Conservation of cofitness between CSW01_02530 and CSW01_01485 in Vibrio cholerae E7946 ATCC 55056

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02530 D-erythrose-4-phosphate dehydrogenase 1.0 CSW01_01485 transcriptional regulator 0.87 6
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF3022 D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) 0.49 GFF570 Gluconate utilization system Gnt-I transcriptional repressor low > 78
Escherichia fergusonii Becca 0.71 EFB2_00979 D-erythrose-4-phosphate dehydrogenase 0.52 EFB2_00382 HTH-type transcriptional regulator GntR low > 86
Escherichia coli BL21 0.70 ECD_02758 D-erythrose 4-phosphate dehydrogenase 0.51 ECD_03289 d-gluconate inducible gluconate regulon transcriptional repressor low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_00789 D-erythrose-4-phosphate dehydrogenase 0.52 OHPLBJKB_00264 HTH-type transcriptional regulator GntR low > 74
Escherichia coli ECOR38 0.70 HEPCGN_18695 epd erythrose-4-phosphate dehydrogenase 0.52 HEPCGN_15660 gntR gluconate operon transcriptional repressor GntR low > 88
Escherichia coli ECOR27 0.70 NOLOHH_11295 epd erythrose-4-phosphate dehydrogenase 0.51 NOLOHH_08635 gntR gluconate operon transcriptional repressor GntR low > 76
Escherichia coli ECRC101 0.70 MCAODC_09905 epd erythrose-4-phosphate dehydrogenase 0.52 MCAODC_07365 gntR gluconate operon transcriptional repressor GntR low > 87
Escherichia coli BW25113 0.70 b2927 epd D-erythrose 4-phosphate dehydrogenase (NCBI) 0.52 b3438 gntR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli ECRC100 0.70 OKFHMN_19385 epd erythrose-4-phosphate dehydrogenase 0.52 OKFHMN_16835 gntR gluconate operon transcriptional repressor GntR low > 79
Escherichia coli ECRC62 0.70 BNILDI_09835 epd erythrose-4-phosphate dehydrogenase 0.52 BNILDI_02870 gntR gluconate operon transcriptional repressor GntR low > 75
Klebsiella michiganensis M5al 0.70 BWI76_RS23985 erythrose-4-phosphate dehydrogenase 0.51 BWI76_RS26245 transcriptional regulator low > 92
Escherichia coli Nissle 1917 0.70 ECOLIN_RS16265 erythrose-4-phosphate dehydrogenase 0.52 ECOLIN_RS19675 gluconate operon transcriptional repressor GntR low > 55
Escherichia coli ECRC99 0.70 KEDOAH_08755 epd erythrose-4-phosphate dehydrogenase 0.52 KEDOAH_11305 gntR gluconate operon transcriptional repressor GntR — —
Escherichia coli ECRC98 0.70 JDDGAC_23015 epd erythrose-4-phosphate dehydrogenase 0.52 JDDGAC_20465 gntR gluconate operon transcriptional repressor GntR low > 87
Escherichia coli ECRC102 0.70 NIAGMN_17150 epd erythrose-4-phosphate dehydrogenase 0.52 NIAGMN_14605 gntR gluconate operon transcriptional repressor GntR low > 80
Enterobacter asburiae PDN3 0.70 EX28DRAFT_2973 erythrose-4-phosphate dehydrogenase 0.51 EX28DRAFT_4274 transcriptional regulator, LacI family low > 76
Enterobacter sp. TBS_079 0.70 MPMX20_03779 D-erythrose-4-phosphate dehydrogenase 0.52 MPMX20_04319 HTH-type transcriptional regulator GntR low > 85
Klebsiella pneumoniae MKP103 0.70 KDGMDA_04460 erythrose-4-phosphate dehydrogenase 0.51 KDGMDA_07120 gluconate operon transcriptional repressor GntR low > 95
Pectobacterium carotovorum WPP14 0.69 HER17_RS02685 erythrose-4-phosphate dehydrogenase 0.52 HER17_RS01450 gluconate operon transcriptional repressor GntR low > 75
Rahnella sp. WP5 0.69 EX31_RS21405 erythrose-4-phosphate dehydrogenase 0.54 EX31_RS05060 gluconate operon transcriptional repressor GntR low > 89
