Conservation of cofitness between CSW01_13620 and CSW01_01245 in Vibrio cholerae E7946 ATCC 55056

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13620 aspartate ammonia-lyase 1.0 CSW01_01245 lipopolysaccharide heptosyltransferase II 0.68 10
Rahnella sp. WP5 0.77 EX31_RS08965 aspartate ammonia-lyase 0.50 EX31_RS14400 ADP-heptose--LPS heptosyltransferase RfaF low > 89
Escherichia coli ECRC99 0.75 KEDOAH_15735 aspA aspartate ammonia-lyase 0.50 KEDOAH_12455 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_03904 Aspartate ammonia-lyase 0.50 OHPLBJKB_00080 ADP-heptose--LPS heptosyltransferase 2 — —
Escherichia coli ECRC62 0.75 BNILDI_06795 aspA aspartate ammonia-lyase 0.50 BNILDI_03935 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli BL21 0.75 ECD_04009 aspartate ammonia-lyase 0.50 ECD_03477 ADP-heptose:LPS heptosyltransferase II — —
Escherichia coli BW25113 0.75 b4139 aspA aspartate ammonia-lyase (aspartase) (VIMSS) 0.50 b3620 rfaF ADP-heptose:LPS heptosyltransferase II (NCBI) 0.27 69
Escherichia coli ECRC98 0.75 JDDGAC_16065 aspA aspartate ammonia-lyase 0.50 JDDGAC_19320 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 87
Escherichia coli ECRC100 0.75 OKFHMN_12430 aspA aspartate ammonia-lyase 0.50 OKFHMN_15695 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 79
Escherichia coli ECRC101 0.75 MCAODC_02940 aspA aspartate ammonia-lyase 0.50 MCAODC_06205 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli ECRC102 0.75 NIAGMN_10275 aspA aspartate ammonia-lyase 0.50 NIAGMN_13455 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 80
Escherichia coli ECOR38 0.75 HEPCGN_10655 aspA aspartate ammonia-lyase 0.50 HEPCGN_14540 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 88
Escherichia coli ECOR27 0.75 NOLOHH_04695 aspA aspartate ammonia-lyase 0.50 NOLOHH_07575 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 76
Escherichia coli Nissle 1917 0.75 ECOLIN_RS24045 aspartate ammonia-lyase 0.50 ECOLIN_RS20650 ADP-heptose--LPS heptosyltransferase RfaF low > 55
Escherichia fergusonii Becca 0.75 EFB2_04396 Aspartate ammonia-lyase 0.50 EFB2_00191 ADP-heptose--LPS heptosyltransferase 2 — —
Pectobacterium carotovorum WPP14 0.75 HER17_RS19355 aspartate ammonia-lyase 0.51 HER17_RS20775 ADP-heptose--LPS heptosyltransferase RfaF 0.84 5
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF2013 Aspartate ammonia-lyase (EC 4.3.1.1) 0.50 GFF391 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) low > 78
Erwinia amylovora T8 0.75 OLJFJH_02615 aspartate ammonia-lyase 0.49 OLJFJH_05880 ADP-heptose--LPS heptosyltransferase RfaF — —
Enterobacter asburiae PDN3 0.75 EX28DRAFT_3336 aspartate ammonia-lyase 0.50 EX28DRAFT_3872 lipopolysaccharide heptosyltransferase II — —
Enterobacter sp. TBS_079 0.75 MPMX20_00419 Aspartate ammonia-lyase 0.49 MPMX20_00113 ADP-heptose--LPS heptosyltransferase 2 — —
Klebsiella pneumoniae MKP103 0.75 KDGMDA_10820 aspartate ammonia-lyase 0.45 KDGMDA_07950 ADP-heptose--LPS heptosyltransferase RfaF low > 95
Serratia liquefaciens MT49 0.75 IAI46_01480 aspartate ammonia-lyase 0.49 IAI46_24740 ADP-heptose--LPS heptosyltransferase RfaF — —
Klebsiella michiganensis M5al 0.74 BWI76_RS02330 aspartate ammonia-lyase 0.49 BWI76_RS27265 ADP-heptose--LPS heptosyltransferase II — —
Pantoea agglomerans CFBP13505 P0401 0.74 PagCFBP13505_RS09490 aspartate ammonia-lyase 0.48 PagCFBP13505_RS18660 ADP-heptose--LPS heptosyltransferase RfaF — —
Pantoea sp. MT58 0.74 IAI47_17320 aspartate ammonia-lyase 0.48 IAI47_00685 ADP-heptose--LPS heptosyltransferase RfaF — —
Dickeya dadantii 3937 0.73 DDA3937_RS02720 aspartate ammonia-lyase 0.50 DDA3937_RS20445 ADP-heptose--LPS heptosyltransferase RfaF — —
Dickeya dianthicola 67-19 0.73 HGI48_RS02695 aspartate ammonia-lyase 0.49 HGI48_RS00765 ADP-heptose--LPS heptosyltransferase RfaF — —
Dickeya dianthicola ME23 0.73 DZA65_RS02850 aspartate ammonia-lyase 0.49 DZA65_RS00820 ADP-heptose--LPS heptosyltransferase RfaF — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.55 CA264_18450 aspartate ammonia-lyase 0.13 CA264_20400 heptosyltransferase low > 74
Dechlorosoma suillum PS 0.54 Dsui_3481 aspartate ammonia-lyase 0.39 Dsui_3341 lipopolysaccharide heptosyltransferase II — —
