Conservation of cofitness between CSW01_01135 and CSW01_01015 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01135 nucleoid occlusion factor SlmA 1.0 CSW01_01015 DNA helicase II 0.45 8
Pantoea sp. MT58 0.69 IAI47_00605 nucleoid occlusion factor SlmA 0.69 IAI47_18390 DNA helicase II low > 76
Enterobacter sp. TBS_079 0.69 MPMX20_00094 Nucleoid occlusion factor SlmA 0.70 MPMX20_04463 DNA helicase II low > 85
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS18740 nucleoid occlusion factor SlmA 0.68 PagCFBP13505_RS15370 DNA helicase II low > 74
Erwinia amylovora T8 0.68 OLJFJH_05775 nucleoid occlusion factor SlmA 0.68 OLJFJH_06425 DNA helicase II low > 58
Serratia liquefaciens MT49 0.67 IAI46_24840 nucleoid occlusion factor SlmA 0.71 IAI46_00735 DNA helicase II low > 87
Pectobacterium carotovorum WPP14 0.66 HER17_RS20845 nucleoid occlusion factor SlmA 0.70 HER17_RS01360 DNA helicase II low > 75
Rahnella sp. WP5 0.66 EX31_RS14485 nucleoid occlusion factor SlmA 0.68 EX31_RS15175 DNA helicase II low > 89
Dickeya dianthicola 67-19 0.66 HGI48_RS00685 nucleoid occlusion factor SlmA 0.70 HGI48_RS20035 DNA helicase II low > 71
Dickeya dianthicola ME23 0.66 DZA65_RS00740 nucleoid occlusion factor SlmA 0.70 DZA65_RS21080 DNA helicase II low > 75
Shewanella oneidensis MR-1 0.66 SO4251 transcriptional regulator, TetR family (NCBI ptt file) 0.67 SO0467 uvrD DNA helicase II (NCBI ptt file) 0.46 22
Dickeya dadantii 3937 0.66 DDA3937_RS20530 nucleoid occlusion factor SlmA 0.70 DDA3937_RS19880 DNA helicase II low > 74
Klebsiella michiganensis M5al 0.65 BWI76_RS27380 nucleoid occlusion factor SlmA 0.71 BWI76_RS01220 DNA-dependent helicase II low > 92
Shewanella sp. ANA-3 0.65 Shewana3_3773 slmA nucleoid occlusion protein (RefSeq) 0.67 Shewana3_0469 uvrD DNA-dependent helicase II (RefSeq) low > 73
Enterobacter asburiae PDN3 0.65 EX28DRAFT_3891 transcriptional regulator, TetR family 0.70 EX28DRAFT_4482 ATP-dependent DNA helicase UvrD (EC 3.6.1.-) low > 76
Escherichia coli Nissle 1917 0.65 ECOLIN_RS20745 nucleoid occlusion factor SlmA 0.71 ECOLIN_RS21885 DNA helicase II low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF368 Transcriptional regulator SlmA, TetR family 0.71 GFF241 ATP-dependent DNA helicase UvrD/PcrA low > 78
Klebsiella pneumoniae MKP103 0.65 KDGMDA_08045 nucleoid occlusion factor SlmA 0.71 KDGMDA_09710 DNA helicase II low > 95
Escherichia coli ECRC102 0.64 NIAGMN_13365 slmA nucleoid occlusion factor SlmA 0.71 NIAGMN_12165 uvrD DNA helicase II low > 80
Escherichia coli BW25113 0.64 b3641 ttk putative transcriptional regulator (VIMSS) 0.71 b3813 uvrD DNA-dependent ATPase I and helicase II (NCBI) 0.16 34
Escherichia coli ECOR38 0.64 HEPCGN_14430 slmA nucleoid occlusion factor SlmA 0.71 HEPCGN_13115 uvrD DNA helicase II low > 88
Erwinia tracheiphila SCR3 0.64 LU632_RS22010 slmA nucleoid occlusion factor SlmA 0.68 LU632_RS24125 uvrD DNA helicase II
Escherichia coli BL21 0.64 ECD_03498 nucleoid occlusion factor, anti-FtsZ division inhibitor 0.71 ECD_03689 DNA-dependent ATPase I and helicase II
Escherichia coli ECRC100 0.64 OKFHMN_15605 slmA nucleoid occlusion factor SlmA 0.71 OKFHMN_14410 uvrD DNA helicase II low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00061 Nucleoid occlusion factor SlmA 0.71 OHPLBJKB_04237 DNA helicase II low > 74
Escherichia coli ECRC101 0.64 MCAODC_06115 slmA nucleoid occlusion factor SlmA 0.71 MCAODC_04915 uvrD DNA helicase II 0.42 55
Escherichia coli ECRC98 0.64 JDDGAC_19230 slmA nucleoid occlusion factor SlmA 0.71 JDDGAC_18035 uvrD DNA helicase II low > 87
Erwinia tracheiphila HP pepo 2.2 0.64 IJEDHG_07765 slmA nucleoid occlusion factor SlmA 0.68 IJEDHG_08770 uvrD DNA helicase II
