Conservation of cofitness between CSW01_08810 and CSW01_00065 in Vibrio cholerae E7946 ATCC 55056

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08810 efflux RND transporter periplasmic adaptor subunit 1.0 CSW01_00065 DNA replication and repair protein RecF 0.49 18
Shewanella amazonensis SB2B 0.38 Sama_1715 acriflavin resistance periplasmic protein (RefSeq) 0.44 Sama_0015 recF recombination protein F (RefSeq) low > 62
Shewanella sp. ANA-3 0.22 Shewana3_3571 RND family efflux transporter MFP subunit (RefSeq) 0.45 Shewana3_0011 recF recombination protein F (RefSeq) low > 73
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS01915 efflux RND transporter periplasmic adaptor subunit 0.14 HMPREF1078_RS14620 DNA replication and repair protein RecF low > 61
Shewanella loihica PV-4 0.21 Shew_0467 RND family efflux transporter MFP subunit (RefSeq) 0.46 Shew_0003 DNA replication and repair protein RecF (RefSeq) low > 60
Bacteroides thetaiotaomicron VPI-5482 0.21 BT1693 periplasmic linker protein, putative multidrug resistance protein (NCBI ptt file) 0.16 BT4255 DNA replication and repair protein RecF, ABC family ATPase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.21 BACOVA_04447 efflux transporter, RND family, MFP subunit 0.16 BACOVA_05088 DNA replication and repair protein RecF low > 96
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS21015 efflux RND transporter periplasmic adaptor subunit 0.16 ABI39_RS13135 DNA replication and repair protein RecF low > 72
Pseudomonas sp. S08-1 0.19 OH686_06745 Multidrug efflux system, membrane fusion component 0.38 OH686_12620 DNA recombination and repair protein RecF low > 80
Phocaeicola vulgatus CL09T03C04 0.19 HMPREF1058_RS07125 efflux RND transporter periplasmic adaptor subunit 0.16 HMPREF1058_RS17135 DNA replication and repair protein RecF low > 67
Bacteroides stercoris CC31F 0.18 HMPREF1181_RS05550 efflux RND transporter periplasmic adaptor subunit 0.15 HMPREF1181_RS06185 DNA replication and repair protein RecF low > 56
Pseudomonas stutzeri RCH2 0.18 Psest_0734 RND family efflux transporter, MFP subunit 0.38 Psest_0004 recF protein low > 67
Pseudomonas sp. RS175 0.18 PFR28_00378 Multidrug resistance protein MdtA 0.38 PFR28_04593 DNA replication and repair protein RecF low > 88
Pseudomonas fluorescens FW300-N2C3 0.18 AO356_06135 RND transporter 0.37 AO356_11635 recombinase RecF low > 104
Pseudomonas simiae WCS417 0.18 PS417_06110 RND transporter 0.37 PS417_00015 recombinase RecF low > 88
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_3092 RND efflux membrane fusion protein 0.36 Pf6N2E2_4197 DNA recombination and repair protein RecF low > 103
Pseudomonas fluorescens FW300-N1B4 0.18 Pf1N1B4_3062 RND efflux membrane fusion protein 0.38 Pf1N1B4_1927 DNA recombination and repair protein RecF low > 87
Alteromonas macleodii MIT1002 0.18 MIT1002_01360 Toluene efflux pump periplasmic linker protein TtgG precursor 0.35 MIT1002_00003 DNA replication and repair protein RecF low > 70
Pseudomonas fluorescens SBW25-INTG 0.18 PFLU_RS06180 efflux RND transporter periplasmic adaptor subunit 0.37 PFLU_RS00015 DNA replication/repair protein RecF low > 109
Xanthobacter sp. DMC5 0.18 GFF4152 Multidrug resistance protein MdtE 0.11 GFF3876 DNA replication and repair protein RecF — —
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_4731 RND efflux membrane fusion protein 0.37 PfGW456L13_664 DNA recombination and repair protein RecF low > 87
