Conservation of cofitness between CSW01_08635 and CSW01_00690 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08635 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 1.0 CSW01_00690 homoserine/homoserine lactone efflux protein 0.48 4
Klebsiella michiganensis M5al 0.50 BWI76_RS09830 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.53 BWI76_RS01255 homoserine/homoserine lactone efflux protein low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_02746 tRNA 5-carboxymethoxyuridine methyltransferase 0.53 OHPLBJKB_04227 Homoserine/homoserine lactone efflux protein low > 74
Escherichia coli ECRC100 0.50 OKFHMN_05420 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.53 OKFHMN_14350 rhtB homoserine/homoserine lactone efflux protein low > 79
Escherichia coli ECRC102 0.50 NIAGMN_03140 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.53 NIAGMN_12105 rhtB homoserine/homoserine lactone efflux protein low > 80
Escherichia fergusonii Becca 0.50 EFB2_03143 tRNA 5-carboxymethoxyuridine methyltransferase 0.53 EFB2_04813 Homoserine/homoserine lactone efflux protein low > 86
Escherichia coli Nissle 1917 0.50 ECOLIN_RS04875 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.53 ECOLIN_RS21945 homoserine/homoserine lactone efflux protein — —
Escherichia coli BW25113 0.50 b0921 smtA predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) 0.53 b3824 rhtB neutral amino-acid efflux system (NCBI) low > 76
Escherichia coli ECRC98 0.50 JDDGAC_09030 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.53 JDDGAC_17975 rhtB homoserine/homoserine lactone efflux protein low > 87
Escherichia coli ECRC101 0.50 MCAODC_24810 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.53 MCAODC_04855 rhtB homoserine/homoserine lactone efflux protein low > 88
Klebsiella pneumoniae MKP103 0.50 KDGMDA_18030 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.53 KDGMDA_09750 homoserine/homoserine lactone efflux protein low > 95
Escherichia coli ECRC62 0.50 BNILDI_20235 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.53 BNILDI_05050 rhtB homoserine/homoserine lactone efflux protein low > 75
Escherichia coli ECOR38 0.50 HEPCGN_23105 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.52 HEPCGN_13050 rhtB homoserine/homoserine lactone efflux protein low > 88
Escherichia coli BL21 0.50 ECD_00925 putative S-adenosyl-L-methionine-dependent methyltransferase 0.53 ECD_03703 homoserine, homoserine lactone and S-methyl-methionine efflux pump low > 61
Escherichia coli ECOR27 0.50 NOLOHH_21980 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.53 NOLOHH_06480 rhtB homoserine/homoserine lactone efflux protein low > 76
Escherichia coli ECRC99 0.50 KEDOAH_22315 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.53 KEDOAH_13800 rhtB homoserine/homoserine lactone efflux protein — —
Dickeya dadantii 3937 0.50 DDA3937_RS09875 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.48 DDA3937_RS19835 homoserine/homoserine lactone efflux protein low > 74
Dickeya dianthicola 67-19 0.49 HGI48_RS09885 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.49 HGI48_RS19990 homoserine/homoserine lactone efflux protein low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF3678 S-adenosylmethionine-dependent methyltransferase Functionally Coupled to the MukBEF Chromosome Partitioning Mechanism 0.49 GFF250 Homoserine/homoserine lactone efflux protein low > 78
Dickeya dianthicola ME23 0.49 DZA65_RS10220 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.55 DZA65_RS21035 homoserine/homoserine lactone efflux protein low > 75
Rahnella sp. WP5 0.49 EX31_RS18180 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.47 EX31_RS15220 homoserine/homoserine lactone efflux protein low > 89
Pectobacterium carotovorum WPP14 0.49 HER17_RS12065 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.50 HER17_RS01405 homoserine/homoserine lactone efflux protein low > 75
Pantoea sp. MT58 0.48 IAI47_12800 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.46 IAI47_18345 homoserine/homoserine lactone efflux protein low > 76
Serratia liquefaciens MT49 0.48 IAI46_08715 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.45 IAI46_00780 homoserine/homoserine lactone efflux protein low > 86
Erwinia tracheiphila HP pepo 2.2 0.47 IJEDHG_20365 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.54 IJEDHG_08725 rhtB homoserine/homoserine lactone efflux protein low > 61
