Conservation of cofitness between CSW01_07700 and CSW01_03765 in Vibrio cholerae E7946 ATCC 55056

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07700 DTW domain-containing protein 1.0 CSW01_03765 two-component system sensor histidine kinase PhoR 0.42 8
Shewanella oneidensis MR-1 0.43 SO2387 conserved hypothetical protein (NCBI ptt file) 0.48 SO1559 phoR phosphate regulon sensor protein PhoR (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.43 Shewana3_1991 DTW domain-containing protein (RefSeq) 0.49 Shewana3_2878 PAS/PAC sensor signal transduction histidine kinase (RefSeq) — —
Pseudomonas stutzeri RCH2 0.42 Psest_2866 Uncharacterized conserved protein 0.36 Psest_3846 phosphate regulon sensor kinase PhoR low > 67
Pseudomonas segetis P6 0.41 MPMX49_03326 hypothetical protein 0.40 MPMX49_00115 Phosphate regulon sensor protein PhoR low > 75
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_16830 hypothetical protein 0.37 AO353_09860 histidine kinase low > 101
Pseudomonas sp. S08-1 0.41 OH686_18230 Uncharacterized conserved protein YfiP, contains DTW domain 0.37 OH686_13460 phosphate regulon sensor kinase PhoR low > 80
Pseudomonas aeruginosa PA14 0.40 IKLFDK_18410 tRNA-uridine aminocarboxypropyltransferase 0.35 IKLFDK_26650 phosphate regulon sensor histidine kinase PhoR low > 98
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_4663 FIG074102: hypothetical protein 0.36 PfGW456L13_761 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 87
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF3576 FIG074102: hypothetical protein 0.27 GFF4236 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 90
Shewanella amazonensis SB2B 0.40 Sama_1748 hypothetical protein (RefSeq) 0.49 Sama_1075 phosphate regulon sensor protein PhoR (RefSeq) low > 62
Pseudomonas aeruginosa PUPa3 0.40 DQ20_RS42180 tRNA-uridine aminocarboxypropyltransferase 0.35 DQ20_RS49430 phoR;go_function=phosphorelay phosphate regulon sensor histidine kinase PhoR low > 101
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_3148 FIG074102: hypothetical protein 0.36 Pf1N1B4_2043 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 87
Pseudomonas sp. RS175 0.40 PFR28_00477 hypothetical protein 0.36 PFR28_04480 Phosphate regulon sensor protein PhoR low > 88
Pseudomonas aeruginosa MRSN321 0.40 DY961_RS14950 tRNA-uridine aminocarboxypropyltransferase 0.35 DY961_RS12700 phoR;go_function=phosphorelay phosphate regulon sensor histidine kinase PhoR low > 100
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_05645 hypothetical protein 0.37 AO356_11005 histidine kinase low > 104
Klebsiella michiganensis M5al 0.39 BWI76_RS21395 DTW domain-containing protein 0.58 BWI76_RS06235 PAS domain-containing sensor histidine kinase low > 92
Escherichia coli Nissle 1917 0.39 ECOLIN_RS14620 tRNA-uridine aminocarboxypropyltransferase 0.56 ECOLIN_RS02415 phosphate regulon sensor histidine kinase PhoR — —
Escherichia fergusonii Becca 0.39 EFB2_01313 hypothetical protein 0.56 EFB2_03657 Phosphate regulon sensor protein PhoR low > 86
Escherichia coli ECRC99 0.39 KEDOAH_06895 tapT tRNA-uridine aminocarboxypropyltransferase 0.56 KEDOAH_19425 phoR phosphate regulon sensor histidine kinase PhoR — —
Escherichia coli BW25113 0.39 b2583 yfiP orf, hypothetical protein (VIMSS) 0.56 b0400 phoR sensory histidine kinase in two-component regulatory system with PhoB (NCBI) low > 76
Escherichia coli ECRC101 0.39 MCAODC_11855 tapT tRNA-uridine aminocarboxypropyltransferase 0.56 MCAODC_27765 phoR phosphate regulon sensor histidine kinase PhoR low > 87
Escherichia coli ECRC100 0.39 OKFHMN_21325 tapT tRNA-uridine aminocarboxypropyltransferase 0.56 OKFHMN_08540 phoR phosphate regulon sensor histidine kinase PhoR low > 79
Escherichia coli ECRC98 0.39 JDDGAC_24990 tapT tRNA-uridine aminocarboxypropyltransferase 0.56 JDDGAC_12195 phoR phosphate regulon sensor histidine kinase PhoR low > 87
Escherichia coli ECRC102 0.39 NIAGMN_19095 tapT tRNA-uridine aminocarboxypropyltransferase 0.56 NIAGMN_06595 phoR phosphate regulon sensor histidine kinase PhoR low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_01123 hypothetical protein 0.57 OHPLBJKB_03276 Phosphate regulon sensor protein PhoR low > 74
Escherichia coli ECRC62 0.39 BNILDI_11800 tapT tRNA-uridine aminocarboxypropyltransferase 0.57 BNILDI_22885 phoR phosphate regulon sensor histidine kinase PhoR low > 75
Pseudomonas sp. DMC3 0.39 GFF2116 hypothetical protein 0.36 GFF471 Phosphate regulon sensor protein PhoR low > 89
Escherichia coli BL21 0.39 ECD_02477 DTW domain protein 0.57 ECD_00348 sensory histidine kinase in two-component regulatory system with PhoB low > 61