Pseudomonas fluorescens SBW25 0.18 PFLU_RS06180 efflux RND transporter periplasmic adaptor subunit 0.37 PFLU_RS00015 DNA replication/repair protein RecF low > 109
Pseudomonas sp. SVBP6 0.17 COO64_RS19545 efflux RND transporter periplasmic adaptor subunit 0.37 COO64_RS02120 recF DNA replication/repair protein RecF low > 93
Pseudomonas fluorescens FW300-N2E3 0.17 AO353_16360 RND transporter 0.37 AO353_10480 recombinase RecF low > 101
Pseudomonas lactucae CFBP13502 0.17 GEMAOFIL_01392 Multidrug resistance protein MdtA 0.38 GEMAOFIL_00183 DNA replication and repair protein RecF low > 96
Pseudomonas orientalis W4I3 0.17 QF045_RS08960 efflux RND transporter periplasmic adaptor subunit 0.37 QF045_RS02960 DNA replication/repair protein RecF low > 93
Pseudomonas sp. DMC3 0.17 GFF2033 Multidrug resistance protein MdtA 0.38 GFF578 DNA replication and repair protein RecF low > 89
Pseudomonas segetis P6 0.17 MPMX49_01633 Multidrug resistance protein MdtA 0.38 MPMX49_00255 DNA replication and repair protein RecF low > 75
Pseudomonas sp. BP01 0.17 JOY50_RS26095 efflux RND transporter periplasmic adaptor subunit 0.38 JOY50_RS08340 recF DNA replication/repair protein RecF low > 84
Pseudomonas aeruginosa PA14 0.16 IKLFDK_18775 multidrug efflux RND transporter periplasmic adaptor subunit MexJ 0.38 IKLFDK_25545 DNA replication/repair protein RecF low > 98
Rhodopseudomonas palustris CGA009 0.16 TX73_010140 efflux RND transporter periplasmic adaptor subunit 0.12 TX73_000015 DNA replication/repair protein RecF low > 86
Pseudomonas putida KT2440 0.16 PP_1516 RND membrane fusion protein 0.37 PP_0012 DNA replication and repair protein low > 96
Acinetobacter baumannii LAC-4 0.16 RR41_RS00165 efflux RND transporter periplasmic adaptor subunit 0.29 RR41_RS00015 DNA replication/repair protein RecF low > 55
Phaeobacter inhibens DSM 17395 0.15 PGA1_c24620 putative secretion protein 0.12 PGA1_c00030 DNA replication and repair protein RecF low > 62
Acinetobacter radioresistens SK82 0.15 MPMX26_03011 Multidrug resistance protein MdtA 0.30 MPMX26_00003 DNA replication and repair protein RecF low > 36
Azospirillum sp. SherDot2 0.15 MPMX19_05261 Multidrug resistance protein MdtE 0.13 MPMX19_02716 DNA replication and repair protein RecF — —
Cellulophaga baltica 18 0.15 M666_RS14155 efflux RND transporter periplasmic adaptor subunit 0.15 M666_RS11055 DNA replication and repair protein RecF low > 67
Serratia liquefaciens MT49 0.15 IAI46_13380 efflux RND transporter periplasmic adaptor subunit 0.56 IAI46_00015 DNA replication/repair protein RecF low > 87
Xanthomonas campestris pv. campestris strain 8004 0.14 Xcc-8004.2439.1 Probable Co/Zn/Cd efflux system membrane fusion protein 0.25 Xcc-8004.4.1 DNA recombination and repair protein RecF low > 74
Lysobacter sp. OAE881 0.14 ABIE51_RS17600 efflux RND transporter periplasmic adaptor subunit 0.25 ABIE51_RS00765 DNA replication/repair protein RecF low > 62
Dickeya dianthicola ME23 0.13 DZA65_RS08245 efflux RND transporter periplasmic adaptor subunit 0.55 DZA65_RS00015 DNA replication/repair protein RecF low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.13 GFF4247 RND efflux system, membrane fusion protein CmeA 0.54 GFF1756 DNA recombination and repair protein RecF low > 78
Pantoea sp. MT58 0.12 IAI47_21720 efflux RND transporter periplasmic adaptor subunit 0.56 IAI47_00015 DNA replication/repair protein RecF low > 76

Not shown: 12 genomes with orthologs for CSW01_08810 only; 55 genomes with orthologs for CSW01_00065 only