Conservation of cofitness between CSW01_08565 and CSW01_03285 in Vibrio cholerae E7946 ATCC 55056

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08565 hypothetical protein 1.0 CSW01_03285 AI-2E family transporter 0.62 2
Escherichia fergusonii Becca 0.80 EFB2_02674 Protein YciI 0.17 EFB2_02304 Putative transport protein YdiK low > 86
Escherichia coli BW25113 0.80 b1251 yciI orf, hypothetical protein (VIMSS) 0.17 b1688 ydiK predicted inner membrane protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.80 ECOLIN_RS07555 YciI family protein 0.17 ECOLIN_RS09435 AI-2E family transporter YdiK — —
Escherichia coli BL21 0.80 ECD_01225 putative DGPF domain-containing enzyme 0.17 ECD_01657 UPF0118 family inner membrane protein low > 61
Escherichia coli ECOR27 0.79 NOLOHH_20380 yciI YciI family protein 0.17 NOLOHH_17745 ydiK AI-2E family transporter YdiK low > 75
Escherichia coli ECRC98 0.79 JDDGAC_05905 yciI YciI family protein 0.17 JDDGAC_01800 ydiK AI-2E family transporter YdiK low > 86
Escherichia coli ECRC102 0.79 NIAGMN_27565 yciI YciI family protein 0.17 NIAGMN_00840 ydiK AI-2E family transporter YdiK — —
Escherichia coli ECRC100 0.79 OKFHMN_28670 yciI YciI family protein 0.17 OKFHMN_27225 ydiK AI-2E family transporter YdiK — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF2737 YciL protein 0.15 GFF3553 Putative membrane protein low > 78
Escherichia coli ECRC99 0.79 KEDOAH_25665 yciI YciI family protein 0.17 KEDOAH_00885 ydiK AI-2E family transporter YdiK — —
Escherichia coli ECOR38 0.79 HEPCGN_25135 yciI YciI family protein 0.17 HEPCGN_05610 ydiK AI-2E family transporter YdiK low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_02432 Protein YciI 0.17 OHPLBJKB_02036 Putative transport protein YdiK — —
Escherichia coli ECRC101 0.79 MCAODC_21590 yciI YciI family protein 0.17 MCAODC_18185 ydiK AI-2E family transporter YdiK low > 87
Enterobacter sp. TBS_079 0.79 MPMX20_02577 Protein YciI 0.23 MPMX20_00952 Putative transport protein YdiK low > 85
Shewanella sp. ANA-3 0.78 Shewana3_1504 YciI-like protein (RefSeq) 0.13 Shewana3_0477 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.78 SO3036 conserved hypothetical protein (NCBI ptt file) 0.13 SO0472 membrane protein, putative (NCBI ptt file) low > 76
Enterobacter asburiae PDN3 0.77 EX28DRAFT_0921 Uncharacterized protein conserved in bacteria 0.23 EX28DRAFT_2609 Predicted permease low > 76
Serratia liquefaciens MT49 0.76 IAI46_14115 YciI family protein 0.21 IAI46_10470 AI-2E family transporter — —
Pseudomonas simiae WCS417 0.76 PS417_22285 hypothetical protein 0.21 PS417_10400 membrane protein low > 88
Dickeya dianthicola ME23 0.75 DZA65_RS10900 YciI family protein 0.17 DZA65_RS13330 AI-2E family transporter YdiK low > 75
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS23925 YciI family protein 0.21 PFLU_RS10475 AI-2E family transporter low > 109
Klebsiella michiganensis M5al 0.75 BWI76_RS17195 hypothetical protein 0.24 BWI76_RS19855 AI-2E family transporter low > 92
Pseudomonas fluorescens SBW25 0.75 PFLU_RS23925 YciI family protein 0.21 PFLU_RS10475 AI-2E family transporter low > 109
Dickeya dadantii 3937 0.75 DDA3937_RS10420 YciI family protein 0.17 DDA3937_RS12800 AI-2E family transporter YdiK low > 74
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_18485 hypothetical protein 0.22 AO356_21305 hypothetical protein — —
Dickeya dianthicola 67-19 0.74 HGI48_RS10425 YciI family protein 0.16 HGI48_RS12865 AI-2E family transporter YdiK low > 71
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_18510 hypothetical protein 0.21 AO353_19805 hypothetical protein low > 101
Pseudomonas sp. RS175 0.74 PFR28_03321 Protein YciI 0.21 PFR28_02842 Putative transport protein YdiK low > 88
Pseudomonas sp. DMC3 0.73 GFF2397 Protein YciI 0.20 GFF1423 Putative transport protein YdiK low > 89
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_3588 YCII-related protein 0.21 Psyr_3210 Protein of unknown function UPF0118 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_3588 YCII-related protein 0.21 Psyr_3210 Protein of unknown function UPF0118 — —
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_3549 YciL protein 0.22 Pf1N1B4_3926 membrane protein, putative low > 87
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4407 YciL protein 0.21 PfGW456L13_2486 membrane protein, putative low > 87
Pseudomonas putida KT2440 0.72 PP_4502 putative enzyme 0.21 PP_2207 conserved membrane protein of unknown function low > 96
Pseudomonas sp. SVBP6 0.72 COO64_RS21765 YciI family protein 0.21 COO64_RS24345 AI-2E family transporter low > 93
Pseudomonas stutzeri RCH2 0.71 Psest_1886 Uncharacterized protein conserved in bacteria 0.24 Psest_2012 Predicted permease low > 67
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_5623 YciL protein 0.21 Pf6N2E2_46 membrane protein, putative low > 103
Dechlorosoma suillum PS 0.70 Dsui_2887 hypothetical protein 0.16 Dsui_0423 putative permease low > 51
Pantoea sp. MT58 0.70 IAI47_09125 YciI family protein 0.25 IAI47_14150 AI-2E family transporter low > 76
Erwinia tracheiphila SCR3 0.69 LU632_RS12835 YciI family protein 0.15 LU632_RS11035 ydiK AI-2E family transporter YdiK low > 74
Pseudomonas sp. S08-1 0.68 OH686_20785 YciL protein 0.22 OH686_00090 Uncharacterized UPF0118 membrane protein low > 80
Rahnella sp. WP5 0.68 EX31_RS10020 YciI family protein 0.22 EX31_RS10525 AI-2E family transporter low > 89
Pseudomonas aeruginosa PA14 0.68 IKLFDK_16275 YciI family protein 0.25 IKLFDK_13310 AI-2E family transporter low > 101
Marinobacter adhaerens HP15 0.68 HP15_2225 YciI-like protein 0.22 HP15_593 protein belonging to uncharacterized protein family UPF0118 low > 73
Erwinia amylovora T8 0.66 OLJFJH_13435 YciI family protein 0.21 OLJFJH_12970 AI-2E family transporter low > 58
Pseudomonas sp. BP01 0.63 JOY50_RS01085 YciI family protein 0.22 JOY50_RS12685 AI-2E family transporter low > 84
Acinetobacter radioresistens SK82 0.50 MPMX26_02640 Protein YciI 0.12 MPMX26_02768 Putative transport protein YdiK low > 36
Rhizobium sp. OAE497 0.33 ABIE40_RS18050 YciI-like protein 0.11 ABIE40_RS09660 AI-2E family transporter low > 107
Sinorhizobium meliloti 1021 0.32 SMc03228 YciI-like protein 0.21 SM_b21335 hypothetical protein 0.22 64

Not shown: 15 genomes with orthologs for CSW01_08565 only; 17 genomes with orthologs for CSW01_03285 only