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS16015 erythrose-4-phosphate dehydrogenase 0.50 PagCFBP13505_RS18155 gluconate operon transcriptional repressor GntR low > 74
Pantoea sp. MT58 0.69 IAI47_03685 erythrose-4-phosphate dehydrogenase 0.52 IAI47_01650 gluconate operon transcriptional repressor GntR low > 76
Dickeya dadantii 3937 0.68 DDA3937_RS18520 erythrose-4-phosphate dehydrogenase 0.55 DDA3937_RS19785 gluconate operon transcriptional repressor GntR low > 74
Dickeya dianthicola ME23 0.68 DZA65_RS19580 erythrose-4-phosphate dehydrogenase 0.55 DZA65_RS20970 gluconate operon transcriptional repressor GntR low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS18445 erythrose-4-phosphate dehydrogenase 0.55 HGI48_RS19900 gluconate operon transcriptional repressor GntR low > 71
Erwinia amylovora T8 0.68 OLJFJH_08650 erythrose-4-phosphate dehydrogenase 0.56 OLJFJH_04280 gluconate operon transcriptional repressor GntR low > 58
Serratia liquefaciens MT49 0.67 IAI46_21015 erythrose-4-phosphate dehydrogenase 0.54 IAI46_23965 gluconate operon transcriptional repressor GntR low > 87
Alteromonas macleodii MIT1002 0.67 MIT1002_00862 D-erythrose-4-phosphate dehydrogenase 0.31 MIT1002_03475 Gluconate utilization system GNT-I transcriptional repressor — —
Erwinia tracheiphila HP pepo 2.2 0.67 IJEDHG_03375 epd erythrose-4-phosphate dehydrogenase 0.54 IJEDHG_08040 gntR gluconate operon transcriptional repressor GntR low > 61
Erwinia tracheiphila SCR3 0.67 LU632_RS05535 epd erythrose-4-phosphate dehydrogenase 0.53 LU632_RS19160 gntR gluconate operon transcriptional repressor GntR low > 73
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS27005 type I glyceraldehyde-3-phosphate dehydrogenase 0.29 QEN71_RS13585 LacI family DNA-binding transcriptional regulator low > 153
Pseudomonas sp. DMC3 0.49 GFF157 D-erythrose-4-phosphate dehydrogenase 0.33 GFF5268 HTH-type transcriptional regulator GntR — —
Pseudomonas putida KT2440 0.49 PP_4964 D-erythrose 4-phosphate dehydrogenase 0.31 PP_3415 Transcriptional regulator, LacI family low > 96
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_07950 glyceraldehyde-3-phosphate dehydrogenase 0.33 AO353_03255 LacI family transcriptional regulator — —
Pseudomonas sp. BP01 0.49 JOY50_RS09875 epd erythrose-4-phosphate dehydrogenase 0.31 JOY50_RS23605 LacI family DNA-binding transcriptional regulator — —
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_1065 D-erythrose-4-phosphate dehydrogenase 0.34 PfGW456L13_1925 Gluconate utilization system Gnt-I transcriptional repressor — —
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_13685 glyceraldehyde-3-phosphate dehydrogenase 0.34 AO356_05065 LacI family transcriptional regulator low > 104
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS16835 glyceraldehyde-3-phosphate dehydrogenase 0.32 BPHYT_RS00410 LacI family transcription regulator low > 109
Pseudomonas lactucae CFBP13502 0.49 GEMAOFIL_05419 D-erythrose-4-phosphate dehydrogenase 0.34 GEMAOFIL_04536 HTH-type transcriptional regulator GntR low > 96
Pseudomonas sp. RS175 0.49 PFR28_04187 D-erythrose-4-phosphate dehydrogenase 0.34 PFR28_00593 HTH-type transcriptional regulator GntR — —
Pseudomonas fluorescens SBW25 0.49 PFLU_RS28090 erythrose-4-phosphate dehydrogenase 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator — —
