| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_13525 | | DNA-binding transcriptional regulator CytR | 1.0 | CSW01_01280 | | GDP-mannose 4,6-dehydratase | 0.91 | 5 |
| Rahnella sp. WP5 | 0.70 | EX31_RS14230 | | DNA-binding transcriptional regulator CytR | 0.52 | EX31_RS02865 | | GDP-mannose 4,6-dehydratase | low | > 89 |
| Enterobacter sp. TBS_079 | 0.68 | MPMX20_04535 | | HTH-type transcriptional repressor CytR | 0.82 | MPMX20_03035 | | GDP-mannose 4,6-dehydratase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.67 | EX28DRAFT_4407 | | Transcriptional regulators | 0.83 | EX28DRAFT_0502 | | GDP-mannose 4,6-dehydratase | low | > 76 |
| Escherichia coli ECRC100 | 0.67 | OKFHMN_13725 | cytR | DNA-binding transcriptional regulator CytR | 0.83 | OKFHMN_24440 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.67 | OHPLBJKB_04117 | | HTH-type transcriptional repressor CytR | 0.10 | OHPLBJKB_04266 | | dTDP-glucose 4,6-dehydratase 2 | low | > 73 |
| Escherichia coli ECOR27 | 0.67 | NOLOHH_05870 | cytR | DNA-binding transcriptional regulator CytR | 0.83 | NOLOHH_15675 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Escherichia coli ECRC98 | 0.67 | JDDGAC_17350 | cytR | DNA-binding transcriptional regulator CytR | 0.83 | JDDGAC_28550 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC101 | 0.67 | MCAODC_04225 | cytR | DNA-binding transcriptional regulator CytR | 0.83 | MCAODC_20500 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECOR38 | 0.67 | HEPCGN_12370 | cytR | DNA-binding transcriptional regulator CytR | 0.83 | HEPCGN_03045 | | GDP-mannose 4,6-dehydratase | low | > 87 |
| Escherichia coli ECRC102 | 0.67 | NIAGMN_11480 | cytR | DNA-binding transcriptional regulator CytR | 0.83 | NIAGMN_22385 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC62 | 0.67 | BNILDI_05660 | cytR | DNA-binding transcriptional regulator CytR | 0.83 | BNILDI_14585 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Escherichia coli Nissle 1917 | 0.67 | ECOLIN_RS22650 | | DNA-binding transcriptional regulator CytR | 0.82 | ECOLIN_RS12095 | | GDP-mannose 4,6-dehydratase | low | > 55 |
| Escherichia coli ECRC99 | 0.67 | KEDOAH_14435 | cytR | DNA-binding transcriptional regulator CytR | 0.83 | KEDOAH_03710 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli BW25113 | 0.67 | b3934 | cytR | DNA-binding transcriptional dual regulator (NCBI) | 0.83 | b2053 | gmd | GDP-D-mannose dehydratase, NAD(P)-binding (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.67 | ECD_03819 | | Anti-activator for CytR-CRP nucleoside utilization regulon | 0.83 | ECD_01959 | | GDP-D-mannose dehydratase, NAD(P)-binding | low | > 61 |
| Escherichia fergusonii Becca | 0.67 | EFB2_04684 | | HTH-type transcriptional repressor CytR | 0.83 | EFB2_01801 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.66 | GFF2316 | | Transcriptional (co)regulator CytR | 0.83 | GFF3875 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 78 |
| Pantoea sp. MT58 | 0.66 | IAI47_00860 | | DNA-binding transcriptional regulator CytR | 0.11 | IAI47_18500 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pectobacterium carotovorum WPP14 | 0.66 | HER17_RS00865 | | DNA-binding transcriptional regulator CytR | 0.78 | HER17_RS14540 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Erwinia amylovora T8 | 0.64 | OLJFJH_06075 | | DNA-binding transcriptional regulator CytR | 0.10 | OLJFJH_12090 | | dTDP-glucose 4 6-dehydratase | — | — |
| Dickeya dadantii 3937 | 0.61 | DDA3937_RS00930 | | DNA-binding transcriptional regulator CytR | 0.87 | DDA3937_RS18665 | | GDP-mannose 4,6-dehydratase | low | > 74 |
| Dickeya dianthicola 67-19 | 0.61 | HGI48_RS20445 | | DNA-binding transcriptional regulator CytR | 0.87 | HGI48_RS18595 | | GDP-mannose 4,6-dehydratase | 0.69 | 46 |
| Dickeya dianthicola ME23 | 0.61 | DZA65_RS21490 | | DNA-binding transcriptional regulator CytR | 0.87 | DZA65_RS19730 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Pseudomonas sp. RS175 | 0.40 | PFR28_02584 | | HTH-type transcriptional repressor CytR | 0.40 | PFR28_04554 | | GDP-mannose 4,6-dehydratase | low | > 88 |
| Agrobacterium fabrum C58 | 0.40 | Atu4373 | | LacI family transcriptional regulator | 0.59 | Atu4789 | | GDP-mannose 4,6-dehydratase | low | > 89 |
| Pseudomonas fluorescens FW300-N2C3 | 0.40 | AO356_22285 | | LacI family transcriptional regulator | 0.40 | AO356_11835 | | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.39 | Pf6N2E2_322 | | Transcriptional regulator, LacI family | 0.40 | Pf6N2E2_4242 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 103 |
