| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Caulobacter crescentus NA1000 | 1.0 | CCNA_01324 | | LSU ribosomal protein L30P | 1.0 | CCNA_01379 | | type I secretion outer membrane protein rsaFb | 0.64 | 11 |
| Caulobacter crescentus NA1000 Δfur | 1.00 | CCNA_01324 | | LSU ribosomal protein L30P | 1.00 | CCNA_01379 | | type I secretion outer membrane protein rsaFb | low | > 67 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.79 | A4249_RS04000 | | 50S ribosomal protein L30 | 0.38 | A4249_RS08455 | | TolC family outer membrane protein | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.75 | Ga0059261_3747 | | ribosomal protein L30, bacterial/organelle | 0.25 | Ga0059261_0638 | | type I secretion outer membrane protein, TolC family | — | — |
| Phaeobacter inhibens DSM 17395 | 0.66 | PGA1_c01780 | | 50S ribosomal protein L30 | 0.21 | PGA1_c24020 | | putative outer membrane efflux protein | — | — |
| Sinorhizobium meliloti 1021 | 0.64 | SMc01291 | | 50S ribosomal protein L30 | 0.24 | SMc02082 | | outer membrane secretion protein | — | — |
| Rhizobium sp. OAE497 | 0.63 | ABIE40_RS07945 | | 50S ribosomal protein L30 | 0.09 | ABIE40_RS22040 | | TolC family outer membrane protein | — | — |
| Bosea sp. OAE506 | 0.63 | ABIE41_RS14640 | | 50S ribosomal protein L30 | 0.25 | ABIE41_RS15655 | | TolC family outer membrane protein | — | — |
| Rhodopseudomonas palustris CGA009 | 0.61 | TX73_016715 | | 50S ribosomal protein L30 | 0.28 | TX73_013360 | | TolC family outer membrane protein | — | — |
| Dinoroseobacter shibae DFL-12 | 0.60 | Dshi_0303 | | ribosomal protein L30 (RefSeq) | 0.21 | Dshi_2098 | | type I secretion outer membrane protein, TolC family (RefSeq) | — | — |
| Azospirillum sp. SherDot2 | 0.59 | MPMX19_00410 | | 50S ribosomal protein L30 | 0.27 | MPMX19_01309 | | Outer membrane efflux protein BepC | — | — |
| Rhodospirillum rubrum S1H | 0.58 | Rru_A2670 | | Ribosomal protein L30 (NCBI) | 0.24 | Rru_A1798 | | Type I secretion outer membrane protein, TolC (NCBI) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.51 | AMB_RS15680 | | 50S ribosomal protein L30 | 0.26 | AMB_RS11360 | | membrane protein | — | — |
| Shewanella sp. ANA-3 | 0.47 | Shewana3_0217 | rpmD | 50S ribosomal protein L30 (RefSeq) | 0.12 | Shewana3_0725 | tolC | outer membrane channel protein (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.46 | MIT1002_03593 | | 50S ribosomal protein L30 | 0.11 | MIT1002_00670 | | Outer membrane protein TolC precursor | — | — |
| Shewanella amazonensis SB2B | 0.46 | Sama_0231 | | 50S ribosomal protein L30 (RefSeq) | 0.12 | Sama_3261 | | type I secretion outer membrane protein, TolC (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.46 | SO0249 | rpmD | ribosomal protein L30 (NCBI ptt file) | 0.11 | SO4320 | aggA | agglutination protein (NCBI ptt file) | — | — |
| Variovorax sp. SCN45 | 0.44 | GFF5563 | | LSU ribosomal protein L30p (L7e) | 0.13 | GFF6530 | | Type I secretion outer membrane protein, TolC family | — | — |
| Ralstonia solanacearum PSI07 | 0.44 | RPSI07_RS10145 | | 50S ribosomal protein L30 | 0.12 | RPSI07_RS20545 | | channel protein TolC | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.44 | Echvi_0237 | | ribosomal protein L30, bacterial/organelle | 0.08 | Echvi_2834 | | Outer membrane protein | — | — |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS02750 | | 50S ribosomal protein L30 | 0.12 | ABZR87_RS08765 | | TolC family outer membrane protein | — | — |
| Ralstonia solanacearum UW163 | 0.44 | UW163_RS06520 | | 50S ribosomal protein L30 | 0.13 | UW163_RS00850 | | channel protein TolC | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.44 | RALBFv3_RS07100 | | 50S ribosomal protein L30 | 0.13 | RALBFv3_RS12715 | | channel protein TolC | — | — |
| Shewanella loihica PV-4 | 0.43 | Shew_0176 | | ribosomal protein L30 (RefSeq) | 0.11 | Shew_0310 | | TolC family type I secretion outer membrane protein (RefSeq) | — | — |
| Acinetobacter radioresistens SK82 | 0.43 | MPMX26_02703 | | 50S ribosomal protein L30 | 0.09 | MPMX26_00182 | | Outer membrane protein TolC | — | — |
| Pantoea sp. MT58 | 0.43 | IAI47_02210 | | 50S ribosomal protein L30 | 0.11 | IAI47_03135 | | outer membrane channel protein TolC | — | — |
