Conservation of cofitness between CSW01_02870 and CSW01_03435 in Vibrio cholerae E7946 ATCC 55056

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02870 CinA family protein 1.0 CSW01_03435 protease 0.44 12
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF4694 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.74 GFF1510 FIG139552: Putative protease low > 78
Rahnella sp. WP5 0.50 EX31_RS07805 nicotinamide-nucleotide amidase 0.74 EX31_RS08480 U32 family peptidase low > 89
Escherichia coli ECRC98 0.49 JDDGAC_24365 pncC nicotinamide-nucleotide amidase 0.74 JDDGAC_21800 protease low > 87
Escherichia coli ECRC99 0.49 KEDOAH_07435 pncC nicotinamide-nucleotide amidase 0.74 KEDOAH_09975 protease — —
Escherichia coli ECRC62 0.49 BNILDI_11100 pncC nicotinamide-nucleotide amidase 0.74 BNILDI_01555 ubiU Ubiquinone biosynthesis protein UbiU low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_01034 Nicotinamide-nucleotide amidohydrolase PncC 0.74 OHPLBJKB_00542 putative protease YhbU low > 74
Escherichia coli ECRC102 0.49 NIAGMN_18470 pncC nicotinamide-nucleotide amidase 0.74 NIAGMN_15935 ubiU Ubiquinone biosynthesis protein UbiU low > 80
Escherichia coli ECRC100 0.49 OKFHMN_20700 pncC nicotinamide-nucleotide amidase 0.74 OKFHMN_18175 protease low > 79
Escherichia coli Nissle 1917 0.49 ECOLIN_RS15065 nicotinamide-nucleotide amidase 0.74 ECOLIN_RS18140 peptidase U32 family protein low > 55
Escherichia coli BL21 0.49 ECD_02550 nicotinamide-nucleotide amidohydrolase; NMN amidohydrolase 0.74 ECD_03025 U32 peptidase family protein low > 61
Escherichia coli ECRC101 0.49 MCAODC_11225 pncC nicotinamide-nucleotide amidase 0.74 MCAODC_08695 protease low > 88
Escherichia coli BW25113 0.49 b2700 ygaD competence damage-inducible protein A (NCBI) 0.74 b3158 yhbU predicted peptidase (collagenase-like) (NCBI) low > 76
Escherichia coli ECOR38 0.49 HEPCGN_19895 pncC nicotinamide-nucleotide amidase 0.74 HEPCGN_17050 protease low > 88
Escherichia fergusonii Becca 0.49 EFB2_01224 Nicotinamide-nucleotide amidohydrolase PncC 0.74 EFB2_00665 putative protease YhbU low > 86
Escherichia coli ECOR27 0.49 NOLOHH_12540 pncC nicotinamide-nucleotide amidase 0.74 NOLOHH_09975 ubiU Ubiquinone biosynthesis protein UbiU low > 76
Enterobacter sp. TBS_079 0.48 MPMX20_03581 Nicotinamide-nucleotide amidohydrolase PncC 0.72 MPMX20_04062 putative protease YhbU low > 85
Enterobacter asburiae PDN3 0.48 EX28DRAFT_2786 amidohydrolase, PncC family 0.72 EX28DRAFT_3207 Collagenase and related proteases low > 76
Klebsiella pneumoniae MKP103 0.48 KDGMDA_02855 nicotinamide-nucleotide amidase 0.75 KDGMDA_05840 protease low > 95
Klebsiella michiganensis M5al 0.48 BWI76_RS22185 hypothetical protein 0.75 BWI76_RS24970 peptidase U32 low > 92
Dechlorosoma suillum PS 0.48 Dsui_0710 competence/damage-inducible protein CinA-like protein 0.60 Dsui_0962 collagenase-like protease 0.79 13
Serratia liquefaciens MT49 0.47 IAI46_03835 nicotinamide-nucleotide amidase 0.71 IAI46_02015 U32 family peptidase low > 86
Dickeya dadantii 3937 0.47 DDA3937_RS16250 nicotinamide-nucleotide amidase 0.73 DDA3937_RS03115 U32 family peptidase low > 74
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS17625 damage-inducible protein CinA 0.49 RR42_RS08775 protease low > 128
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS05915 CinA family protein 0.53 RALBFv3_RS16695 protease low > 76
Ralstonia solanacearum PSI07 0.47 RPSI07_RS11330 CinA family protein 0.53 RPSI07_RS06750 U32 family peptidase — —