| Caulobacter crescentus NA1000 | 0.39 | CCNA_01699 | | LacI-family transcriptional regulator | 0.63 | CCNA_00472 | | GDP-mannose 4,6 dehydratase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.39 | CCNA_01699 | | LacI-family transcriptional regulator | 0.63 | CCNA_00472 | | GDP-mannose 4,6 dehydratase | low | > 67 |
| Pseudomonas sp. DMC3 | 0.38 | GFF1074 | | HTH-type transcriptional repressor CytR | 0.40 | GFF545 | | GDP-mannose 4,6-dehydratase | low | > 89 |
| Pseudomonas fluorescens FW300-N1B4 | 0.38 | Pf1N1B4_4095 | | Transcriptional regulator, LacI family | 0.39 | Pf1N1B4_1965 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.36 | QEN71_RS25305 | | LacI family DNA-binding transcriptional regulator | 0.70 | QEN71_RS26360 | | GDP-mannose 4,6-dehydratase | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.35 | BPHYT_RS04680 | | LacI family transcriptional regulator | 0.69 | BPHYT_RS04000 | | GDP-mannose 4,6-dehydratase | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.34 | H281DRAFT_00103 | | transcriptional regulator, LacI family | 0.69 | H281DRAFT_04776 | | GDPmannose 4,6-dehydratase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.33 | ABIE53_001217 | | LacI family repressor for deo operon, udp, cdd, tsx, nupC, and nupG | 0.68 | ABIE53_000940 | | GDPmannose 4,6-dehydratase | low | > 113 |
| Phaeobacter inhibens DSM 17395 | 0.29 | PGA1_c07800 | | putative transcriptional regulator, lacI family | 0.81 | PGA1_65p00310 | | GDP-mannose 4,6-dehydratase Gmd | low | > 62 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.28 | Echvi_3495 | | Transcriptional regulators | 0.66 | Echvi_4398 | | GDP-mannose 4,6-dehydratase | low | > 79 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.27 | ABZR88_RS10530 | | LacI family DNA-binding transcriptional regulator | 0.67 | ABZR88_RS18375 | | GDP-mannose 4,6-dehydratase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.27 | RR42_RS27820 | | GntR family transcriptional regulator | 0.76 | RR42_RS33235 | | GDP-mannose 4,6-dehydratase | low | > 128 |
| Phocaeicola vulgatus CL09T03C04 | 0.26 | HMPREF1058_RS09530 | | LacI family DNA-binding transcriptional regulator | 0.61 | HMPREF1058_RS06615 | | GDP-mannose 4,6-dehydratase | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.26 | ABI39_RS03985 | | LacI family DNA-binding transcriptional regulator | 0.61 | ABI39_RS20410 | | GDP-mannose 4,6-dehydratase | low | > 72 |
| Xanthobacter sp. DMC5 | 0.26 | GFF4087 | | HTH-type transcriptional repressor CytR | 0.10 | GFF1115 | | dTDP-glucose 4,6-dehydratase 2 | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.26 | BT3613 | | LacI family transcriptional regulator (NCBI ptt file) | 0.60 | BT1224 | | GDP-mannose 4,6-dehydratase (NCBI ptt file) | — | — |
| Cellulophaga baltica 18 | 0.26 | M666_RS10675 | | LacI family DNA-binding transcriptional regulator | 0.66 | M666_RS03410 | | GDP-mannose 4,6-dehydratase | low | > 67 |
| Bacteroides ovatus ATCC 8483 | 0.25 | BACOVA_03411 | | sugar-binding domain protein | 0.60 | BACOVA_00511 | | GDP-mannose 4,6-dehydratase | low | > 94 |
| Rhodospirillum rubrum S1H | 0.25 | Rru_A1973 | | Transcriptional Regulator, LacI family (NCBI) | 0.63 | Rru_A0253 | | GDP-mannose 4,6-dehydratase (NCBI) | low | > 58 |
| Bacteroides stercoris CC31F | 0.24 | HMPREF1181_RS05535 | | LacI family DNA-binding transcriptional regulator | 0.60 | HMPREF1181_RS12530 | | GDP-mannose 4,6-dehydratase | low | > 56 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.24 | A4249_RS03600 | | LacI family DNA-binding transcriptional regulator | 0.43 | A4249_RS12980 | | GDP-mannose 4,6-dehydratase | low | > 48 |
| Bosea sp. OAE506 | 0.24 | ABIE41_RS20550 | | LacI family DNA-binding transcriptional regulator | 0.44 | ABIE41_RS02910 | | GDP-mannose 4,6-dehydratase | low | > 77 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.24 | Xcc-8004.1274.1 | | transcriptional regulator lacI family | 0.46 | Xcc-8004.4503.1 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 74 |
| Dinoroseobacter shibae DFL-12 | 0.24 | Dshi_2029 | | transcriptional regulator, LacI family (RefSeq) | 0.63 | Dshi_4139 | | GDP-mannose 4,6-dehydratase (RefSeq) | low | > 64 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.23 | GFF4454 | | Transcriptional regulator, LacI family | 0.78 | GFF2554 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 90 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.22 | CA265_RS24625 | | LacI family transcriptional regulator | 0.70 | CA265_RS19210 | | GDP-mannose 4,6-dehydratase | — | — |
Not shown: 12 genomes with orthologs for CSW01_13525 only; 30 genomes with orthologs for CSW01_01280 only