Conservation of cofitness between CSW01_11235 and CSW01_01280 in Vibrio cholerae E7946 ATCC 55056

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11235 chemotaxis protein CheV 1.0 CSW01_01280 GDP-mannose 4,6-dehydratase 0.84 18
Pseudomonas sp. S08-1 0.61 OH686_02985 Chemotaxis protein CheV 0.40 OH686_11980 GDP-mannose 4,6-dehydratase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_3486 Response regulator receiver:CheW-like protein 0.45 Psyr_0916 GDP-mannose 4,6-dehydratase low > 86
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_3486 Response regulator receiver:CheW-like protein 0.45 Psyr_0916 GDP-mannose 4,6-dehydratase low > 86
Pseudomonas aeruginosa PUPa3 0.58 DQ20_RS40895 chemotaxis protein CheV 0.39 DQ20_RS58005 gmd;go_function=GDP-mannose GDP-mannose 4 6-dehydratase low > 101
Pseudomonas aeruginosa MRSN321 0.58 DY961_RS00115 chemotaxis protein CheV 0.39 DY961_RS25555 gmd;go_function=GDP-mannose GDP-mannose 4 6-dehydratase low > 100
Pseudomonas aeruginosa PA14 0.58 IKLFDK_17170 chemotaxis protein 0.39 IKLFDK_26150 GDP-mannose 4 6-dehydratase low > 98
Pseudomonas fluorescens SBW25 0.57 PFLU_RS23190 chemotaxis protein CheV 0.77 PFLU_RS17890 GDP-mannose 4,6-dehydratase low > 109
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_1999 Chemotaxis protein CheV (EC 2.7.3.-) 0.40 PfGW456L13_2338 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 87
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS23190 chemotaxis protein CheV 0.77 PFLU_RS17890 GDP-mannose 4,6-dehydratase low > 109
Pseudomonas sp. SVBP6 0.57 COO64_RS21410 chemotaxis protein CheV 0.45 COO64_RS06615 gmd GDP-mannose 4,6-dehydratase low > 93
Pseudomonas lactucae CFBP13502 0.57 GEMAOFIL_04459 Chemotaxis protein CheV 0.46 GEMAOFIL_04278 GDP-mannose 4,6-dehydratase low > 96
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_3470 Chemotaxis protein CheV (EC 2.7.3.-) 0.39 Pf1N1B4_1965 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 87
Pseudomonas sp. DMC3 0.57 GFF4852 Chemotaxis protein CheV 0.40 GFF545 GDP-mannose 4,6-dehydratase low > 89
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_5692 Chemotaxis protein CheV (EC 2.7.3.-) 0.40 Pf6N2E2_4242 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 103
Pseudomonas sp. RS175 0.56 PFR28_03256 Chemotaxis protein CheV 0.40 PFR28_04554 GDP-mannose 4,6-dehydratase low > 88
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_18905 chemotaxis protein CheW 0.40 AO356_11835 GDP-mannose 4,6-dehydratase low > 104
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_02870 chemotaxis protein CheW 0.42 AO353_10245 GDP-mannose 4,6-dehydratase low > 101
Pseudomonas putida KT2440 0.56 PP_4393 putative chemotaxis protein 0.46 PP_1799 GDP-mannose 4,6-dehydratase low > 96
Pseudomonas segetis P6 0.56 ACVTMO_RS15705 chemotaxis protein CheV 0.43 ACVTMO_RS01910 gmd GDP-mannose 4,6-dehydratase 0.42 37
Pseudomonas stutzeri RCH2 0.55 Psest_2970 Chemotaxis signal transduction protein 0.83 Psest_1818 GDP-mannose 4,6-dehydratase low > 67
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.2777.1 Chemotaxis protein CheV (EC 2.7.3.-) 0.46 Xcc-8004.4503.1 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 74
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_02645 Chemotaxis protein 0.44 OKGIIK_01210 gmd GDP-mannose 4,6-dehydratase low > 53
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS13400 chemotaxis protein 0.15 LRK54_RS05640 GDP-mannose 4,6-dehydratase low > 59
Rhodanobacter denitrificans MT42 0.39 LRK55_RS13140 chemotaxis protein 0.68 LRK55_RS03650 GDP-mannose 4,6-dehydratase low > 63
Dechlorosoma suillum PS 0.32 Dsui_1717 chemotaxis signal transduction protein 0.71 Dsui_0085 GDP-mannose 4,6-dehydratase low > 51
Paraburkholderia graminis OAS925 0.32 ABIE53_001701 two-component system chemotaxis response regulator CheV 0.68 ABIE53_000940 GDPmannose 4,6-dehydratase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_04914 CheW protein 0.69 H281DRAFT_04776 GDPmannose 4,6-dehydratase — —
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS38230 chemotaxis protein 0.70 QEN71_RS26360 GDP-mannose 4,6-dehydratase low > 153
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS07045 chemotaxis protein CheV 0.69 BPHYT_RS04000 GDP-mannose 4,6-dehydratase low > 109
Enterobacter sp. TBS_079 0.31 MPMX20_03205 Chemotaxis protein CheV 0.82 MPMX20_03035 GDP-mannose 4,6-dehydratase low > 85
Pectobacterium carotovorum WPP14 0.31 HER17_RS13880 chemotaxis protein 0.78 HER17_RS14540 GDP-mannose 4,6-dehydratase low > 75
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS27090 chemotaxis protein CheV 0.76 RR42_RS33235 GDP-mannose 4,6-dehydratase low > 128
Enterobacter asburiae PDN3 0.31 EX28DRAFT_0335 Chemotaxis signal transduction protein 0.83 EX28DRAFT_0502 GDP-mannose 4,6-dehydratase low > 76
Rahnella sp. WP5 0.30 EX31_RS11205 chemotaxis protein CheV 0.52 EX31_RS02865 GDP-mannose 4,6-dehydratase low > 89
Pantoea agglomerans CFBP13505 P0401 0.30 PagCFBP13505_RS10095 chemotaxis protein CheV 0.46 PagCFBP13505_RS01140 GDP-mannose 4,6-dehydratase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF1876 Chemotaxis protein CheV (EC 2.7.3.-) 0.83 GFF3875 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 78
Dickeya dadantii 3937 0.29 DDA3937_RS08090 chemotaxis protein CheV 0.87 DDA3937_RS18665 GDP-mannose 4,6-dehydratase low > 74
Castellaniella sp019104865 MT123 0.29 ABCV34_RS04825 chemotaxis protein 0.71 ABCV34_RS12935 GDP-mannose 4,6-dehydratase — —
Erwinia amylovora T8 0.28 OLJFJH_15340 chemotaxis protein CheV 0.10 OLJFJH_12090 dTDP-glucose 4 6-dehydratase — —
Dickeya dianthicola ME23 0.28 DZA65_RS08410 chemotaxis protein CheV 0.87 DZA65_RS19730 GDP-mannose 4,6-dehydratase low > 75
Dickeya dianthicola 67-19 0.28 HGI48_RS07815 chemotaxis protein CheW 0.87 HGI48_RS18595 GDP-mannose 4,6-dehydratase low > 71

Not shown: 15 genomes with orthologs for CSW01_11235 only; 48 genomes with orthologs for CSW01_01280 only