Conservation of cofitness between CSW01_14510 and CSW01_01280 in Vibrio cholerae E7946 ATCC 55056

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14510 oxidoreductase 1.0 CSW01_01280 GDP-mannose 4,6-dehydratase 0.74 19
Rahnella sp. WP5 0.49 EX31_RS06850 oxidoreductase 0.52 EX31_RS02865 GDP-mannose 4,6-dehydratase low > 89
Enterobacter asburiae PDN3 0.49 EX28DRAFT_1619 Predicted dehydrogenases and related proteins 0.83 EX28DRAFT_0502 GDP-mannose 4,6-dehydratase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF1812 Uncharacterized oxidoreductase ydgJ (EC 1.-.-.-) 0.83 GFF3875 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 78
Pantoea sp. MT58 0.48 IAI47_10370 oxidoreductase 0.11 IAI47_18500 dTDP-glucose 4,6-dehydratase
Pantoea agglomerans CFBP13505 P0401 0.48 PagCFBP13505_RS05760 oxidoreductase 0.46 PagCFBP13505_RS01140 GDP-mannose 4,6-dehydratase low > 74
Escherichia coli ECOR38 0.47 HEPCGN_05955 ydgJ Uncharacterized oxidoreductase YdgJ 0.83 HEPCGN_03045 GDP-mannose 4,6-dehydratase low > 88
Escherichia coli ECRC100 0.47 OKFHMN_27575 ydgJ Uncharacterized oxidoreductase YdgJ 0.83 OKFHMN_24440 GDP-mannose 4,6-dehydratase
Escherichia coli ECRC99 0.47 KEDOAH_00530 ydgJ Uncharacterized oxidoreductase YdgJ 0.83 KEDOAH_03710 GDP-mannose 4,6-dehydratase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_02102 putative oxidoreductase YdgJ 0.10 OHPLBJKB_04266 dTDP-glucose 4,6-dehydratase 2 low > 74
Escherichia coli ECOR27 0.47 NOLOHH_18090 ydgJ Uncharacterized oxidoreductase YdgJ 0.83 NOLOHH_15675 GDP-mannose 4,6-dehydratase low > 76
Escherichia coli ECRC98 0.47 JDDGAC_02165 ydgJ Uncharacterized oxidoreductase YdgJ 0.83 JDDGAC_28550 GDP-mannose 4,6-dehydratase
Escherichia coli ECRC101 0.47 MCAODC_17835 ydgJ Uncharacterized oxidoreductase YdgJ 0.83 MCAODC_20500 GDP-mannose 4,6-dehydratase
Escherichia coli BL21 0.47 ECD_01593 putative oxidoreductase 0.83 ECD_01959 GDP-D-mannose dehydratase, NAD(P)-binding low > 61
Escherichia coli ECRC102 0.47 NIAGMN_00490 ydgJ Uncharacterized oxidoreductase YdgJ 0.83 NIAGMN_22385 GDP-mannose 4,6-dehydratase low > 80
Escherichia coli ECRC62 0.47 BNILDI_16880 ydgJ Uncharacterized oxidoreductase YdgJ 0.83 BNILDI_14585 GDP-mannose 4,6-dehydratase low > 75
Escherichia coli Nissle 1917 0.47 ECOLIN_RS09060 oxidoreductase 0.82 ECOLIN_RS12095 GDP-mannose 4,6-dehydratase
Escherichia coli BW25113 0.47 b1624 b1624 orf, hypothetical protein (VIMSS) 0.83 b2053 gmd GDP-D-mannose dehydratase, NAD(P)-binding (NCBI) low > 76
Enterobacter sp. TBS_079 0.47 MPMX20_02014 putative oxidoreductase YdgJ 0.82 MPMX20_03035 GDP-mannose 4,6-dehydratase low > 85
Escherichia fergusonii Becca 0.47 EFB2_02368 putative oxidoreductase YdgJ 0.83 EFB2_01801 GDP-mannose 4,6-dehydratase low > 86
Dickeya dadantii 3937 0.46 DDA3937_RS10615 oxidoreductase 0.87 DDA3937_RS18665 GDP-mannose 4,6-dehydratase low > 74
Pectobacterium carotovorum WPP14 0.46 HER17_RS10790 oxidoreductase 0.78 HER17_RS14540 GDP-mannose 4,6-dehydratase low > 75
Erwinia amylovora T8 0.46 OLJFJH_14315 oxidoreductase 0.10 OLJFJH_12090 dTDP-glucose 4 6-dehydratase
Dickeya dianthicola 67-19 0.46 HGI48_RS10615 oxidoreductase 0.87 HGI48_RS18595 GDP-mannose 4,6-dehydratase low > 71
Dickeya dianthicola ME23 0.46 DZA65_RS11095 oxidoreductase 0.87 DZA65_RS19730 GDP-mannose 4,6-dehydratase 0.67 9
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS29190 oxidoreductase 0.70 QEN71_RS26360 GDP-mannose 4,6-dehydratase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_02415 Predicted dehydrogenase 0.69 H281DRAFT_04776 GDPmannose 4,6-dehydratase low > 103
Echinicola vietnamensis KMM 6221, DSM 17526 0.40 Echvi_1123 Predicted dehydrogenases and related proteins 0.66 Echvi_4398 GDP-mannose 4,6-dehydratase low > 79
Variovorax sp. SCN45 0.40 GFF1102 Uncharacterized oxidoreductase YdgJ 0.74 GFF61 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 127
