| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_07480 | | ribosomal RNA large subunit methyltransferase K/L | 1.0 | CSW01_01355 | | UDP-glucose 4-epimerase | 0.71 | 4 |
| Escherichia coli ECOR27 | 0.57 | NOLOHH_21835 | rlmKL | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.17 | NOLOHH_15730 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | low | > 76 |
| Escherichia coli ECRC99 | 0.57 | KEDOAH_22455 | rlmKL | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.16 | KEDOAH_03750 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | — | — |
| Escherichia coli ECRC101 | 0.57 | MCAODC_24670 | rlmKL | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.16 | MCAODC_20540 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | low | > 88 |
| Escherichia coli ECRC102 | 0.57 | NIAGMN_03000 | rlmKL | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.16 | NIAGMN_22345 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | low | > 80 |
| Escherichia coli ECRC100 | 0.57 | OKFHMN_05280 | rlmKL | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.16 | OKFHMN_24400 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | low | > 79 |
| Escherichia coli ECRC98 | 0.57 | JDDGAC_08890 | rlmKL | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.16 | JDDGAC_28510 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | low | > 87 |
| Dickeya dianthicola 67-19 | 0.56 | HGI48_RS12910 | | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.48 | HGI48_RS03515 | | NAD-dependent epimerase/dehydratase family protein | low | > 71 |
| Dickeya dianthicola ME23 | 0.56 | DZA65_RS13375 | | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.48 | DZA65_RS03630 | | NAD-dependent epimerase/dehydratase family protein | low | > 75 |
| Serratia liquefaciens MT49 | 0.56 | IAI46_08820 | | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.13 | IAI46_15590 | | NAD-dependent epimerase/dehydratase family protein | low | > 86 |
| Enterobacter sp. TBS_079 | 0.56 | MPMX20_01599 | | Ribosomal RNA large subunit methyltransferase K/L | 0.10 | MPMX20_01529 | | 2-alkyl-3-oxoalkanoate reductase | low | > 85 |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS12840 | | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.48 | DDA3937_RS03415 | | NAD-dependent epimerase/dehydratase family protein | low | > 74 |
| Enterobacter asburiae PDN3 | 0.55 | EX28DRAFT_1995 | | Predicted N6-adenine-specific DNA methylase | 0.30 | EX28DRAFT_0516 | | Nucleoside-diphosphate-sugar epimerases | low | > 76 |
| Rahnella sp. WP5 | 0.55 | EX31_RS18080 | | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.10 | EX31_RS18615 | | NAD(P)-dependent oxidoreductase | low | > 89 |
| Klebsiella michiganensis M5al | 0.55 | BWI76_RS09925 | | 23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))- methyltransferase | 0.09 | BWI76_RS09540 | | hypothetical protein | low | > 92 |
| Shewanella loihica PV-4 | 0.50 | Shew_1812 | | 23S rRNA m(2)G2445 methyltransferase (RefSeq) | 0.09 | Shew_1716 | | 3-beta hydroxysteroid dehydrogenase/isomerase (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.50 | Sama_1600 | rlmL | 23S rRNA m(2)G2445 methyltransferase (RefSeq) | 0.26 | Sama_2249 | | hypothetical protein (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.49 | SO1851 | | conserved hypothetical protein (NCBI ptt file) | 0.44 | SO3173 | | UDP-galactose 4-epimerase, putative (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.49 | Shewana3_1601 | rlmL | 23S rRNA m(2)G2445 methyltransferase (RefSeq) | 0.09 | Shewana3_2712 | | 3-beta hydroxysteroid dehydrogenase/isomerase (RefSeq) | low | > 73 |
| Pseudomonas stutzeri RCH2 | 0.42 | Psest_1949 | | Predicted N6-adenine-specific DNA methylase | 0.44 | Psest_1823 | | Nucleoside-diphosphate-sugar epimerases | low | > 67 |
