Conservation of cofitness between CSW01_07700 and CSW01_03760 in Vibrio cholerae E7946 ATCC 55056

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07700 DTW domain-containing protein 1.0 CSW01_03760 phosphate regulon transcriptional regulatory protein PhoB 0.41 12
Shewanella oneidensis MR-1 0.43 SO2387 conserved hypothetical protein (NCBI ptt file) 0.80 SO1558 phoB phosphate regulon response regulator PhoB (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.43 Shewana3_1991 DTW domain-containing protein (RefSeq) 0.79 Shewana3_2879 two component transcriptional regulator (RefSeq) — —
Pseudomonas stutzeri RCH2 0.42 Psest_2866 Uncharacterized conserved protein 0.66 Psest_3845 phosphate regulon transcriptional regulatory protein PhoB low > 67
Pseudomonas segetis P6 0.41 MPMX49_03326 hypothetical protein 0.66 MPMX49_00114 Phosphate regulon transcriptional regulatory protein PhoB low > 75
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_16830 hypothetical protein 0.66 AO353_09855 phosphate regulon transcriptional regulatory protein PhoB low > 101
Pseudomonas sp. S08-1 0.41 OH686_18230 Uncharacterized conserved protein YfiP, contains DTW domain 0.65 OH686_13465 phosphate regulon transcriptional regulatory protein PhoB low > 80
Pseudomonas aeruginosa PA14 0.40 IKLFDK_18410 tRNA-uridine aminocarboxypropyltransferase 0.65 IKLFDK_26655 phosphate regulon transcriptional regulator PhoB low > 98
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_4663 FIG074102: hypothetical protein 0.66 PfGW456L13_762 Phosphate regulon transcriptional regulatory protein PhoB (SphR) low > 87
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF3576 FIG074102: hypothetical protein 0.53 GFF63 Phosphate regulon transcriptional regulatory protein PhoB (SphR) low > 90
Shewanella amazonensis SB2B 0.40 Sama_1748 hypothetical protein (RefSeq) 0.80 Sama_1074 response regulator receiver protein (RefSeq) low > 62
Pseudomonas sp. RS175 0.40 PFR28_00477 hypothetical protein 0.66 PFR28_04479 Phosphate regulon transcriptional regulatory protein PhoB low > 88
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_3148 FIG074102: hypothetical protein 0.67 Pf1N1B4_2044 Phosphate regulon transcriptional regulatory protein PhoB (SphR) low > 87
Pseudomonas aeruginosa MRSN321 0.40 DY961_RS14950 tRNA-uridine aminocarboxypropyltransferase 0.65 DY961_RS12695 phoB;go_function=phosphorelay phosphate regulon transcriptional regulator PhoB low > 100
Pseudomonas aeruginosa PUPa3 0.40 DQ20_RS42180 tRNA-uridine aminocarboxypropyltransferase 0.65 DQ20_RS49435 phoB;go_function=phosphorelay phosphate regulon transcriptional regulator PhoB low > 101
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_05645 hypothetical protein 0.66 AO356_11000 phosphate regulon transcriptional regulatory protein PhoB low > 104
Escherichia coli Nissle 1917 0.39 ECOLIN_RS14620 tRNA-uridine aminocarboxypropyltransferase 0.85 ECOLIN_RS02410 phosphate response regulator transcription factor PhoB — —
Klebsiella michiganensis M5al 0.39 BWI76_RS21395 DTW domain-containing protein 0.83 BWI76_RS06230 DNA-binding response regulator low > 92
Escherichia fergusonii Becca 0.39 EFB2_01313 hypothetical protein 0.85 EFB2_03658 Phosphate regulon transcriptional regulatory protein PhoB low > 86
Escherichia coli ECRC99 0.39 KEDOAH_06895 tapT tRNA-uridine aminocarboxypropyltransferase 0.85 KEDOAH_19420 phoB phosphate response regulator transcription factor PhoB — —
Escherichia coli ECRC102 0.39 NIAGMN_19095 tapT tRNA-uridine aminocarboxypropyltransferase 0.85 NIAGMN_06600 phoB phosphate response regulator transcription factor PhoB low > 80
Escherichia coli ECRC98 0.39 JDDGAC_24990 tapT tRNA-uridine aminocarboxypropyltransferase 0.85 JDDGAC_12200 phoB phosphate response regulator transcription factor PhoB low > 87
Escherichia coli ECRC100 0.39 OKFHMN_21325 tapT tRNA-uridine aminocarboxypropyltransferase 0.85 OKFHMN_08545 phoB phosphate response regulator transcription factor PhoB low > 79
Escherichia coli BW25113 0.39 b2583 yfiP orf, hypothetical protein (VIMSS) 0.85 b0399 phoB DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_01123 hypothetical protein 0.85 OHPLBJKB_03277 Phosphate regulon transcriptional regulatory protein PhoB low > 74
Escherichia coli ECRC62 0.39 BNILDI_11800 tapT tRNA-uridine aminocarboxypropyltransferase 0.85 BNILDI_22890 phoB phosphate response regulator transcription factor PhoB low > 75
Escherichia coli ECRC101 0.39 MCAODC_11855 tapT tRNA-uridine aminocarboxypropyltransferase 0.85 MCAODC_27770 phoB phosphate response regulator transcription factor PhoB low > 87
Escherichia coli ECOR27 0.39 NOLOHH_12995 tapT tRNA-uridine aminocarboxypropyltransferase 0.85 NOLOHH_01475 phoB phosphate response regulator transcription factor PhoB low > 76
