Conservation of cofitness between CSW01_01115 and CSW01_01370 in Vibrio cholerae E7946 ATCC 55056

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01115 ribonuclease PH 1.0 CSW01_01370 mechanosensitive ion channel family protein 0.41 10
Pectobacterium carotovorum WPP14 0.76 HER17_RS20855 ribonuclease PH 0.56 HER17_RS16010 mechanosensitive ion channel low > 75
Erwinia amylovora T8 0.75 OLJFJH_05765 ribonuclease PH 0.54 OLJFJH_11020 miniconductance mechanosensitive channel low > 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.54 GFF4472 Uncharacterized protein ybdG low > 78
Enterobacter sp. TBS_079 0.74 MPMX20_00092 Ribonuclease PH 0.53 MPMX20_01129 Miniconductance mechanosensitive channel YbdG low > 85
Enterobacter asburiae PDN3 0.74 EX28DRAFT_3893 ribonuclease PH 0.53 EX28DRAFT_2431 Small-conductance mechanosensitive channel low > 76
Erwinia tracheiphila HP pepo 2.2 0.73 IJEDHG_07755 rph ribonuclease PH 0.52 IJEDHG_16880 miniconductance mechanosensitive channel low > 61
Erwinia tracheiphila SCR3 0.73 LU632_RS22020 rph ribonuclease PH 0.52 LU632_RS06755 mechanosensitive ion channel family protein low > 73
Escherichia coli ECRC102 0.73 NIAGMN_13350 rph ribonuclease PH 0.54 NIAGMN_05730 ybdG mechanosensitive ion channel YbdG low > 80
Klebsiella michiganensis M5al 0.73 BWI76_RS27390 ribonuclease PH 0.55 BWI76_RS07440 miniconductance mechanosensitive channel low > 92
Escherichia coli ECRC98 0.73 JDDGAC_19215 rph ribonuclease PH 0.54 JDDGAC_11320 ybdG mechanosensitive ion channel YbdG low > 87
Escherichia coli ECRC99 0.73 KEDOAH_12555 rph ribonuclease PH 0.54 KEDOAH_20295 ybdG mechanosensitive ion channel YbdG — —
Escherichia coli ECRC62 0.73 BNILDI_04045 rph ribonuclease PH 0.54 BNILDI_22065 ybdG mechanosensitive ion channel YbdG low > 75
Serratia liquefaciens MT49 0.73 IAI46_24850 ribonuclease PH 0.57 IAI46_04810 mechanosensitive ion channel low > 87
Escherichia coli ECOR27 0.73 NOLOHH_07470 rph ribonuclease PH 0.54 NOLOHH_24055 ybdG mechanosensitive ion channel YbdG low > 76
Escherichia fergusonii Becca 0.73 EFB2_00170 Ribonuclease PH 0.54 EFB2_03517 Miniconductance mechanosensitive channel YbdG low > 86
Escherichia coli Nissle 1917 0.73 ECOLIN_RS20755 ribonuclease PH 0.54 ECOLIN_RS03155 mechanosensitive ion channel YbdG — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00059 Ribonuclease PH 0.54 OHPLBJKB_03132 Miniconductance mechanosensitive channel YbdG low > 74
Escherichia coli BL21 0.73 ECD_03500 ribonuclease PH 0.54 ECD_00538 mechanosensitive channel protein, miniconductance low > 61
Escherichia coli ECOR38 0.73 HEPCGN_14410 rph ribonuclease PH 0.54 HEPCGN_00615 ybdG mechanosensitive ion channel YbdG low > 88
Escherichia coli ECRC101 0.73 MCAODC_06100 rph ribonuclease PH 0.54 MCAODC_26890 ybdG mechanosensitive ion channel YbdG low > 87
Escherichia coli ECRC100 0.73 OKFHMN_15590 rph ribonuclease PH 0.54 OKFHMN_07675 ybdG mechanosensitive ion channel YbdG low > 79
Klebsiella pneumoniae MKP103 0.73 KDGMDA_08055 ribonuclease PH 0.53 KDGMDA_15760 miniconductance mechanosensitive channel low > 95
Shewanella sp. ANA-3 0.71 Shewana3_3777 RNAse PH (RefSeq) 0.45 Shewana3_0117 MscS mechanosensitive ion channel (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.71 MIT1002_04071 Ribonuclease PH 0.39 MIT1002_03422 Miniconductance mechanosensitive channel low > 70
Shewanella oneidensis MR-1 0.70 SO4256 rph ribonuclease PH (NCBI ptt file) 0.45 SO0121 hypothetical Small-conductance mechanosensitive channel (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.70 Shew_3488 ribonuclease PH (RefSeq) 0.45 Shew_3752 MscS mechanosensitive ion channel (RefSeq) low > 60
Escherichia coli BW25113 0.70 b3643 rph ribonuclease PH (NCBI) 0.54 b0577 ybdG predicted mechanosensitive channel (NCBI) low > 76