Erwinia tracheiphila SCR3 0.47 LU632_RS09865 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.54 LU632_RS24085 rhtB homoserine/homoserine lactone efflux protein low > 74
Enterobacter sp. TBS_079 0.47 MPMX20_01579 tRNA 5-carboxymethoxyuridine methyltransferase 0.52 MPMX20_04456 Homoserine/homoserine lactone efflux protein low > 85
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2015 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 0.52 EX28DRAFT_4489 The Resistance to Homoserine/Threonine (RhtB) Family protein low > 76
Pantoea agglomerans CFBP13505 P0401 0.45 PagCFBP13505_RS04530 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.46 PagCFBP13505_RS15325 homoserine/homoserine lactone efflux protein low > 74
Erwinia amylovora T8 0.43 OLJFJH_16080 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.49 OLJFJH_06450 homoserine/homoserine lactone efflux protein low > 58
Shewanella sp. ANA-3 0.40 Shewana3_0557 methyltransferase type 11 (RefSeq) 0.26 Shewana3_0118 lysine exporter protein LysE/YggA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.40 SO0558 smtA smtA protein (NCBI ptt file) 0.25 SO0122 transporter, LysE family (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.37 Sama_3149 smtA protein (RefSeq) 0.18 Sama_3631 amino acid transporter LysE (RefSeq) low > 62
Shewanella loihica PV-4 0.36 Shew_0440 methyltransferase type 12 (RefSeq) 0.24 Shew_3751 lysine exporter protein LysE/YggA (RefSeq) low > 60
Pseudomonas sp. S08-1 0.29 OH686_07475 tRNA uridine 5-oxyacetic acid(34) methyltransferase 0.42 OH686_13960 Homoserine/homoserine lactone efflux protein low > 80
Pseudomonas simiae WCS417 0.29 PS417_03035 SAM-dependent methyltransferase 0.39 PS417_27470 threonine transporter RhtB low > 88
Pseudomonas aeruginosa PA14 0.29 IKLFDK_29635 SAM-dependent methyltransferase 0.42 IKLFDK_27215 threonine transporter RhtB low > 100
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_08125 SAM-dependent methyltransferase 0.38 AO356_12840 threonine transporter RhtB low > 104
Pseudomonas lactucae CFBP13502 0.28 GEMAOFIL_00839 tRNA 5-carboxymethoxyuridine methyltransferase 0.40 GEMAOFIL_05633 Homoserine/homoserine lactone efflux protein low > 93
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3497 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) 0.37 Pf6N2E2_4441 Homoserine/homoserine lactone efflux protein low > 103
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS03115 methyltransferase domain-containing protein 0.40 PFLU_RS29150 threonine transporter RhtB low > 109
Pseudomonas fluorescens SBW25 0.28 PFLU_RS03115 methyltransferase domain-containing protein 0.40 PFLU_RS29150 threonine transporter RhtB low > 109
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_1289 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) 0.37 Pf1N1B4_2196 Homoserine/homoserine lactone efflux protein low > 87
Pseudomonas sp. DMC3 0.27 GFF3328 tRNA 5-carboxymethoxyuridine methyltransferase 0.41 GFF347 Homoserine/homoserine lactone efflux protein low > 89
Pseudomonas sp. RS175 0.27 PFR28_05234 tRNA 5-carboxymethoxyuridine methyltransferase 0.37 PFR28_04355 Homoserine/homoserine lactone efflux protein low > 88
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_37 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) 0.37 PfGW456L13_867 Homoserine/homoserine lactone efflux protein low > 87
Pseudomonas stutzeri RCH2 0.27 Psest_3358 Methyltransferase domain. 0.31 Psest_3737 Putative threonine efflux protein low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_0641 smtA protein 0.36 Psyr_0050 Lysine exporter protein (LYSE/YGGA) low > 86
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_0641 smtA protein 0.36 Psyr_0050 Lysine exporter protein (LYSE/YGGA) low > 86
Pseudomonas sp. SVBP6 0.26 COO64_RS26300 methyltransferase domain-containing protein 0.37 COO64_RS01135 LysE family transporter low > 93
Pseudomonas segetis P6 0.26 MPMX49_04011 tRNA 5-carboxymethoxyuridine methyltransferase 0.41 MPMX49_04512 Homoserine/homoserine lactone efflux protein low > 75
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_13750 SAM-dependent methyltransferase 0.41 AO353_08940 threonine transporter RhtB low > 101
Pseudomonas sp. BP01 0.26 JOY50_RS23225 methyltransferase domain-containing protein 0.39 JOY50_RS18695 LysE family transporter low > 84
Pseudomonas putida KT2440 0.25 PP_0578 putative Methyltransferase 0.35 PP_0198 putative transporter low > 96

Not shown: 1 genomes with orthologs for CSW01_08635 only; 29 genomes with orthologs for CSW01_00690 only