Conservation of cofitness between CSW01_17160 and CSW01_03700 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17160 TetR/AcrR family transcriptional regulator 1.0 CSW01_03700 multi-copper polyphenol oxidoreductase 0.74 2
Shewanella loihica PV-4 0.43 Shew_2729 TetR family transcriptional regulator (RefSeq) 0.42 Shew_2949 hypothetical protein (RefSeq) — —
Shewanella sp. ANA-3 0.42 Shewana3_2864 TetR family transcriptional regulator (RefSeq) 0.42 Shewana3_3170 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.39 SO1578 transcriptional regulator, TetR family (NCBI ptt file) 0.41 SO3578 conserved hypothetical protein TIGR00726 (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.37 Sama_1089 TetR family transcriptional regulator (RefSeq) 0.41 Sama_2604 hypothetical protein (RefSeq) low > 62
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_05030 transcriptional regulator, TetR family 0.37 H281DRAFT_00849 conserved hypothetical protein — —
Rhizobium sp. OAE497 0.22 ABIE40_RS15965 TetR/AcrR family transcriptional regulator 0.27 ABIE40_RS13030 peptidoglycan editing factor PgeF low > 107
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_22630 TetR family transcriptional regulator 0.42 AO353_14225 laccase low > 101
Burkholderia phytofirmans PsJN 0.22 BPHYT_RS35800 TetR family transcriptional regulator 0.39 BPHYT_RS09140 laccase — —
Xanthobacter sp. DMC5 0.21 GFF1188 HTH-type transcriptional repressor ComR 0.28 GFF1931 Polyphenol oxidase — —
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS10085 transcriptional regulator 0.42 HSERO_RS15065 laccase low > 78
Paraburkholderia graminis OAS925 0.21 ABIE53_004482 TetR/AcrR family transcriptional repressor of nem operon 0.38 ABIE53_002063 YfiH family protein low > 113
Variovorax sp. OAS795 0.20 ABID97_RS27540 TetR/AcrR family transcriptional regulator 0.41 ABID97_RS12405 peptidoglycan editing factor PgeF — —
Dinoroseobacter shibae DFL-12 0.20 Dshi_1874 transcriptional regulator, TetR family (RefSeq) 0.24 Dshi_2651 protein of unknown function DUF152 (RefSeq) low > 64
Enterobacter sp. TBS_079 0.19 MPMX20_02130 HTH-type transcriptional repressor ComR 0.47 MPMX20_03462 Polyphenol oxidase low > 85
Rahnella sp. WP5 0.19 EX31_RS01130 TetR/AcrR family transcriptional regulator 0.42 EX31_RS07565 polyphenol oxidase low > 89
Azospirillum sp. SherDot2 0.19 MPMX19_03586 HTH-type transcriptional repressor ComR 0.23 MPMX19_01826 Polyphenol oxidase low > 112
Rhodopseudomonas palustris CGA009 0.19 TX73_015645 TetR/AcrR family transcriptional regulator 0.27 TX73_022600 peptidoglycan editing factor PgeF low > 86
Pseudomonas sp. RS175 0.18 PFR28_02070 HTH-type transcriptional repressor ComR 0.46 PFR28_03747 Polyphenol oxidase low > 88
Enterobacter asburiae PDN3 0.18 EX28DRAFT_1819 transcriptional regulator, TetR family 0.48 EX28DRAFT_2694 YfiH family protein low > 76
Sinorhizobium meliloti 1021 0.18 SMa2381 hypothetical protein 0.27 SMc02683 hypothetical protein low > 103
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF3394 putative transcriptional repressor 0.47 GFF4183 COG1496: Uncharacterized conserved protein low > 78
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS10950 TetR/AcrR family transcriptional regulator 0.35 QEN71_RS22210 peptidoglycan editing factor PgeF low > 153
Sphingomonas koreensis DSMZ 15582 0.18 Ga0059261_3383 transcriptional regulator, TetR family 0.20 Ga0059261_1457 YfiH family protein low > 68
Pantoea sp. MT58 0.18 IAI47_19875 TetR/AcrR family transcriptional regulator 0.44 IAI47_04430 polyphenol oxidase low > 76
Escherichia fergusonii Becca 0.17 EFB2_02864 HTH-type transcriptional repressor ComR 0.47 EFB2_01297 Polyphenol oxidase low > 86
Escherichia coli Nissle 1917 0.17 ECOLIN_RS06410 TetR family copper-responsive transcriptional repressor ComR 0.47 ECOLIN_RS14670 purine nucleoside phosphorylase YfiH — —
Escherichia coli BL21 0.17 ECD_01107 repressor for bhsA(ycfR) 0.47 ECD_02483 UPF0124 family protein low > 61
Escherichia coli ECOR38 0.17 HEPCGN_24000 comR TetR family copper-responsive transcriptional repressor ComR 0.47 HEPCGN_20380 yfiH purine nucleoside phosphorylase YfiH low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.16 Psyr_2927 transcriptional regulator, TetR family 0.45 Psyr_0727 Protein of unknown function DUF152 low > 86
Pseudomonas syringae pv. syringae B728a 0.16 Psyr_2927 transcriptional regulator, TetR family 0.45 Psyr_0727 Protein of unknown function DUF152 low > 86
Bosea sp. OAE506 0.16 ABIE41_RS18905 TetR/AcrR family transcriptional regulator 0.26 ABIE41_RS11450 peptidoglycan editing factor PgeF low > 77
Pseudomonas aeruginosa PA14 0.16 IKLFDK_14890 TetR family transcriptional regulator 0.46 IKLFDK_00815 peptidoglycan editing factor PgeF low > 101
Pseudomonas simiae WCS417 0.15 PS417_19005 TetR family transcriptional regulator 0.45 PS417_03825 laccase — —
Dickeya dianthicola ME23 0.12 DZA65_RS08485 TetR/AcrR family transcriptional regulator 0.49 DZA65_RS17325 polyphenol oxidase low > 75

Not shown: 2 genomes with orthologs for CSW01_17160 only; 68 genomes with orthologs for CSW01_03700 only