Pantoea agglomerans CFBP13505 P0401 0.47 PagCFBP13505_RS16675 nicotinamide-nucleotide amidase 0.71 PagCFBP13505_RS09060 U32 family peptidase low > 74
Ralstonia solanacearum UW163 0.47 UW163_RS07710 CinA family protein 0.53 UW163_RS18050 protease — —
Ralstonia solanacearum GMI1000 0.46 RS_RS13860 CinA family protein 0.49 RS_RS21795 U32 family peptidase — —
Dickeya dianthicola 67-19 0.46 HGI48_RS16360 nicotinamide-nucleotide amidase 0.73 HGI48_RS03290 U32 family peptidase low > 71
Pantoea sp. MT58 0.46 IAI47_04295 nicotinamide-nucleotide amidase 0.72 IAI47_16965 U32 family peptidase low > 76
Dickeya dianthicola ME23 0.45 DZA65_RS17455 nicotinamide-nucleotide amidase 0.73 DZA65_RS03285 U32 family peptidase low > 75
Erwinia tracheiphila SCR3 0.44 LU632_RS15740 pncC nicotinamide-nucleotide amidase 0.72 LU632_RS21005 U32 family peptidase low > 74
Erwinia tracheiphila HP pepo 2.2 0.44 IJEDHG_01630 pncC nicotinamide-nucleotide amidase 0.72 IJEDHG_14005 protease low > 61
Pectobacterium carotovorum WPP14 0.41 HER17_RS05040 nicotinamide-nucleotide amidase 0.74 HER17_RS18160 U32 family peptidase low > 75
Acidovorax sp. GW101-3H11 0.40 Ac3H11_738 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.57 Ac3H11_4294 FIG139552: Putative protease low > 79
Pseudomonas lactucae CFBP13502 0.40 GEMAOFIL_01332 Nicotinamide-nucleotide amidohydrolase PncC 0.63 GEMAOFIL_03433 putative protease YhbU low > 93
Pseudomonas simiae WCS417 0.39 PS417_05810 damage-inducible protein CinA 0.62 PS417_15755 protease low > 88
Pseudomonas aeruginosa PA14 0.38 IKLFDK_18470 damage-inducible protein CinA 0.65 IKLFDK_20175 protease low > 100
Agrobacterium fabrum C58 0.38 Atu1442 competence/damage-inducible protein CinA 0.41 Atu4397 protease low > 89
Pseudomonas sp. SVBP6 0.38 COO64_RS19925 CinA family protein 0.64 COO64_RS14190 peptidase U32 family protein low > 93
Sinorhizobium meliloti 1021 0.37 SMc01039 hypothetical protein 0.42 SMa1291 Protease low > 103
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_16800 damage-inducible protein CinA 0.64 AO353_22050 protease low > 101
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_05675 damage-inducible protein CinA 0.63 AO356_25160 protease 0.26 15
Pseudomonas stutzeri RCH2 0.37 Psest_2873 competence/damage-inducible protein CinA C-terminal domain 0.65 Psest_0835 Collagenase and related proteases low > 67
Castellaniella sp019104865 MT123 0.37 ABCV34_RS10110 CinA family protein 0.63 ABCV34_RS06420 peptidase U32 family protein low > 48
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_3142 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.63 Pf1N1B4_5746 FIG139552: Putative protease low > 87
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_1530 competence/damage-inducible protein CinA C-terminal domain 0.59 B158DRAFT_2375 Collagenase and related proteases low > 40
Pseudomonas sp. RS175 0.36 PFR28_00471 Nicotinamide-nucleotide amidohydrolase PncC 0.63 PFR28_02214 putative protease YhbU low > 88
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_2994 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.63 Pf6N2E2_721 FIG139552: Putative protease 0.45 9
Azospirillum sp. SherDot2 0.34 MPMX19_01107 Nicotinamide-nucleotide amidohydrolase PncC 0.45 MPMX19_03049 putative protease YhbU low > 112

Not shown: 39 genomes with orthologs for CSW01_02870 only; 8 genomes with orthologs for CSW01_03435 only