Conservation of cofitness between CSW01_12875 and CSW01_02500 in Vibrio cholerae E7946 ATCC 55056

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12875 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 1.0 CSW01_02500 deoxyribonuclease 0.62 5
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_03802 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.61 OHPLBJKB_00773 Endonuclease-1 low > 74
Escherichia coli BL21 0.71 ECD_04101 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.61 ECD_02775 DNA-specific endonuclease I low > 61
Escherichia coli ECOR38 0.71 HEPCGN_10140 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.61 HEPCGN_18590 endA deoxyribonuclease I low > 88
Escherichia coli ECRC62 0.71 BNILDI_07315 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.61 BNILDI_09735 endA deoxyribonuclease I low > 75
Escherichia coli ECRC99 0.71 KEDOAH_16215 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.60 KEDOAH_08855 endA deoxyribonuclease I — —
Escherichia fergusonii Becca 0.71 EFB2_04300 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.60 EFB2_00957 Endonuclease-1 low > 86
Escherichia coli ECRC100 0.71 OKFHMN_11940 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.60 OKFHMN_19285 endA deoxyribonuclease I low > 79
Escherichia coli ECRC101 0.71 MCAODC_02445 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.60 MCAODC_09805 endA deoxyribonuclease I low > 88
Escherichia coli ECRC98 0.71 JDDGAC_15580 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.60 JDDGAC_22915 endA deoxyribonuclease I low > 87
Escherichia coli ECOR27 0.71 NOLOHH_04200 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.61 NOLOHH_11155 endA deoxyribonuclease I low > 76
Escherichia coli BW25113 0.71 b4233 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (NCBI) 0.61 b2945 endA DNA-specific endonuclease I (NCBI) 0.24 35
Escherichia coli ECRC102 0.71 NIAGMN_09790 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.60 NIAGMN_17050 endA deoxyribonuclease I low > 80
Klebsiella pneumoniae MKP103 0.71 KDGMDA_11310 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.63 KDGMDA_04580 deoxyribonuclease I low > 95
Escherichia coli Nissle 1917 0.71 ECOLIN_RS24560 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.61 ECOLIN_RS16385 deoxyribonuclease I low > 55
Serratia liquefaciens MT49 0.70 IAI46_01800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.61 IAI46_21380 deoxyribonuclease I low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF881 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.61 GFF3047 Endonuclease I precursor (EC 3.1.21.1) @ Extracellular deoxyribonuclease Dns (EC 3.1.21.-) low > 78
Klebsiella michiganensis M5al 0.70 BWI76_RS02820 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.63 BWI76_RS24065 deoxyribonuclease I low > 92
Enterobacter sp. TBS_079 0.70 MPMX20_00515 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.63 MPMX20_03803 Endonuclease-1 low > 85
Enterobacter asburiae PDN3 0.69 EX28DRAFT_3420 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.62 EX28DRAFT_2983 Endonuclease I low > 76
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS11350 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.61 PagCFBP13505_RS16070 deoxyribonuclease I 0.66 10
Dickeya dadantii 3937 0.69 DDA3937_RS18580 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.61 DDA3937_RS18550 deoxyribonuclease I low > 74
Pantoea sp. MT58 0.69 IAI47_02755 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.61 IAI47_03625 deoxyribonuclease I low > 76
Pectobacterium carotovorum WPP14 0.69 HER17_RS02615 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.61 HER17_RS02645 deoxyribonuclease I low > 75
Erwinia amylovora T8 0.69 OLJFJH_02365 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.59 OLJFJH_08580 deoxyribonuclease I low > 58
Dickeya dianthicola 67-19 0.68 HGI48_RS18515 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.61 HGI48_RS18485 deoxyribonuclease I 0.71 3
Dickeya dianthicola ME23 0.68 DZA65_RS19650 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.62 DZA65_RS19620 deoxyribonuclease I 0.38 48
Erwinia tracheiphila HP pepo 2.2 0.67 IJEDHG_06780 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.57 IJEDHG_03420 endA deoxyribonuclease I — —
Shewanella amazonensis SB2B 0.67 Sama_0769 UDP-N-acetylmuramate (RefSeq) 0.55 Sama_0576 deoxyribonuclease I (RefSeq) low > 62
Rahnella sp. WP5 0.67 EX31_RS08665 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.61 EX31_RS02655 deoxyribonuclease I low > 89
Shewanella loihica PV-4 0.65 Shew_3144 UDP-N-acetylmuramate (RefSeq) 0.55 Shew_3223 deoxyribonuclease I (RefSeq) low > 60
Shewanella oneidensis MR-1 0.64 SO3805 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) 0.58 SO0833 endA endonuclease I (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.64 Shewana3_0791 UDP-N-acetylmuramate (RefSeq) 0.56 Shewana3_3443 endonuclease I (RefSeq) low > 73
Pseudomonas sp. BP01 0.64 JOY50_RS23075 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.47 JOY50_RS04250 endonuclease low > 84
Pseudomonas lactucae CFBP13502 0.63 GEMAOFIL_05114 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.48 GEMAOFIL_03914 Extracellular deoxyribonuclease low > 93
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS26735 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.49 PFLU_RS20395 deoxyribonuclease low > 109
Pseudomonas putida KT2440 0.63 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.46 PP_2451 extracellular DNA endonuclease low > 96
Pseudomonas simiae WCS417 0.63 PS417_24800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.49 PS417_18420 deoxyribonuclease low > 88
Pseudomonas fluorescens SBW25 0.63 PFLU_RS26735 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.49 PFLU_RS20395 deoxyribonuclease low > 109
Pseudomonas segetis P6 0.63 MPMX49_01032 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.45 MPMX49_01589 Nuclease NucM low > 75
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_0630 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.47 Psyr_2148 Deoxyribonuclease I low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_0630 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.47 Psyr_2148 Deoxyribonuclease I low > 86
Pseudomonas sp. SVBP6 0.63 COO64_RS15685 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.47 COO64_RS10310 endonuclease low > 93
Pseudomonas aeruginosa PA14 0.62 IKLFDK_20730 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.45 IKLFDK_13855 deoxyribonuclease low > 100
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_06550 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.48 AO353_20795 deoxyribonuclease low > 101
Pseudomonas sp. RS175 0.62 PFR28_03883 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.48 PFR28_02739 Extracellular deoxyribonuclease low > 88
Pseudomonas stutzeri RCH2 0.62 Psest_0673 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.51 Psest_1274 Endonuclease I low > 67
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_4982 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.48 Pf6N2E2_158 Endonuclease I precursor (EC 3.1.21.1) low > 103
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_1344 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.48 PfGW456L13_3916 Endonuclease I precursor (EC 3.1.21.1) low > 87
Pseudomonas sp. S08-1 0.62 OH686_09400 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.45 OH686_20125 Endonuclease I precursor low > 80
Pseudomonas sp. DMC3 0.62 GFF3860 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-m eso-2,6-diaminoheptandioate ligase 0.50 GFF893 Extracellular deoxyribonuclease low > 89
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_2676 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.48 Pf1N1B4_6039 Endonuclease I precursor (EC 3.1.21.1) — —
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_15235 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.47 AO356_00985 deoxyribonuclease low > 104

Not shown: 35 genomes with orthologs for CSW01_12875 only; 0 genomes with orthologs for CSW01_02500 only