Escherichia fergusonii Becca 0.64 EFB2_00172 Nucleoid occlusion factor SlmA 0.71 EFB2_04824 DNA helicase II low > 86
Escherichia coli ECRC99 0.64 KEDOAH_12545 slmA nucleoid occlusion factor SlmA 0.71 KEDOAH_13740 uvrD DNA helicase II
Escherichia coli ECRC62 0.64 BNILDI_04030 slmA nucleoid occlusion factor SlmA 0.71 BNILDI_04995 uvrD DNA helicase II low > 75
Escherichia coli ECOR27 0.64 NOLOHH_07485 slmA nucleoid occlusion factor SlmA 0.71 NOLOHH_06540 uvrD DNA helicase II low > 76
Alteromonas macleodii MIT1002 0.62 MIT1002_00047 Synthetically lethal with a defective Min system protein A 0.65 MIT1002_00153 DNA helicase II
Shewanella loihica PV-4 0.62 Shew_3484 slmA nucleoid occlusion protein (RefSeq) 0.66 Shew_3385 uvrD DNA-dependent helicase II (RefSeq)
Shewanella amazonensis SB2B 0.61 Sama_0324 slmA nucleoid occlusion protein (RefSeq) 0.66 Sama_0419 uvrD DNA-dependent helicase II (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_0784 transcriptional regulator, TetR family 0.58 B158DRAFT_0238 Superfamily I DNA and RNA helicases low > 40
Marinobacter adhaerens HP15 0.49 HP15_3273 nucleoid occlusion protein 0.56 HP15_3403 UvrD/REP helicase low > 73
Variovorax sp. SCN45 0.46 GFF4623 Transcriptional regulator, AcrR family 0.43 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) low > 127
Variovorax sp. OAS795 0.46 ABID97_RS05770 nucleoid occlusion factor SlmA 0.44 ABID97_RS09150 UvrD-helicase domain-containing protein low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF410 Transcriptional regulator SlmA, TetR family 0.42 GFF5598 ATP-dependent DNA helicase UvrD/PcrA
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS01135 dihydroorotate oxidase 0.44 RR42_RS15090 DNA helicase
Acidovorax sp. GW101-3H11 0.41 Ac3H11_1910 Transcriptional regulator SlmA, TetR family 0.44 Ac3H11_1660 ATP-dependent DNA helicase UvrD/PcrA
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_02213 transcriptional regulator, TetR family 0.44 H281DRAFT_04469 ATP-dependent DNA helicase UvrD
Methylophilus sp. DMC18 0.40 GFF2481 Nucleoid occlusion factor SlmA 0.48 GFF1664 DNA helicase II
Paraburkholderia graminis OAS925 0.40 ABIE53_000415 TetR/AcrR family transcriptional regulator 0.45 ABIE53_002936 DNA helicase-2/ATP-dependent DNA helicase PcrA
Dechlorosoma suillum PS 0.40 Dsui_1307 transcriptional regulator 0.45 Dsui_1227 DNA/RNA helicase, superfamily I low > 51
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS00295 nucleoid occlusion factor SlmA 0.44 QEN71_RS05110 3'-5' exonuclease
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS01600 dihydroorotate oxidase 0.45 BPHYT_RS13840 DNA-dependent helicase
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS05180 nucleoid occlusion factor SlmA 0.43 ABZR87_RS15705 UvrD-helicase domain-containing protein low > 80
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS09570 nucleoid occlusion factor SlmA 0.42 RALBFv3_RS03775 DNA-dependent helicase
Ralstonia solanacearum UW163 0.38 UW163_RS04010 nucleoid occlusion factor SlmA 0.42 UW163_RS09895 DNA-dependent helicase
Ralstonia solanacearum PSI07 0.37 RPSI07_RS23795 nucleoid occlusion factor SlmA 0.42 RPSI07_RS13455 DNA-dependent helicase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.13 Psyr_3154 transcriptional regulator, TetR family 0.58 Psyr_5065 ATP-dependent DNA helicase UvrD low > 86
Pseudomonas syringae pv. syringae B728a 0.13 Psyr_3154 transcriptional regulator, TetR family 0.58 Psyr_5065 ATP-dependent DNA helicase UvrD low > 86

Not shown: 0 genomes with orthologs for CSW01_01135 only; 59 genomes with orthologs for CSW01_01015 only