| Pseudomonas sp. BP01 | 0.42 | JOY50_RS22095 | rlmKL | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.36 | JOY50_RS16060 | | SDR family oxidoreductase | low | > 84 |
| Pseudomonas putida KT2440 | 0.42 | PP_2096 | | fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase | 0.47 | PP_1803 | | UDP-sugar epimerase | 0.47 | 25 |
| Pseudomonas sp. SVBP6 | 0.42 | COO64_RS05295 | rlmKL | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.45 | COO64_RS06670 | | SDR family oxidoreductase | low | > 93 |
| Pseudomonas sp. DMC3 | 0.42 | GFF5254 | | Ribosomal RNA large subunit methyltransferase K/L | 0.46 | GFF4665 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | low | > 89 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_2108 | | 23S rRNA m(2)G-2445 methyltransferase | 0.42 | Psyr_3638 | | UDP-glucose 4-epimerase, putative | low | > 86 |
| Pseudomonas lactucae CFBP13502 | 0.42 | GEMAOFIL_04331 | | Ribosomal RNA large subunit methyltransferase K/L | 0.46 | GEMAOFIL_01770 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase | low | > 93 |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_2108 | | 23S rRNA m(2)G-2445 methyltransferase | 0.42 | Psyr_3638 | | UDP-glucose 4-epimerase, putative | low | > 86 |
| Pseudomonas aeruginosa PA14 | 0.42 | IKLFDK_15510 | | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.50 | IKLFDK_16015 | | NAD-dependent dehydratase | low | > 100 |
| Pseudomonas fluorescens FW300-N1B4 | 0.41 | Pf1N1B4_3844 | | 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) | 0.45 | Pf1N1B4_339 | | UDP-glucose 4-epimerase (EC 5.1.3.2) | low | > 87 |
| Pseudomonas segetis P6 | 0.41 | MPMX49_03025 | | Ribosomal RNA large subunit methyltransferase K/L | 0.49 | MPMX49_02886 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase | low | > 75 |
| Rhodanobacter sp000427505 FW510-R12 | 0.41 | LRK53_RS14000 | | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.11 | LRK53_RS12390 | | aldehyde reductase | low | > 59 |
| Pseudomonas fluorescens FW300-N2E3 | 0.41 | AO353_00775 | | 50S rRNA methyltransferase | 0.48 | AO353_01980 | | NAD-dependent dehydratase | low | > 101 |
| Pseudomonas sp. S08-1 | 0.41 | OH686_03110 | | 23S rRNA (guanine(2445)-N(2))-methyltransferase / 23S rRNA (guanine(2069)-N(7))-methyltransferase | 0.41 | OH686_20905 | | UDP-glucose 4-epimerase | low | > 80 |
| Rhodanobacter denitrificans FW104-10B01 | 0.40 | LRK54_RS14600 | | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.10 | LRK54_RS16530 | | aldehyde reductase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.40 | LRK55_RS14315 | | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.10 | LRK55_RS16255 | | aldehyde reductase | low | > 63 |
| Pseudomonas fluorescens FW300-N2C3 | 0.39 | AO356_02605 | | 50S rRNA methyltransferase | 0.36 | AO356_03355 | | hypothetical protein | low | > 104 |
| Rhodanobacter sp. FW510-T8 | 0.39 | OKGIIK_03440 | rlmKL | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.10 | OKGIIK_08255 | wcaG | Nucleoside-diphosphate-sugar epimerase | low | > 52 |
| Marinobacter adhaerens HP15 | 0.38 | HP15_1379 | | RNA methylase | 0.27 | HP15_2386 | | UDP-glucose 4-epimerase | low | > 73 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.38 | Xcc-8004.3335.1 | | 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) | 0.11 | Xcc-8004.290.1 | | NAD(P)H steroid dehydrogenase-like protein in alkane synthesis cluster | low | > 74 |
| Lysobacter sp. OAE881 | 0.37 | ABIE51_RS14475 | | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.09 | ABIE51_RS00235 | | 2-alkyl-3-oxoalkanoate reductase | low | > 62 |
Not shown: 26 genomes with orthologs for CSW01_07480 only; 25 genomes with orthologs for CSW01_01355 only