Conservation of cofitness between CSW01_07070 and CSW01_00450 in Vibrio cholerae E7946 ATCC 55056

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07070 HlyD family secretion protein 1.0 CSW01_00450 SCP2 domain-containing protein 0.43 20
Ralstonia solanacearum GMI1000 0.49 RS_RS09360 HlyD family secretion protein 0.12 RS_RS02280 SCP2 domain-containing protein — —
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2614 Multidrug resistance efflux pump 0.35 EX28DRAFT_4499 Uncharacterized protein conserved in bacteria low > 76
Castellaniella sp019104865 MT123 0.36 ABCV34_RS05945 HlyD family efflux transporter periplasmic adaptor subunit 0.14 ABCV34_RS14485 SCP2 sterol-binding domain-containing protein low > 48
Dickeya dadantii 3937 0.34 DDA3937_RS07310 efflux RND transporter periplasmic adaptor subunit 0.36 DDA3937_RS20325 SCP2 domain-containing protein — —
Dickeya dianthicola ME23 0.34 DZA65_RS08725 HlyD family efflux transporter periplasmic adaptor subunit 0.36 DZA65_RS00960 SCP2 domain-containing protein — —
Pseudomonas sp. BP01 0.34 JOY50_RS28125 HlyD family efflux transporter periplasmic adaptor subunit 0.12 JOY50_RS09630 SCP2 domain-containing protein low > 84
Pectobacterium carotovorum WPP14 0.33 HER17_RS04465 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 0.28 HER17_RS20605 SCP2 domain-containing protein — —
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_4001 Membrane fusion component of tripartite multidrug resistance system 0.12 Pf1N1B4_1563 Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes — —
Escherichia coli ECOR38 0.33 HEPCGN_21645 emrK multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.33 HEPCGN_12930 ubiJ ubiquinone biosynthesis protein UbiJ low > 88
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_148 Membrane fusion component of tripartite multidrug resistance system 0.12 Pf6N2E2_3780 Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes — —
Dickeya dianthicola 67-19 0.33 HGI48_RS08130 efflux RND transporter periplasmic adaptor subunit 0.36 HGI48_RS00900 SCP2 domain-containing protein — —
Escherichia fergusonii Becca 0.33 EFB2_01506 putative multidrug resistance protein EmrK 0.33 EFB2_04781 Ubiquinone biosynthesis accessory factor UbiJ low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_01353 putative multidrug resistance protein EmrK 0.34 OHPLBJKB_04217 hypothetical protein low > 74
Escherichia coli BW25113 0.33 b2368 emrK EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component (NCBI) 0.34 b3834 yigP hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.33 ECOLIN_RS13630 multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.33 ECOLIN_RS22120 ubiquinone biosynthesis protein UbiJ — —
Escherichia coli BL21 0.33 ECD_02278 multidrug resistance efflux pump membrane fusion protein 0.34 ECD_03727 aerobic ubiquinone synthesis protein, SCP2 family protein low > 61
Escherichia coli ECOR27 0.33 NOLOHH_14120 emrK multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.34 NOLOHH_06430 ubiJ ubiquinone biosynthesis protein UbiJ — —
Escherichia coli ECRC100 0.33 OKFHMN_22440 emrK multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.33 OKFHMN_14300 ubiJ ubiquinone biosynthesis protein UbiJ — —
Escherichia coli ECRC99 0.33 KEDOAH_05785 emrK multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.33 KEDOAH_13850 ubiJ ubiquinone biosynthesis protein UbiJ — —
Escherichia coli ECRC101 0.33 MCAODC_12970 emrK multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.33 MCAODC_04805 ubiJ ubiquinone biosynthesis protein UbiJ — —
Escherichia coli ECRC98 0.33 JDDGAC_26400 emrK multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.33 JDDGAC_17925 ubiJ ubiquinone biosynthesis protein UbiJ — —
Pseudomonas sp. RS175 0.33 PFR28_02748 Multidrug export protein EmrA 0.12 PFR28_04988 Ubiquinone biosynthesis accessory factor UbiJ — —
Escherichia coli ECRC102 0.33 NIAGMN_20215 emrK multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.33 NIAGMN_12055 ubiJ ubiquinone biosynthesis protein UbiJ — —