| Ralstonia solanacearum GMI1000 | 0.42 | RS_RS15035 | | 50S ribosomal protein L30 | 0.13 | RS_RS03495 | | channel protein TolC | — | — |
| Variovorax sp. OAS795 | 0.42 | ABID97_RS01505 | | 50S ribosomal protein L30 | 0.13 | ABID97_RS21375 | | TolC family outer membrane protein | — | — |
| Rahnella sp. WP5 | 0.42 | EX31_RS16050 | | 50S ribosomal protein L30 | 0.11 | EX31_RS08100 | | outer membrane channel protein TolC | — | — |
| Dickeya dianthicola 67-19 | 0.42 | HGI48_RS19295 | | 50S ribosomal protein L30 | 0.12 | HGI48_RS01635 | | outer membrane channel protein TolC | — | — |
| Pectobacterium carotovorum WPP14 | 0.42 | HER17_RS02155 | | 50S ribosomal protein L30 | 0.14 | HER17_RS19825 | | outer membrane channel protein TolC | — | — |
| Dickeya dianthicola ME23 | 0.42 | DZA65_RS20415 | | 50S ribosomal protein L30 | 0.12 | DZA65_RS01710 | | outer membrane channel protein TolC | — | — |
| Dickeya dadantii 3937 | 0.42 | DDA3937_RS19195 | | 50S ribosomal protein L30 | 0.13 | DDA3937_RS01740 | | outer membrane channel protein TolC | — | — |
| Escherichia fergusonii Becca | 0.41 | EFB2_00521 | | 50S ribosomal protein L30 | 0.11 | EFB2_00773 | | Outer membrane protein TolC | — | — |
| Escherichia coli ECOR27 | 0.41 | NOLOHH_09250 | rpmD | 50S ribosomal protein L30 | 0.12 | NOLOHH_10610 | tolC | outer membrane channel protein TolC | — | — |
| Escherichia coli ECRC62 | 0.41 | BNILDI_02270 | rpmD | 50S ribosomal protein L30 | 0.12 | BNILDI_00905 | tolC | outer membrane channel protein TolC | — | — |
| Escherichia coli ECOR38 | 0.41 | HEPCGN_16280 | rpmD | 50S ribosomal protein L30 | 0.12 | HEPCGN_17680 | tolC | outer membrane channel protein TolC | — | — |
| Escherichia coli Nissle 1917 | 0.41 | ECOLIN_RS18945 | | 50S ribosomal protein L30 | 0.12 | ECOLIN_RS17515 | | outer membrane channel protein TolC | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.41 | OHPLBJKB_00401 | | 50S ribosomal protein L30 | 0.12 | OHPLBJKB_00668 | | Outer membrane protein TolC | — | — |
| Escherichia coli ECRC98 | 0.41 | JDDGAC_21080 | rpmD | 50S ribosomal protein L30 | 0.11 | JDDGAC_22440 | tolC | outer membrane channel protein TolC | — | — |
| Escherichia coli ECRC102 | 0.41 | NIAGMN_15220 | rpmD | 50S ribosomal protein L30 | 0.11 | NIAGMN_16570 | tolC | outer membrane channel protein TolC | — | — |
| Escherichia coli BW25113 | 0.41 | b3302 | rpmD | 50S ribosomal protein L30 (NCBI) | 0.12 | b3035 | tolC | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | — | — |
| Escherichia coli ECRC99 | 0.41 | KEDOAH_10690 | rpmD | 50S ribosomal protein L30 | 0.11 | KEDOAH_09340 | tolC | outer membrane channel protein TolC | — | — |
| Escherichia coli ECRC101 | 0.41 | MCAODC_07980 | rpmD | 50S ribosomal protein L30 | 0.11 | MCAODC_09320 | tolC | outer membrane channel protein TolC | — | — |
| Escherichia coli ECRC101 | 0.41 | OKFHMN_17450 | rpmD | 50S ribosomal protein L30 | 0.11 | OKFHMN_18805 | tolC | outer membrane channel protein TolC | — | — |
| Escherichia coli BL21 | 0.41 | ECD_03153 | | 50S ribosomal subunit protein L30 | 0.12 | ECD_02907 | | transport channel | — | — |
| Klebsiella michiganensis M5al | 0.41 | BWI76_RS25750 | | 50S ribosomal protein L30 | 0.11 | BWI76_RS24400 | | outer membrane channel protein TolC | — | — |
| Enterobacter sp. TBS_079 | 0.41 | MPMX20_04209 | | 50S ribosomal protein L30 | 0.12 | MPMX20_03882 | | Outer membrane protein TolC | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.41 | GFF2378 | | LSU ribosomal protein L30p (L7e) | 0.11 | GFF3149 | | Type I secretion outer membrane protein, TolC precursor | — | — |
| Enterobacter asburiae PDN3 | 0.41 | EX28DRAFT_0024 | | ribosomal protein L30, bacterial/organelle | 0.12 | EX28DRAFT_3073 | | type I secretion outer membrane protein, TolC family | — | — |
| Serratia liquefaciens MT49 | 0.40 | IAI46_23345 | | 50S ribosomal protein L30 | 0.11 | IAI46_08105 | | TolC family outer membrane protein | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.40 | CSW01_13050 | | 50S ribosomal protein L30 | 0.12 | CSW01_12335 | | outer membrane protein TolC | — | — |
| Erwinia tracheiphila SCR3 | 0.39 | LU632_RS22565 | rpmD | 50S ribosomal protein L30 | 0.11 | LU632_RS20635 | tolC | outer membrane channel protein TolC | — | — |
Not shown: 13 genomes with orthologs for CCNA_01324 only; 24 genomes with orthologs for CCNA_01379 only