Enterobacter asburiae PDN3 0.39 EX28DRAFT_0064 Uncharacterized conserved protein 0.58 EX28DRAFT_2574 phosphate regulon sensor kinase PhoR low > 76
Escherichia coli ECOR27 0.39 NOLOHH_12995 tapT tRNA-uridine aminocarboxypropyltransferase 0.57 NOLOHH_01470 phoR phosphate regulon sensor histidine kinase PhoR low > 76
Escherichia coli ECOR38 0.39 HEPCGN_20450 tapT tRNA-uridine aminocarboxypropyltransferase 0.56 HEPCGN_07180 phoR phosphate regulon sensor histidine kinase PhoR low > 88
Pseudomonas orientalis W4I3 0.39 QF045_RS08750 tRNA-uridine aminocarboxypropyltransferase 0.37 QF045_RS02405 phosphate regulon sensor histidine kinase PhoR low > 93
Pseudomonas sp. BP01 0.39 JOY50_RS23805 tRNA-uridine aminocarboxypropyltransferase 0.37 JOY50_RS08895 phoR phosphate regulon sensor histidine kinase PhoR low > 84
Pseudomonas putida KT2440 0.39 PP_1634 conserved protein 0.37 PP_5321 two-component system sensory histidine kinase low > 96
Shewanella loihica PV-4 0.38 Shew_1966 DTW domain-containing protein (RefSeq) 0.50 Shew_2748 PAS/PAC sensor signal transduction histidine kinase (RefSeq) — —
Pseudomonas fluorescens SBW25 0.38 PFLU_RS05905 DTW domain-containing protein 0.37 PFLU_RS29730 phosphate regulon sensor histidine kinase PhoR low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS05905 DTW domain-containing protein 0.37 PFLU_RS29730 phosphate regulon sensor histidine kinase PhoR low > 109
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF2097 hypothetical protein 0.57 GFF4297 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 78
Acidovorax sp. GW101-3H11 0.38 Ac3H11_1285 FIG074102: hypothetical protein 0.29 Ac3H11_462 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 79
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_01338 hypothetical protein 0.37 GEMAOFIL_00076 Phosphate regulon sensor protein PhoR low > 96
Enterobacter sp. TBS_079 0.38 MPMX20_03452 hypothetical protein 0.58 MPMX20_00987 Phosphate regulon sensor protein PhoR low > 85
Pseudomonas simiae WCS417 0.37 PS417_05835 hypothetical protein 0.37 PS417_28040 histidine kinase low > 88
Pectobacterium carotovorum WPP14 0.37 HER17_RS04435 DTW domain-containing protein 0.56 HER17_RS16035 phosphate regulon sensor histidine kinase PhoR low > 75
Pseudomonas sp. SVBP6 0.37 COO64_RS19955 tRNA-uridine aminocarboxypropyltransferase 0.36 COO64_RS01675 phoR phosphate regulon sensor histidine kinase PhoR low > 93
Pantoea sp. MT58 0.37 IAI47_04480 DTW domain-containing protein 0.52 IAI47_14850 phosphate regulon sensor histidine kinase PhoR low > 76
Pantoea agglomerans CFBP13505 P0401 0.36 PagCFBP13505_RS14475 DTW domain-containing protein 0.52 PagCFBP13505_RS10300 phosphate regulon sensor histidine kinase PhoR low > 74
Klebsiella pneumoniae MKP103 0.36 KDGMDA_28520 tRNA-uridine aminocarboxypropyltransferase 0.58 KDGMDA_14310 phosphate regulon sensor histidine kinase PhoR low > 95
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_1382 DTW 0.37 Psyr_5033 PAS/PAC sensor signal transduction histidine kinase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_1382 DTW 0.37 Psyr_5033 PAS/PAC sensor signal transduction histidine kinase low > 86
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_2987 FIG074102: hypothetical protein 0.37 Pf6N2E2_4067 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 103
Alteromonas macleodii MIT1002 0.35 MIT1002_02148 hypothetical protein 0.48 MIT1002_00752 Phosphate regulon sensor protein PhoR low > 70
Dickeya dianthicola 67-19 0.35 HGI48_RS16850 DTW domain-containing protein 0.55 HGI48_RS05490 phosphate regulon sensor histidine kinase PhoR low > 71
Dickeya dianthicola ME23 0.35 DZA65_RS17925 DTW domain-containing protein 0.55 DZA65_RS05815 phosphate regulon sensor histidine kinase PhoR low > 75
Serratia liquefaciens MT49 0.35 IAI46_20020 DTW domain-containing protein 0.58 IAI46_04780 phosphate regulon sensor histidine kinase PhoR low > 87
Dickeya dadantii 3937 0.34 DDA3937_RS16780 DTW domain-containing protein 0.55 DDA3937_RS05430 phosphate regulon sensor histidine kinase PhoR low > 74
Erwinia amylovora T8 0.34 OLJFJH_09785 DTW domain-containing protein 0.54 OLJFJH_18180 phosphate regulon sensor histidine kinase PhoR low > 58
Variovorax sp. SCN45 0.33 GFF6490 Uncharacterized conserved protein YfiP, contains DTW domain 0.28 GFF1098 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) low > 127
Rahnella sp. WP5 0.33 EX31_RS13675 DTW domain-containing protein 0.54 EX31_RS22045 phosphate regulon sensor histidine kinase PhoR low > 89

Not shown: 0 genomes with orthologs for CSW01_07700 only; 27 genomes with orthologs for CSW01_03765 only