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS28090 erythrose-4-phosphate dehydrogenase 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator — —
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_06315 glyceraldehyde-3-phosphate dehydrogenase (NAD+) 0.30 H281DRAFT_05920 transcriptional regulator, LacI family low > 103
Pseudomonas simiae WCS417 0.49 PS417_26435 glyceraldehyde-3-phosphate dehydrogenase 0.33 PS417_21990 LacI family transcriptional regulator — —
Castellaniella sp019104865 MT123 0.49 ABCV34_RS15455 type I glyceraldehyde-3-phosphate dehydrogenase 0.26 ABCV34_RS12285 LacI family DNA-binding transcriptional regulator — —
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_2398 D-erythrose-4-phosphate dehydrogenase 0.35 Pf1N1B4_558 Gluconate utilization system Gnt-I transcriptional repressor — —
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_4656 D-erythrose-4-phosphate dehydrogenase 0.34 Pf6N2E2_2865 Gluconate utilization system Gnt-I transcriptional repressor — —
Pseudomonas orientalis W4I3 0.48 QF045_RS00835 erythrose-4-phosphate dehydrogenase 0.34 QF045_RS24095 LacI family DNA-binding transcriptional regulator 0.78 68
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_4791 D-erythrose-4-phosphate dehydrogenase 0.32 Psyr_3336 transcriptional regulator, LacI family low > 86
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_4791 D-erythrose-4-phosphate dehydrogenase 0.32 Psyr_3336 transcriptional regulator, LacI family — —
Pseudomonas sp. SVBP6 0.48 COO64_RS17560 epd erythrose-4-phosphate dehydrogenase 0.34 COO64_RS25590 LacI family DNA-binding transcriptional regulator — —
Pseudomonas stutzeri RCH2 0.48 Psest_0329 erythrose-4-phosphate dehydrogenase 0.34 Psest_2126 Transcriptional regulators — —
Pseudomonas segetis P6 0.48 ACVTMO_RS03245 epd erythrose-4-phosphate dehydrogenase 0.33 ACVTMO_RS11810 gntR HTH-type transcriptional regulator GntR — —
Pseudomonas aeruginosa PA14 0.48 IKLFDK_22670 erythrose-4-phosphate dehydrogenase 0.36 IKLFDK_11375 LacI family DNA-binding transcriptional regulator GntR low > 98
Pseudomonas aeruginosa PUPa3 0.48 DQ20_RS36565 epd;go_function=erythrose-4-phosphate erythrose-4-phosphate dehydrogenase 0.36 DQ20_RS59230 gntR;inference=COORDINATES LacI family DNA-binding transcriptional regulator GntR — —
Pseudomonas aeruginosa MRSN321 0.48 DY961_RS22775 epd;go_function=erythrose-4-phosphate erythrose-4-phosphate dehydrogenase 0.36 DY961_RS17990 gntR;inference=COORDINATES LacI family DNA-binding transcriptional regulator GntR low > 100
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS07125 glyceraldehyde-3-phosphate dehydrogenase 0.34 HSERO_RS05460 LacI family transcription regulator — —
Azospirillum sp. SherDot2 0.46 MPMX19_00689 Glyceraldehyde-3-phosphate dehydrogenase 1 0.29 MPMX19_05332 HTH-type transcriptional regulator GntR low > 112
Rhizobium sp. OAE497 0.46 ABIE40_RS15870 type I glyceraldehyde-3-phosphate dehydrogenase 0.25 ABIE40_RS04445 LacI family DNA-binding transcriptional regulator — —
Agrobacterium fabrum C58 0.46 Atu3737 glyceraldehyde 3-phosphate dehydrogenase 0.28 Atu4685 LacI family transcriptional regulator — —
Xanthobacter sp. DMC5 0.41 GFF89 Glyceraldehyde-3-phosphate dehydrogenase 1 0.31 GFF1533 HTH-type transcriptional regulator GntR — —

Not shown: 14 genomes with orthologs for CSW01_02530 only; 14 genomes with orthologs for CSW01_01485 only