Conservation of cofitness between CSW01_11370 and CSW01_03435 in Vibrio cholerae E7946 ATCC 55056

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11370 acyl-CoA dehydrogenase 1.0 CSW01_03435 protease 0.60 19
Escherichia fergusonii Becca 0.69 EFB2_03796 Acyl-coenzyme A dehydrogenase 0.74 EFB2_00665 putative protease YhbU low > 86
Escherichia coli ECRC62 0.69 BNILDI_00350 fadE acyl-CoA dehydrogenase FadE 0.74 BNILDI_01555 ubiU Ubiquinone biosynthesis protein UbiU low > 75
Escherichia coli ECOR27 0.69 NOLOHH_02155 fadE acyl-CoA dehydrogenase FadE 0.74 NOLOHH_09975 ubiU Ubiquinone biosynthesis protein UbiU low > 75
Escherichia coli ECOR38 0.69 HEPCGN_07885 fadE acyl-CoA dehydrogenase FadE 0.74 HEPCGN_17050 protease low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.69 OHPLBJKB_03418 Acyl-coenzyme A dehydrogenase 0.74 OHPLBJKB_00542 putative protease YhbU low > 74
Escherichia coli BW25113 0.69 b0221 yafH putative acyl-CoA dehydrogenase (EC 1.3.99.-) (VIMSS) 0.74 b3158 yhbU predicted peptidase (collagenase-like) (NCBI) low > 76
Escherichia coli BL21 0.69 ECD_00216 acyl coenzyme A dehydrogenase 0.74 ECD_03025 U32 peptidase family protein low > 61
Escherichia coli ECRC98 0.68 JDDGAC_13405 fadE acyl-CoA dehydrogenase FadE 0.74 JDDGAC_21800 protease low > 87
Escherichia coli ECRC102 0.68 NIAGMN_07640 fadE acyl-CoA dehydrogenase FadE 0.74 NIAGMN_15935 ubiU Ubiquinone biosynthesis protein UbiU low > 80
Escherichia coli ECRC100 0.68 OKFHMN_09780 fadE acyl-CoA dehydrogenase FadE 0.74 OKFHMN_18175 protease low > 79
Escherichia coli ECRC101 0.68 MCAODC_00300 fadE acyl-CoA dehydrogenase FadE 0.74 MCAODC_08695 protease low > 87
Escherichia coli ECRC99 0.68 KEDOAH_18375 fadE acyl-CoA dehydrogenase FadE 0.74 KEDOAH_09975 protease — —
Escherichia coli Nissle 1917 0.68 ECOLIN_RS01745 acyl-CoA dehydrogenase FadE 0.74 ECOLIN_RS18140 peptidase U32 family protein low > 55
Klebsiella michiganensis M5al 0.68 BWI76_RS05470 acyl-CoA dehydrogenase 0.75 BWI76_RS24970 peptidase U32 low > 92
Rahnella sp. WP5 0.68 EX31_RS21025 acyl-CoA dehydrogenase 0.74 EX31_RS08480 U32 family peptidase low > 89
Klebsiella pneumoniae MRSN742743 0.68 KFA93_RS04550 fadE;go_function=acyl-CoA acyl-CoA dehydrogenase FadE 0.75 KFA93_RS13035 peptidase U32 family protein low > 82
Serratia liquefaciens MT49 0.68 IAI46_04335 acyl-CoA dehydrogenase 0.71 IAI46_02015 U32 family peptidase low > 87
Klebsiella pneumoniae MKP103 0.68 KDGMDA_13730 acyl-CoA dehydrogenase FadE 0.75 KDGMDA_05840 protease low > 94
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF4100 Butyryl-CoA dehydrogenase (EC 1.3.99.2) 0.74 GFF1510 FIG139552: Putative protease low > 78
Enterobacter asburiae PDN3 0.67 EX28DRAFT_2668 Acyl-CoA dehydrogenases 0.72 EX28DRAFT_3207 Collagenase and related proteases low > 76
Enterobacter sp. TBS_079 0.67 MPMX20_00910 Acyl-coenzyme A dehydrogenase 0.72 MPMX20_04062 putative protease YhbU low > 85
Shewanella oneidensis MR-1 0.67 SO2536 oxidoreductase, acyl-CoA dehydrogenase family (NCBI ptt file) 0.62 SO1249 peptidase, U32 family (NCBI ptt file) low > 76
Pantoea sp. MT58 0.67 IAI47_15195 acyl-CoA dehydrogenase 0.72 IAI47_16965 U32 family peptidase low > 76
Shewanella sp. ANA-3 0.67 Shewana3_2323 fadE acyl-CoA dehydrogenase (RefSeq) 0.62 Shewana3_1065 peptidase U32 (RefSeq) low > 73