Azospirillum sp. SherDot2 0.53 MPMX19_03594 Aspartate ammonia-lyase 0.09 MPMX19_04967 ADP-heptose--LPS heptosyltransferase 2 — —
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS26135 aspartate ammonia-lyase 0.39 RR42_RS03165 ADP-heptose--LPS heptosyltransferase — —
Pseudomonas sp. S08-1 0.52 OH686_13315 Aspartate ammonia-lyase 0.53 OH686_09690 lipopolysaccharide heptosyltransferase II — —
Pseudomonas aeruginosa PUPa3 0.52 DQ20_RS57875 aspA;go_function=aspartate aspartate ammonia-lyase 0.51 DQ20_RS51195 waaF;go_function=lipopolysaccharide lipopolysaccharide heptosyltransferase II — —
Pseudomonas aeruginosa MRSN321 0.52 DY961_RS25420 aspA;go_function=aspartate aspartate ammonia-lyase 0.51 DY961_RS10865 waaF;go_function=lipopolysaccharide lipopolysaccharide heptosyltransferase II — —
Pseudomonas aeruginosa PA14 0.52 IKLFDK_26280 aspartate ammonia-lyase 0.51 IKLFDK_28475 heptosyltransferase I — —
Pseudomonas sp. SVBP6 0.51 COO64_RS01760 aspA aspartate ammonia-lyase 0.54 COO64_RS22830 waaF lipopolysaccharide heptosyltransferase II — —
Pseudomonas putida KT2440 0.51 PP_5338 aspartate ammonia-lyase 0.55 PP_0341 ADP-heptose:LPS heptosyltransferase II — —
Pseudomonas sp. BP01 0.51 JOY50_RS08810 aspA aspartate ammonia-lyase 0.54 JOY50_RS17820 waaF lipopolysaccharide heptosyltransferase II — —
Pseudomonas sp. RS175 0.51 PFR28_04498 Aspartate ammonia-lyase 0.53 PFR28_05063 ADP-heptose--LPS heptosyltransferase 2 — —
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_2025 Aspartate ammonia-lyase (EC 4.3.1.1) 0.53 Pf1N1B4_1473 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) — —
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS33820 aspartate ammonia-lyase 0.38 QEN71_RS02400 lipopolysaccharide heptosyltransferase II — —
Pseudomonas lactucae CFBP13502 0.51 GEMAOFIL_00092 Aspartate ammonia-lyase 0.53 GEMAOFIL_00682 ADP-heptose--LPS heptosyltransferase 2 — —
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_4085 Aspartate ammonia-lyase (EC 4.3.1.1) 0.54 Pf6N2E2_3671 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) — —
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_11090 aspartate ammonia-lyase 0.53 AO356_08950 ADP-heptose--LPS heptosyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_5051 Aspartate ammonia-lyase 0.54 Psyr_0520 Glycosyl transferase, family 9 — —
Pseudomonas fluorescens SBW25 0.51 PFLU_RS29815 aspartate ammonia-lyase 0.53 PFLU_RS02285 lipopolysaccharide heptosyltransferase II — —
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS29815 aspartate ammonia-lyase 0.53 PFLU_RS02285 lipopolysaccharide heptosyltransferase II — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_5051 Aspartate ammonia-lyase 0.54 Psyr_0520 Glycosyl transferase, family 9 — —
Pseudomonas simiae WCS417 0.51 PS417_28130 aspartate ammonia-lyase 0.53 PS417_02230 ADP-heptose--LPS heptosyltransferase — —
Pseudomonas segetis P6 0.51 MPMX49_00161 Aspartate ammonia-lyase 0.53 MPMX49_04208 ADP-heptose--LPS heptosyltransferase 2 — —
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_742 Aspartate ammonia-lyase (EC 4.3.1.1) 0.53 PfGW456L13_212 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) — —
Pseudomonas orientalis W4I3 0.51 QF045_RS02490 aspartate ammonia-lyase 0.53 QF045_RS05290 lipopolysaccharide heptosyltransferase II — —
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_09950 aspartate ammonia-lyase 0.53 AO353_12875 ADP-heptose--LPS heptosyltransferase — —
Pseudomonas sp. DMC3 0.51 GFF488 Aspartate ammonia-lyase 0.53 GFF3156 ADP-heptose--LPS heptosyltransferase 2 — —
Pseudomonas stutzeri RCH2 0.50 Psest_4074 Aspartate ammonia-lyase 0.53 Psest_0451 lipopolysaccharide heptosyltransferase II — —
Bacteroides thetaiotaomicron VPI-5482 0.50 BT2755 aspartate ammonia-lyase (NCBI ptt file) 0.10 BT3362 heptosyltransferase (NCBI ptt file) — —
Desulfovibrio vulgaris Miyazaki F 0.49 DvMF_0565 aspA aspartate ammonia-lyase (RefSeq) 0.11 DvMF_3136 lipopolysaccharide heptosyltransferase II (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.49 DVU1871 aspA aspartate ammonia-lyase (TIGR) 0.11 DVU1055 heptosyltransferase family protein (TIGR) — —

Not shown: 12 genomes with orthologs for CSW01_13620 only; 19 genomes with orthologs for CSW01_01245 only