Conservation of cofitness between CSW01_02225 and CSW01_03840 in Vibrio cholerae E7946 ATCC 55056

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02225 arginine deiminase 1.0 CSW01_03840 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.40 12
Escherichia fergusonii Becca 0.67 EFB2_04283 Arginine deiminase 0.73 EFB2_03652 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 86
Escherichia coli Nissle 1917 0.67 ECOLIN_RS24655 arginine deiminase 0.72 ECOLIN_RS02440 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia coli ECOR38 0.67 HEPCGN_10035 arcA arginine deiminase 0.73 HEPCGN_07150 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 88
Enterobacter asburiae PDN3 0.67 EX28DRAFT_3452 arginine deiminase (EC 3.5.3.6) 0.74 EX28DRAFT_2566 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_00549 Arginine deiminase 0.74 MPMX20_00996 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF937 Arginine deiminase (EC 3.5.3.6) 0.73 GFF4304 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 78
Dickeya dianthicola ME23 0.65 DZA65_RS02045 arginine deiminase 0.72 DZA65_RS05850 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 75
Pantoea sp. MT58 0.64 IAI47_16835 arginine deiminase 0.73 IAI47_14810 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 76
Rahnella sp. WP5 0.63 EX31_RS12810 arginine deiminase 0.71 EX31_RS22090 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 89
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS33035 arginine deiminase 0.51 QEN71_RS26635 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 153
Pseudomonas stutzeri RCH2 0.45 Psest_0272 arginine deiminase 0.66 Psest_1241 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 67
Pseudomonas aeruginosa PA14 0.43 IKLFDK_27630 arginine deiminase 0.64 IKLFDK_19690 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 98
Pseudomonas aeruginosa PUPa3 0.43 DQ20_RS50395 arcA;go_function=arginine arginine deiminase 0.64 DQ20_RS43300 queA;go_function=transferase tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 101
Pseudomonas aeruginosa MRSN321 0.43 DY961_RS11705 arcA;go_function=arginine arginine deiminase 0.64 DY961_RS13800 queA;go_function=transferase tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 100
Sinorhizobium meliloti 1021 0.43 SMa0693 arginine deiminase 0.36 SMc01207 S-adenosylmethionine--tRNA ribosyltransferase-isomerase low > 103
Rhizobium sp. OAE497 0.43 ABIE40_RS23735 arginine deiminase 0.39 ABIE40_RS09430 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 107
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_05270 arginine deiminase 0.65 AO356_06695 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 104
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_2908 Arginine deiminase (EC 3.5.3.6) 0.65 Pf6N2E2_3199 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 103
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_03470 arginine deiminase 0.67 AO353_15785 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 101
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_2684 arginine deiminase 0.64 Psyr_1227 Queuosine biosynthesis protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_2684 arginine deiminase 0.64 Psyr_1227 Queuosine biosynthesis protein low > 86
Pseudomonas sp. RS175 0.41 PFR28_02178 Arginine deiminase 0.65 PFR28_00276 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Azospirillum brasilense Sp245 0.41 AZOBR_RS13255 arginine deiminase 0.42 AZOBR_RS06300 S-adenosylmethionine tRNA ribosyltransferase low > 97
Pseudomonas sp. S08-1 0.41 OH686_14340 arginine deiminase 0.67 OH686_17425 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 80
Pseudomonas sp. SVBP6 0.41 COO64_RS04480 arcA arginine deiminase 0.67 COO64_RS03845 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 93
Dinoroseobacter shibae DFL-12 0.41 Dshi_0432 Arginine deiminase (RefSeq) 0.39 Dshi_1180 Queuosine biosynthesis protein (RefSeq) low > 64
Pseudomonas sp. BP01 0.41 JOY50_RS11345 arcA arginine deiminase 0.67 JOY50_RS22870 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 84
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_1874 Arginine deiminase (EC 3.5.3.6) 0.67 PfGW456L13_4883 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.27 48
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS27680 arginine deiminase 0.50 BPHYT_RS03405 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 109
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS23970 arginine deiminase 0.66 PFLU_RS24905 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS23970 arginine deiminase 0.66 PFLU_RS24905 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 109
Pseudomonas putida KT2440 0.40 PP_1001 arginine deiminase 0.67 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.20 58
Pseudomonas orientalis W4I3 0.40 QF045_RS24455 arginine deiminase 0.67 QF045_RS25470 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 93
Pseudomonas simiae WCS417 0.40 PS417_22330 arginine deiminase 0.67 PS417_23250 S-adenosylmethionine tRNA ribosyltransferase low > 88
Pseudomonas sp. DMC3 0.40 GFF5163 Arginine deiminase 0.67 GFF4360 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 89
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_615 Arginine deiminase (EC 3.5.3.6) 0.67 Pf1N1B4_3005 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 87
Lysobacter sp. OAE881 0.39 ABIE51_RS10080 arginine deiminase 0.50 ABIE51_RS15025 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 62
Pseudomonas lactucae CFBP13502 0.39 GEMAOFIL_04602 Arginine deiminase 0.66 GEMAOFIL_04802 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 96
Marinobacter adhaerens HP15 0.38 HP15_3986 arginine deiminase 0.64 HP15_1478 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 73
Echinicola vietnamensis KMM 6221, DSM 17526 0.28 Echvi_0116 Arginine deiminase 0.40 Echvi_0042 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS10470 amidinotransferase 0.38 CA265_RS07505 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.16 ABZR88_RS06665 arginine deiminase family protein 0.39 ABZR88_RS03940 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —

Not shown: 1 genomes with orthologs for CSW01_02225 only; 77 genomes with orthologs for CSW01_03840 only