Conservation of cofitness between CCNA_03517 and CCNA_00264 in Caulobacter crescentus NA1000 Δfur

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Caulobacter crescentus NA1000 Δfur 1.0 CCNA_03517 cytochrome c oxidase polypeptide I coxA 1.0 CCNA_00264 C4-dicarboxylate transport protein 0.60 18
Caulobacter crescentus NA1000 1.00 CCNA_03517 cytochrome c oxidase polypeptide I coxA 1.00 CCNA_00264 C4-dicarboxylate transport protein low > 66
Sphingomonas koreensis DSMZ 15582 0.68 Ga0059261_2008 cytochrome c oxidase, subunit I 0.54 Ga0059261_0201 Na+/H+-dicarboxylate symporters low > 68
Azospirillum sp. SherDot2 0.66 MPMX19_00885 Cytochrome c oxidase subunit 1 0.55 MPMX19_03595 C4-dicarboxylate transport protein 2 low > 112
Ralstonia solanacearum PSI07 0.53 RPSI07_RS22360 cytochrome c oxidase subunit I 0.50 RPSI07_RS14855 dicarboxylate/amino acid:cation symporter low > 81
Ralstonia solanacearum UW163 0.53 UW163_RS02630 cytochrome c oxidase subunit I 0.50 UW163_RS11255 dicarboxylate/amino acid:cation symporter — —
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS10950 cytochrome c oxidase subunit I 0.50 RALBFv3_RS02470 dicarboxylate/amino acid:cation symporter low > 76
Ralstonia solanacearum GMI1000 0.53 RS_RS01790 cytochrome c oxidase subunit I 0.50 RS_RS09840 dicarboxylate/amino acid:cation symporter low > 80
Variovorax sp. OAS795 0.53 ABID97_RS12000 cytochrome c oxidase subunit I 0.52 ABID97_RS23115 dicarboxylate/amino acid:cation symporter low > 91
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS07120 cytochrome c oxidase subunit I 0.17 LRK54_RS00700 dicarboxylate/amino acid:cation symporter low > 59
Rhodanobacter denitrificans MT42 0.53 LRK55_RS06860 cytochrome c oxidase subunit I 0.17 LRK55_RS00475 dicarboxylate/amino acid:cation symporter low > 63
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS06800 cytochrome c oxidase subunit I 0.47 ABZR87_RS14385 dicarboxylate/amino acid:cation symporter low > 80
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_16520 ctaD cytochrome c oxidase subunit I 0.16 OKGIIK_06560 gltP dicarboxylate/amino acid:cation symporter low > 52
Variovorax sp. SCN45 0.52 GFF2298 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) 0.55 GFF5354 C4-dicarboxylate transport protein low > 127
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS20785 cytochrome oxidase subunit I 0.54 HSERO_RS19090 C4-dicarboxylate ABC transporter low > 78
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS01880 cytochrome oxidase subunit I 0.56 RR42_RS26040 C4-dicarboxylate ABC transporter low > 128
Marinobacter adhaerens HP15 0.51 HP15_3772 cytochrome c oxidase, subunit I 0.22 HP15_2676 proton/sodium-glutamate symport protein low > 73
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS01500 cytochrome c oxidase subunit I 0.50 QEN71_RS11565 dicarboxylate/amino acid:cation symporter low > 153
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS02645 cytochrome oxidase subunit I 0.44 BPHYT_RS33330 C4-dicarboxylate ABC transporter — —
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_0136 cytochrome c oxidase, subunit I 0.23 B158DRAFT_2215 Na+/H+-dicarboxylate symporters low > 40
Shewanella oneidensis MR-1 0.50 SO4607 cytochrome c oxidase, subunit I (NCBI ptt file) 0.27 SO0922 proton/glutamate symporter (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.50 MIT1002_04034 Cytochrome c oxidase subunit 1 0.22 MIT1002_01702 Glutamate-aspartate carrier protein 0.87 40
Lysobacter sp. OAE881 0.50 ABIE51_RS19205 cytochrome c oxidase subunit I 0.22 ABIE51_RS17125 dicarboxylate/amino acid:cation symporter low > 62
Shewanella amazonensis SB2B 0.50 Sama_3484 cytochrome-c oxidase (RefSeq) 0.27 Sama_2768 proton/glutamate symporter (RefSeq) low > 62
Shewanella sp. ANA-3 0.50 Shewana3_3992 cytochrome c oxidase, subunit I (RefSeq) 0.26 Shewana3_1726 sodium:dicarboxylate symporter (RefSeq) low > 73
Pseudomonas simiae WCS417 0.50 PS417_00305 cytochrome oxidase subunit I 0.46 PS417_19045 amino acid:proton symporter low > 88
Shewanella loihica PV-4 0.49 Shew_0124 cytochrome-c oxidase (RefSeq) 0.26 Shew_0743 sodium:dicarboxylate symporter (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_4099 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) 0.48 Pf6N2E2_2249 Proton/glutamate symport protein @ Sodium/glutamate symport protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_11165 cytochrome oxidase subunit I 0.47 AO356_01905 L-aspartate transporter (from data) low > 104
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_1854 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) 0.53 Pf1N1B4_5607 C4-dicarboxylate transport protein low > 87
Pontibacter actiniarum KMM 6156, DSM 19842 0.38 CA264_13925 cytochrome c oxidase subunit I 0.32 CA264_01055 dicarboxylate/amino acid:cation symporter low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.37 Echvi_2103 Heme/copper-type cytochrome/quinol oxidases, subunit 1 0.21 Echvi_1519 Na+/H+-dicarboxylate symporters — —
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS17815 cytochrome c oxidase subunit I 0.51 CA265_RS10595 dicarboxylate/amino acid:cation symporter — —

Not shown: 29 genomes with orthologs for CCNA_03517 only; 14 genomes with orthologs for CCNA_00264 only