Pectobacterium carotovorum WPP14 0.67 HER17_RS04640 acyl-CoA dehydrogenase FadE 0.74 HER17_RS18160 U32 family peptidase low > 75
Pantoea agglomerans CFBP13505 P0401 0.67 PagCFBP13516_RS15485 fadE acyl-CoA dehydrogenase FadE 0.71 PagCFBP13516_RS17185 ubiU ubiquinone anaerobic biosynthesis protein UbiU 0.73 58
Dickeya dadantii 3937 0.67 DDA3937_RS16595 acyl-CoA dehydrogenase FadE 0.73 DDA3937_RS03115 U32 family peptidase low > 74
Shewanella amazonensis SB2B 0.66 Sama_1870 fadE acyl-CoA dehydrogenase (RefSeq) 0.60 Sama_0998 U32 family peptidase (RefSeq) low > 62
Dickeya dianthicola ME23 0.66 DZA65_RS17755 acyl-CoA dehydrogenase 0.73 DZA65_RS03285 U32 family peptidase low > 75
Shewanella loihica PV-4 0.66 Shew_2108 fadE acyl-CoA dehydrogenase (RefSeq) 0.62 Shew_2787 peptidase U32 (RefSeq) low > 60
Dickeya dianthicola 67-19 0.66 HGI48_RS16665 acyl-CoA dehydrogenase FadE 0.73 HGI48_RS03290 U32 family peptidase low > 71
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_1781 Acyl-CoA dehydrogenases 0.59 B158DRAFT_2375 Collagenase and related proteases low > 40
Dechlorosoma suillum PS 0.53 Dsui_0326 acyl-CoA dehydrogenase 0.60 Dsui_0962 collagenase-like protease low > 51
Pseudomonas aeruginosa PUPa3 0.49 DQ20_RS32620 acyl-CoA dehydrogenase 0.65 DQ20_RS48610 peptidase U32 family protein low > 101
Ralstonia solanacearum GMI1000 0.49 RS_RS02685 acyl-CoA dehydrogenase 0.49 RS_RS21795 U32 family peptidase low > 80
Pseudomonas aeruginosa MRSN321 0.49 DY961_RS02975 acyl-CoA dehydrogenase 0.65 DY961_RS13305 peptidase U32 family protein low > 99
Pseudomonas aeruginosa PA14 0.49 IKLFDK_14245 acyl-CoA dehydrogenase 0.65 IKLFDK_20175 protease low > 98
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_01500 acyl-CoA dehydrogenase 0.64 AO353_22050 protease low > 101
Ralstonia solanacearum PSI07 0.49 RPSI07_RS21335 acyl-CoA dehydrogenase 0.53 RPSI07_RS06750 U32 family peptidase low > 81
Ralstonia solanacearum UW163 0.48 UW163_RS01725 acyl-CoA dehydrogenase 0.53 UW163_RS18050 protease — —
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS11865 acyl-CoA dehydrogenase 0.53 RALBFv3_RS16695 protease low > 76
Pseudomonas simiae WCS417 0.48 PS417_09185 acyl-CoA dehydrogenase 0.62 PS417_15755 protease low > 88
Pseudomonas sp. RS175 0.47 PFR28_03037 Acyl-coenzyme A dehydrogenase 0.63 PFR28_02214 putative protease YhbU low > 88
Pseudomonas stutzeri RCH2 0.47 Psest_2728 Acyl-CoA dehydrogenases 0.65 Psest_0835 Collagenase and related proteases low > 67
Pseudomonas sp. SVBP6 0.47 COO64_RS05915 acyl-CoA dehydrogenase 0.64 COO64_RS14190 peptidase U32 family protein low > 91
Pseudomonas lactucae CFBP13502 0.47 GEMAOFIL_01960 Acyl-coenzyme A dehydrogenase 0.63 GEMAOFIL_03433 putative protease YhbU low > 96
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_5924 Butyryl-CoA dehydrogenase (EC 1.3.99.2) 0.63 Pf6N2E2_721 FIG139552: Putative protease low > 103
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_480 Butyryl-CoA dehydrogenase (EC 1.3.99.2) 0.63 Pf1N1B4_5746 FIG139552: Putative protease low > 87
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_20030 acyl-CoA dehydrogenase 0.63 AO356_25160 protease low > 104
Castellaniella sp019104865 MT123 0.46 ABCV34_RS04935 acyl-CoA dehydrogenase 0.63 ABCV34_RS06420 peptidase U32 family protein low > 48

Not shown: 29 genomes with orthologs for CSW01_11370 only; 11 genomes with orthologs for CSW01_03435 only