Conservation of cofitness between CSW01_06735 and CSW01_03210 in Vibrio cholerae E7946 ATCC 55056

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06735 methylisocitrate lyase 1.0 CSW01_03210 iron ABC transporter permease 0.89 3
Marinobacter adhaerens HP15 0.68 HP15_1932 methylisocitrate lyase 2 0.46 HP15_1455 iron(III) ABC transporter, permease protein
Alteromonas macleodii MIT1002 0.67 MIT1002_03129 Methylisocitrate lyase 0.12 MIT1002_00116 Spermidine/putrescine transport system permease protein PotB low > 70
Shewanella loihica PV-4 0.67 Shew_1820 prpB 2-methylisocitrate lyase (RefSeq) 0.47 Shew_0862 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 60
Pseudomonas aeruginosa PA14 0.65 IKLFDK_03445 methylisocitrate lyase 0.28 IKLFDK_27390 iron ABC transporter permease low > 98
Pseudomonas aeruginosa MRSN321 0.65 DY961_RS08515 prpB;go_function=methylisocitrate methylisocitrate lyase 0.28 DY961_RS11950 iron ABC transporter permease low > 100
Pseudomonas aeruginosa PUPa3 0.65 DQ20_RS44335 prpB;go_function=methylisocitrate methylisocitrate lyase 0.27 DQ20_RS50165 iron ABC transporter permease low > 101
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_1343 methylisocitrate lyase 0.30 B158DRAFT_0541 ABC-type Fe3+ transport system, permease component
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_00900 2-methylisocitrate lyase 0.32 AO353_08740 iron ABC transporter permease low > 101
Pseudomonas sp. RS175 0.64 PFR28_02928 2-methylisocitrate lyase 0.31 PFR28_04317 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_20865 2-methylisocitrate lyase 0.32 AO356_13030 iron ABC transporter permease low > 104
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_6061 Methylisocitrate lyase (EC 4.1.3.30) (from data) 0.32 Pf6N2E2_4484 Ferric iron ABC transporter, permease protein low > 103
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_3819 Methylisocitrate lyase (EC 4.1.3.30) 0.32 Pf1N1B4_2233 Ferric iron ABC transporter, permease protein low > 87
Pseudomonas sp. DMC3 0.63 GFF5230 2-methylisocitrate lyase 0.30 GFF311 hypothetical protein low > 89
Pseudomonas putida KT2440 0.63 PP_2334 2-methylisocitrate lyase 0.29 PP_5195 putative Iron ABC transporter, permease protein low > 96
Pseudomonas simiae WCS417 0.63 PS417_21080 2-methylisocitrate lyase 0.31 PS417_27260 iron ABC transporter permease
Pseudomonas sp. SVBP6 0.63 COO64_RS09900 prpB methylisocitrate lyase 0.30 COO64_RS00965 iron ABC transporter permease low > 93
Pseudomonas stutzeri RCH2 0.63 Psest_2321 methylisocitrate lyase 0.27 Psest_0180 ABC-type Fe3+ transport system, permease component
Shewanella sp. ANA-3 0.63 Shewana3_3825 prpB 2-methylisocitrate lyase (RefSeq) 0.51 Shewana3_3516 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 73
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS15660 2-methylisocitrate lyase 0.24 HSERO_RS16585 iron ABC transporter permease
Pseudomonas sp. BP01 0.63 JOY50_RS25750 prpB methylisocitrate lyase 0.30 JOY50_RS22420 ABC transporter permease low > 84
Shewanella oneidensis MR-1 0.63 SO0345 prpB methylisocitrate lyase (NCBI ptt file) 0.50 SO0743 iron(III) ABC transporter, permease protein (NCBI ptt file) low > 76
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_4118 Methylisocitrate lyase (EC 4.1.3.30) 0.29 PfGW456L13_901 Ferric iron ABC transporter, permease protein low > 87
Pseudomonas orientalis W4I3 0.63 QF045_RS22905 methylisocitrate lyase 0.33 QF045_RS01630 iron ABC transporter permease low > 93
Pseudomonas lactucae CFBP13502 0.62 GEMAOFIL_04361 2-methylisocitrate lyase 0.32 GEMAOFIL_05590 hypothetical protein low > 96
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS22690 methylisocitrate lyase 0.32 PFLU_RS28920 iron ABC transporter permease low > 109
Pseudomonas fluorescens SBW25 0.62 PFLU_RS22690 methylisocitrate lyase 0.32 PFLU_RS28920 iron ABC transporter permease low > 109
Pseudomonas segetis P6 0.62 MPMX49_02628 2-methylisocitrate lyase 0.32 MPMX49_04482 hypothetical protein low > 75
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_2085 methylisocitrate lyase 0.30 Psyr_0245 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_2085 methylisocitrate lyase 0.30 Psyr_0245 Binding-protein-dependent transport systems inner membrane component low > 86
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS11260 Methylisocitrate lyase (EC 4.1.3.30) (from data) 0.36 RR42_RS04345 iron ABC transporter permease low > 128
Shewanella amazonensis SB2B 0.61 Sama_3294 prpB 2-methylisocitrate lyase (RefSeq) 0.45 Sama_0667 iron(III) ABC transporter, permease protein (RefSeq) low > 62
Castellaniella sp019104865 MT123 0.58 ABCV34_RS01670 methylisocitrate lyase 0.30 ABCV34_RS03550 iron ABC transporter permease
Pseudomonas sp. S08-1 0.56 OH686_01690 methylisocitrate lyase 0.32 OH686_11180 Ferric iron ABC transporter, permease protein low > 80
Rhodospirillum rubrum S1H 0.34 Rru_A2320 Ankyrin (NCBI) 0.38 Rru_A0768 Binding-protein-dependent transport systems inner membrane component (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.33 TX73_012370 methylisocitrate lyase 0.24 TX73_021530 iron ABC transporter permease low > 86
Variovorax sp. OAS795 0.32 ABID97_RS18835 oxaloacetate decarboxylase 0.29 ABID97_RS21260 iron ABC transporter permease low > 91
Xanthobacter sp. DMC5 0.32 GFF2763 2,3-dimethylmalate lyase 0.31 GFF360 hypothetical protein
Azospirillum sp. SherDot2 0.31 MPMX19_04657 2,3-dimethylmalate lyase 0.29 MPMX19_01379 hypothetical protein low > 112
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF3032 Methylisocitrate lyase (EC 4.1.3.30) 0.27 GFF663 Ferric iron ABC transporter, permease protein
Bosea sp. OAE506 0.29 ABIE41_RS16605 isocitrate lyase/PEP mutase family protein 0.29 ABIE41_RS15165 iron ABC transporter permease low > 77
Dinoroseobacter shibae DFL-12 0.29 Dshi_0689 isocitrate lyase family protein (RefSeq) 0.36 Dshi_2023 binding-protein-dependent transport systems inner membrane component (RefSeq)
Azospirillum brasilense Sp245 0.27 AZOBR_RS27785 carboxyvinyl-carboxyphosphonate phosphorylmutase 0.39 AZOBR_RS03155 iron ABC transporter permease low > 97
Dickeya dianthicola ME23 0.14 DZA65_RS07470 phosphoenolpyruvate mutase 0.26 DZA65_RS17205 iron ABC transporter permease low > 75
Dickeya dianthicola 67-19 0.14 HGI48_RS06990 phosphoenolpyruvate mutase 0.26 HGI48_RS16120 iron ABC transporter permease low > 71

Not shown: 31 genomes with orthologs for CSW01_06735 only; 18 genomes with orthologs for CSW01_03210 only