Shewanella amazonensis SB2B 0.69 Sama_0320 tRNA nucleotidyltransferase (RefSeq) 0.44 Sama_3632 putative small-conductance mechanosensitive channel (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.66 B158DRAFT_0588 ribonuclease PH 0.60 B158DRAFT_2238 Small-conductance mechanosensitive channel low > 40
Acinetobacter baumannii LAC-4 0.65 RR41_RS18695 ribonuclease PH 0.41 RR41_RS07275 mechanosensitive ion channel — —
Pseudomonas aeruginosa PA14 0.65 IKLFDK_26785 ribonuclease PH 0.36 IKLFDK_17800 mechanosensitive ion channel protein MscS low > 98
Pseudomonas aeruginosa MRSN321 0.65 DY961_RS12560 rph;go_function=tRNA-specific ribonuclease PH 0.36 DY961_RS15580 mechanosensitive ion channel family protein low > 100
Pseudomonas aeruginosa PUPa3 0.65 DQ20_RS49565 rph;go_function=tRNA-specific ribonuclease PH 0.36 DQ20_RS41490 mechanosensitive ion channel family protein low > 101
Pseudomonas sp. SVBP6 0.64 COO64_RS01510 rph ribonuclease PH 0.38 COO64_RS21935 mechanosensitive ion channel family protein low > 93
Pseudomonas sp. BP01 0.64 JOY50_RS09025 rph ribonuclease PH 0.38 JOY50_RS01235 mechanosensitive ion channel family protein low > 84
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_0213 RNAse PH 0.38 Psyr_3803 MscS Mechanosensitive ion channel low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_0213 RNAse PH 0.38 Psyr_3803 MscS Mechanosensitive ion channel low > 86
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) 0.38 Pf1N1B4_544 Small-conductance mechanosensitive channel low > 87
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) 0.36 Pf6N2E2_2677 Small-conductance mechanosensitive channel low > 103
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_09260 ribonuclease PH 0.39 AO353_18300 mechanosensitive ion channel protein MscS low > 101
Acinetobacter radioresistens SK82 0.64 MPMX26_00040 Ribonuclease PH 0.39 MPMX26_01489 Miniconductance mechanosensitive channel YbdG — —
Pseudomonas putida KT2440 0.64 PP_5294 Ribonuclease PH 0.38 PP_4533 mechanosensitive channel of miniconductance low > 96
Pseudomonas lactucae CFBP13502 0.64 GEMAOFIL_00030 Ribonuclease PH 0.38 GEMAOFIL_04250 Miniconductance mechanosensitive channel YbdG low > 96
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_12500 ribonuclease PH 0.38 AO356_04215 mechanosensitive ion channel protein MscS low > 104
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) 0.39 PfGW456L13_4452 Small-conductance mechanosensitive channel low > 87
Pseudomonas sp. RS175 0.63 PFR28_04420 Ribonuclease PH 0.38 PFR28_00755 Miniconductance mechanosensitive channel YbdG low > 88
Pseudomonas orientalis W4I3 0.63 QF045_RS02165 ribonuclease PH 0.38 QF045_RS22370 mechanosensitive ion channel family protein low > 93
Pseudomonas stutzeri RCH2 0.63 Psest_3813 ribonuclease PH 0.44 Psest_1281 Small-conductance mechanosensitive channel low > 67
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS29490 ribonuclease PH 0.38 PFLU_RS22200 mechanosensitive ion channel family protein low > 109
Pseudomonas sp. DMC3 0.63 GFF415 Ribonuclease PH 0.39 GFF2354 Miniconductance mechanosensitive channel YbdG low > 89
Pseudomonas fluorescens SBW25 0.63 PFLU_RS29490 ribonuclease PH 0.38 PFLU_RS22200 mechanosensitive ion channel family protein low > 109
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS03645 ribonuclease PH 0.26 QEN71_RS37970 mechanosensitive ion channel low > 153
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS15325 ribonuclease PH 0.27 BPHYT_RS30840 small mechanosensitive ion channel protein MscS low > 109
Castellaniella sp019104865 MT123 0.57 ABCV34_RS03515 ribonuclease PH 0.37 ABCV34_RS03055 mechanosensitive ion channel domain-containing protein low > 48

Not shown: 52 genomes with orthologs for CSW01_01115 only; 9 genomes with orthologs for CSW01_01370 only