltransferase 0.46 LU632_RS19840 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 73
Shewanella loihica PV-4 0.74 Shew_2302 amidophosphoribosyltransferase (RefSeq) 0.49 Shew_2589 hypothetical protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.74 Sama_2146 amidophosphoribosyltransferase (RefSeq) 0.49 Sama_1164 hypothetical protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.74 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) 0.49 SO3151 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.74 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) 0.48 Shewana3_1400 hypothetical protein (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.72 MIT1002_02524 Amidophosphoribosyltransferase 0.41 MIT1002_02772 putative tRNA (adenine(37)-N6)-methyltransferase low > 70
Marinobacter adhaerens HP15 0.63 HP15_1821 amidophosphoribosyltransferase 0.40 HP15_2414 protein containing uncharacterized protein family UPF0066 domains — —
Pseudomonas putida KT2440 0.63 PP_2000 amidophosphoribosyl transferase 0.39 PP_1189 conserved hypothetical protein low > 96
Pseudomonas sp. S08-1 0.63 OH686_04420 amidophosphoribosyltransferase 0.38 OH686_18830 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA — —
Pseudomonas segetis P6 0.63 MPMX49_03061 Amidophosphoribosyltransferase 0.37 MPMX49_03314 tRNA (adenine(37)-N6)-methyltransferase — —
Pseudomonas sp. SVBP6 0.63 COO64_RS05600 purF amidophosphoribosyltransferase 0.38 COO64_RS19980 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 93
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.38 PfGW456L13_4658 COG1720: Uncharacterized conserved protein — —
Pseudomonas sp. DMC3 0.63 GFF798 Amidophosphoribosyltransferase 0.38 GFF2121 tRNA (adenine(37)-N6)-methyltransferase low > 89
Pseudomonas sp. BP01 0.63 JOY50_RS16565 purF amidophosphoribosyltransferase 0.39 JOY50_RS01960 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO — —
Pseudomonas sp. RS175 0.63 PFR28_02811 Amidophosphoribosyltransferase 0.36 PFR28_00482 tRNA (adenine(37)-N6)-methyltransferase low > 88
Pseudomonas stutzeri RCH2 0.63 Psest_2579 amidophosphoribosyltransferase 0.38 Psest_2637 putative methyltransferase, YaeB/AF_0241 family low > 67
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_20690 amidophosphoribosyltransferase 0.38 AO353_16855 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA — —
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.36 Pf6N2E2_2982 COG1720: Uncharacterized conserved protein — —
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_21465 amidophosphoribosyltransferase 0.38 AO356_05620 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA low > 104
Pseudomonas fluorescens SBW25 0.62 PFLU_RS20515 amidophosphoribosyltransferase 0.37 PFLU_RS05930 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 109
Pseudomonas simiae WCS417 0.62 PS417_18535 amidophosphoribosyltransferase 0.37 PS417_05860 hypothetical protein — —
Pseudomonas orientalis W4I3 0.62 QF045_RS20675 amidophosphoribosyltransferase 0.37 QF045_RS08775 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 93
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS20515 amidophosphoribosyltransferase 0.37 PFLU_RS05930 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 109
Pseudomonas lactucae CFBP13502 0.62 GEMAOFIL_03935 Amidophosphoribosyltransferase 0.37 GEMAOFIL_01343 tRNA (adenine(37)-N6)-methyltransferase low > 96
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_1668 amidophosphoribosyltransferase 0.37 Psyr_1388 Protein of unknown function UPF0066 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_1668 amidophosphoribosyltransferase 0.37 Psyr_1388 Protein of unknown function UPF0066 low > 86
Pseudomonas aeruginosa PA14 0.62 IKLFDK_15815 amidophosphoribosyltransferase 0.40 IKLFDK_17390 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 98
Pseudomonas aeruginosa MRSN321 0.62 DY961_RS01385 purF;go_function=amidophosphoribosyltransferase amidophosphoribosyltransferase 0.41 DY961_RS15995 tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 100
Pseudomonas aeruginosa PUPa3 0.62 DQ20_RS34170 purF;go_function=amidophosphoribosyltransferase amidophosphoribosyltransferase 0.41 DQ20_RS41085 tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 101
Acinetobacter baumannii LAC-4 0.61 RR41_RS06350 amidophosphoribosyltransferase 0.38 RR41_RS06130 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO — —
Acinetobacter radioresistens SK82 0.60 MPMX26_01122 Amidophosphoribosyltransferase 0.36 MPMX26_02038 tRNA (adenine(37)-N6)-methyltransferase low > 36

Not shown: 56 genomes with orthologs for CSW01_05115 only; 1 genomes with orthologs for CSW01_04505 only