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_2605 Membrane fusion component of tripartite multidrug resistance system 0.12 PfGW456L13_300 Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes — —
Pseudomonas segetis P6 0.32 MPMX49_02242 Multidrug export protein EmrA 0.14 MPMX49_04259 Ubiquinone biosynthesis accessory factor UbiJ — —
Escherichia coli ECRC62 0.32 BNILDI_12975 emrK multidrug efflux MFS transporter periplasmic adaptor subunit EmrK 0.34 BNILDI_05100 ubiJ ubiquinone biosynthesis protein UbiJ — —
Pantoea agglomerans CFBP13505 P0401 0.32 PagCFBP13505_RS14495 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 0.35 PagCFBP13505_RS15260 SCP2 domain-containing protein — —
Pantoea sp. MT58 0.32 IAI47_04500 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 0.33 IAI47_18280 SCP2 domain-containing protein — —
Erwinia amylovora T8 0.32 OLJFJH_09805 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 0.35 OLJFJH_06505 Ubiquinone biosynthesis accessory factor UbiJ — —
Lysobacter sp. OAE881 0.32 ABIE51_RS07710 efflux RND transporter periplasmic adaptor subunit 0.15 ABIE51_RS00225 SCP2 sterol-binding domain-containing protein low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF1592 Multidrug resistance protein A 0.35 GFF261 Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes low > 78
Rahnella sp. WP5 0.31 EX31_RS13655 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 0.34 EX31_RS14620 SCP2 domain-containing protein low > 89
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS18900 HlyD family efflux transporter periplasmic adaptor subunit 0.12 PFLU_RS01910 sterol-binding protein low > 109
Pseudomonas fluorescens SBW25 0.31 PFLU_RS18900 HlyD family efflux transporter periplasmic adaptor subunit 0.12 PFLU_RS01910 sterol-binding protein low > 109
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.3525.1 Membrane fusion component of tripartite multidrug resistance system 0.14 Xcc-8004.294.1 Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes — —
Serratia liquefaciens MT49 0.31 IAI46_20000 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 0.34 IAI46_01070 SCP2 domain-containing protein low > 86
Enterobacter sp. TBS_079 0.31 MPMX20_03563 Multidrug export protein EmrA 0.35 MPMX20_04446 Ubiquinone biosynthesis accessory factor UbiJ — —
Pseudomonas simiae WCS417 0.31 PS417_16915 hemolysin D 0.13 PS417_01865 sterol-binding protein — —
Klebsiella michiganensis M5al 0.31 BWI76_RS22095 multidrug export protein EmrA 0.35 BWI76_RS01310 SCP2 domain-containing protein — —
Klebsiella pneumoniae MKP103 0.31 KDGMDA_02760 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 0.35 KDGMDA_09800 Ubiquinone biosynthesis accessory factor UbiJ — —
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS14770 HlyD family efflux transporter periplasmic adaptor subunit 0.17 ABZR86_RS13450 SCP2 sterol-binding domain-containing protein — —
Rhodanobacter sp000427505 FW510-R12 0.30 LRK53_RS00730 efflux RND transporter periplasmic adaptor subunit 0.19 LRK53_RS03410 SCP2 sterol-binding domain-containing protein low > 59
Shewanella amazonensis SB2B 0.23 Sama_0402 HlyD family secretion protein (RefSeq) 0.23 Sama_3203 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.23 Shewana3_0522 secretion protein HlyD family protein (RefSeq) 0.26 Shewana3_3726 hypothetical protein (RefSeq) — —
Shewanella loihica PV-4 0.20 Shew_1543 secretion protein HlyD family protein (RefSeq) 0.31 Shew_3374 hypothetical protein (RefSeq) low > 60
Erwinia tracheiphila HP pepo 2.2 0.20 IJEDHG_04310 efflux transporter periplasmic adaptor subunit 0.33 IJEDHG_08645 Ubiquinone biosynthesis accessory factor UbiJ — —
Erwinia tracheiphila SCR3 0.19 LU632_RS04700 HlyD family secretion protein 0.33 LU632_RS24000 SCP2 domain-containing protein — —
Pseudomonas stutzeri RCH2 0.10 Psest_2185 RND family efflux transporter, MFP subunit 0.15 Psest_3941 Uncharacterized protein conserved in bacteria — —

Not shown: 37 genomes with orthologs for CSW01_07070 only; 7 genomes with orthologs for CSW01_00450 only