Paraburkholderia graminis OAS925 0.39 ABIE53_000234 scyllo-inositol 2-dehydrogenase (NADP+) 0.68 ABIE53_000940 GDPmannose 4,6-dehydratase low > 113
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.927.1 Nucleoside-diphosphate-sugar epimerases 0.46 Xcc-8004.4503.1 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 74
Azospirillum sp. SherDot2 0.38 MPMX19_04063 scyllo-inositol 2-dehydrogenase (NADP(+)) IolW 0.63 MPMX19_06644 GDP-mannose 4,6-dehydratase low > 112
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS19310 oxidoreductase 0.69 BPHYT_RS04000 GDP-mannose 4,6-dehydratase low > 109
Pseudomonas aeruginosa PA14 0.37 IKLFDK_27750 dehydrogenase 0.39 IKLFDK_26150 GDP-mannose 4 6-dehydratase low > 100
Variovorax sp. OAS795 0.36 ABID97_RS14645 oxidoreductase 0.44 ABID97_RS05705 GDP-mannose 4,6-dehydratase low > 91
Sphingobium sp. HT1-2 0.35 GFF2029 Oxidoreductase 0.11 GFF4227 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) low > 95
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS02445 oxidoreductase 0.43 A4249_RS12980 GDP-mannose 4,6-dehydratase low > 48
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS02150 Gfo/Idh/MocA family oxidoreductase 0.63 HMPREF1078_RS00185 GDP-mannose 4,6-dehydratase low > 61
Cellulophaga baltica 18 0.34 M666_RS00210 Gfo/Idh/MocA family oxidoreductase 0.66 M666_RS03410 GDP-mannose 4,6-dehydratase low > 67
Ralstonia solanacearum PSI07 0.33 RPSI07_RS04900 oxidoreductase 0.47 RPSI07_RS19840 GDP-mannose 4,6-dehydratase low > 81
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_05525 oxidoreductase 0.66 CA264_05200 GDP-mannose 4,6-dehydratase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS22425 oxidoreductase 0.70 CA265_RS19210 GDP-mannose 4,6-dehydratase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.30 ABZR88_RS00280 Gfo/Idh/MocA family oxidoreductase 0.67 ABZR88_RS18375 GDP-mannose 4,6-dehydratase
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_4282 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) 0.39 Pf1N1B4_1965 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.23 82
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_3266 Oxidoreductase, N-terminal:Oxidoreductase, C-terminal 0.45 Psyr_0916 GDP-mannose 4,6-dehydratase low > 86
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_3266 Oxidoreductase, N-terminal:Oxidoreductase, C-terminal 0.45 Psyr_0916 GDP-mannose 4,6-dehydratase low > 86
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS12615 oxidoreductase 0.77 PFLU_RS17890 GDP-mannose 4,6-dehydratase low > 109
Pseudomonas fluorescens SBW25 0.26 PFLU_RS12615 oxidoreductase 0.77 PFLU_RS17890 GDP-mannose 4,6-dehydratase low > 109
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_21375 oxidoreductase 0.42 AO353_10245 GDP-mannose 4,6-dehydratase low > 101
Pseudomonas lactucae CFBP13502 0.25 GEMAOFIL_02657 scyllo-inositol 2-dehydrogenase (NADP(+)) IolW 0.46 GEMAOFIL_04278 GDP-mannose 4,6-dehydratase low > 93
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_23195 oxidoreductase 0.40 AO356_11835 GDP-mannose 4,6-dehydratase low > 104
Pseudomonas sp. RS175 0.24 PFR28_02419 scyllo-inositol 2-dehydrogenase (NADP(+)) IolW 0.40 PFR28_04554 GDP-mannose 4,6-dehydratase low > 88
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_519 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) 0.40 Pf6N2E2_4242 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 103
Azospirillum brasilense Sp245 0.11 AZOBR_RS29845 oxidoreductase 0.44 AZOBR_RS33465 GDP-mannose 4 6-dehydratase low > 97
Phaeobacter inhibens DSM 17395 0.10 PGA1_78p00130 putative oxidoreductase, GFO/IDH/MOCA family 0.81 PGA1_65p00310 GDP-mannose 4,6-dehydratase Gmd
Magnetospirillum magneticum AMB-1 0.10 AMB_RS00635 gfo/Idh/MocA family oxidoreductase 0.63 AMB_RS05505 GDP-mannose 4,6-dehydratase

Not shown: 11 genomes with orthologs for CSW01_14510 only; 32 genomes with orthologs for CSW01_01280 only