Escherichia coli ECOR38 0.39 HEPCGN_20450 tapT tRNA-uridine aminocarboxypropyltransferase 0.85 HEPCGN_07185 phoB phosphate response regulator transcription factor PhoB low > 88
Enterobacter asburiae PDN3 0.39 EX28DRAFT_0064 Uncharacterized conserved protein 0.84 EX28DRAFT_2575 phosphate regulon transcriptional regulatory protein PhoB low > 76
Pseudomonas sp. DMC3 0.39 GFF2116 hypothetical protein 0.67 GFF470 Phosphate regulon transcriptional regulatory protein PhoB low > 89
Escherichia coli BL21 0.39 ECD_02477 DTW domain protein 0.85 ECD_00347 response regulator in two-component regulatory system with PhoR low > 61
Pseudomonas orientalis W4I3 0.39 QF045_RS08750 tRNA-uridine aminocarboxypropyltransferase 0.66 QF045_RS02400 phosphate regulon transcriptional regulator PhoB low > 93
Pseudomonas sp. BP01 0.39 JOY50_RS23805 tRNA-uridine aminocarboxypropyltransferase 0.66 JOY50_RS08900 phoB phosphate regulon transcriptional regulator PhoB low > 84
Pseudomonas putida KT2440 0.39 PP_1634 conserved protein 0.66 PP_5320 two-component system DNA-binding transcriptional dual response regulator PhoB low > 96
Pseudomonas fluorescens SBW25 0.38 PFLU_RS05905 DTW domain-containing protein 0.66 PFLU_RS29725 phosphate regulon transcriptional regulatory protein PhoB low > 109
Shewanella loihica PV-4 0.38 Shew_1966 DTW domain-containing protein (RefSeq) 0.79 Shew_2749 two component transcriptional regulator (RefSeq) — —
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS05905 DTW domain-containing protein 0.66 PFLU_RS29725 phosphate regulon transcriptional regulatory protein PhoB low > 109
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF2097 hypothetical protein 0.85 GFF4296 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.43 24
Acidovorax sp. GW101-3H11 0.38 Ac3H11_1285 FIG074102: hypothetical protein 0.54 Ac3H11_461 Phosphate regulon transcriptional regulatory protein PhoB (SphR) low > 79
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_01338 hypothetical protein 0.66 GEMAOFIL_00075 Phosphate regulon transcriptional regulatory protein PhoB low > 96
Enterobacter sp. TBS_079 0.38 MPMX20_03452 hypothetical protein 0.84 MPMX20_00986 Phosphate regulon transcriptional regulatory protein PhoB low > 85
Pseudomonas simiae WCS417 0.37 PS417_05835 hypothetical protein 0.66 PS417_28035 transcriptional regulator PhoB low > 88
Pectobacterium carotovorum WPP14 0.37 HER17_RS04435 DTW domain-containing protein 0.85 HER17_RS16040 phosphate response regulator transcription factor PhoB low > 75
Pseudomonas sp. SVBP6 0.37 COO64_RS19955 tRNA-uridine aminocarboxypropyltransferase 0.66 COO64_RS01670 phoB phosphate regulon transcriptional regulator PhoB low > 93
Pantoea sp. MT58 0.37 IAI47_04480 DTW domain-containing protein 0.83 IAI47_14855 phosphate response regulator transcription factor PhoB low > 76
Pantoea agglomerans CFBP13505 P0401 0.36 PagCFBP13505_RS14475 DTW domain-containing protein 0.83 PagCFBP13505_RS10295 phosphate response regulator transcription factor PhoB low > 74
Klebsiella pneumoniae MKP103 0.36 KDGMDA_28520 tRNA-uridine aminocarboxypropyltransferase 0.83 KDGMDA_14305 phosphate response regulator transcription factor PhoB low > 95
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_1382 DTW 0.66 Psyr_5032 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_1382 DTW 0.66 Psyr_5032 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_2987 FIG074102: hypothetical protein 0.66 Pf6N2E2_4066 Phosphate regulon transcriptional regulatory protein PhoB (SphR) low > 103
Alteromonas macleodii MIT1002 0.35 MIT1002_02148 hypothetical protein 0.80 MIT1002_00751 Phosphate regulon transcriptional regulatory protein PhoB low > 70
Dickeya dianthicola 67-19 0.35 HGI48_RS16850 DTW domain-containing protein 0.85 HGI48_RS05485 phosphate response regulator transcription factor PhoB low > 71
Dickeya dianthicola ME23 0.35 DZA65_RS17925 DTW domain-containing protein 0.85 DZA65_RS05810 phosphate response regulator transcription factor PhoB low > 75
Serratia liquefaciens MT49 0.35 IAI46_20020 DTW domain-containing protein 0.87 IAI46_04775 phosphate response regulator transcription factor PhoB low > 87
Dickeya dadantii 3937 0.34 DDA3937_RS16780 DTW domain-containing protein 0.85 DDA3937_RS05425 phosphate response regulator transcription factor PhoB low > 74
Erwinia amylovora T8 0.34 OLJFJH_09785 DTW domain-containing protein 0.83 OLJFJH_18185 phosphate response regulator transcription factor PhoB low > 58
Variovorax sp. SCN45 0.33 GFF6490 Uncharacterized conserved protein YfiP, contains DTW domain 0.51 GFF1097 Phosphate regulon transcriptional regulatory protein PhoB (SphR) low > 127
Rahnella sp. WP5 0.33 EX31_RS13675 DTW domain-containing protein 0.87 EX31_RS22040 phosphate response regulator transcription factor PhoB low > 89

Not shown: 0 genomes with orthologs for CSW01_07700 only; 60 genomes with orthologs for CSW01_03760 only