Conservation of cofitness between BPHYT_RS30235 and BPHYT_RS33635 in Burkholderia phytofirmans PsJN

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS30235 tartrate dehydrogenase 1.0 BPHYT_RS33635 AMP nucleosidase 0.22 19
Paraburkholderia graminis OAS925 0.98 ABIE53_005023 tartrate dehydrogenase/decarboxylase/D-malate dehydrogenase 0.98 ABIE53_004847 AMP nucleosidase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_06345 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase 0.98 H281DRAFT_06027 AMP nucleosidase low > 103
Paraburkholderia sabiae LMG 24235 0.88 QEN71_RS32005 tartrate dehydrogenase 0.94 QEN71_RS17860 AMP nucleosidase low > 153
Ralstonia solanacearum PSI07 0.80 RPSI07_RS07555 tartrate dehydrogenase 0.51 RPSI07_RS00695 AMP nucleosidase low > 81
Ralstonia solanacearum GMI1000 0.79 RS_RS24845 tartrate dehydrogenase 0.50 RS_RS18175 AMP nucleosidase low > 80
Ralstonia solanacearum IBSBF1503 0.78 RALBFv3_RS16145 tartrate dehydrogenase 0.50 RALBFv3_RS22470 AMP nucleosidase low > 76
Ralstonia solanacearum UW163 0.78 UW163_RS16880 tartrate dehydrogenase 0.50 UW163_RS23015 AMP nucleosidase — —
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS21505 tartrate dehydrogenase 0.50 ABZR87_RS17145 AMP nucleosidase low > 80
Serratia liquefaciens MT49 0.76 IAI46_21025 tartrate dehydrogenase 0.38 IAI46_16720 AMP nucleosidase low > 86
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_28225 tartrate dehydrogenase 0.40 AO353_06335 AMP nucleosidase low > 101
Acidovorax sp. GW101-3H11 0.75 Ac3H11_3259 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) 0.64 Ac3H11_4669 AMP nucleosidase (EC 3.2.2.4) low > 79
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_4932 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) 0.39 Pf1N1B4_2721 AMP nucleosidase (EC 3.2.2.4) low > 87
Herbaspirillum seropedicae SmR1 0.75 HSERO_RS07390 tartrate dehydrogenase 0.67 HSERO_RS19630 AMP nucleosidase low > 78
Variovorax sp. OAS795 0.75 ABID97_RS25885 tartrate dehydrogenase 0.63 ABID97_RS00880 AMP nucleosidase low > 91
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_26735 tartrate dehydrogenase 0.40 AO356_15450 AMP nucleosidase low > 104
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_369 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) 0.40 Pf6N2E2_5027 AMP nucleosidase (EC 3.2.2.4) low > 103
Klebsiella michiganensis M5al 0.74 BWI76_RS10680 tartrate dehydrogenase 0.38 BWI76_RS18545 AMP nucleosidase low > 92
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_2396 Tartrate dehydrogenase 0.40 Psyr_4337 AMP nucleosidase low > 86
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_2396 Tartrate dehydrogenase 0.40 Psyr_4337 AMP nucleosidase low > 86
Escherichia coli ECOR38 0.73 HEPCGN_05015 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.39 HEPCGN_03515 amn AMP nucleosidase low > 87
Escherichia coli ECOR27 0.73 NOLOHH_17145 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.39 NOLOHH_16125 amn AMP nucleosidase low > 75
Escherichia coli ECRC102 0.72 NIAGMN_01440 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.39 NIAGMN_22685 amn AMP nucleosidase — —
Escherichia coli ECRC62 0.72 BNILDI_15930 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.39 BNILDI_14920 amn AMP nucleosidase low > 75
Escherichia coli ECRC99 0.72 KEDOAH_01485 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.38 KEDOAH_02930 amn AMP nucleosidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_01933 D-malate dehydrogenase [decarboxylating] 0.38 OHPLBJKB_01726 AMP nucleosidase low > 73
Pseudomonas fluorescens SBW25 0.72 PFLU_RS19735 tartrate dehydrogenase 0.39 PFLU_RS26515 AMP nucleosidase low > 109
Escherichia coli ECRC101 0.72 MCAODC_18785 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.39 MCAODC_20210 amn AMP nucleosidase low > 87
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS19735 tartrate dehydrogenase 0.39 PFLU_RS26515 AMP nucleosidase low > 109
Escherichia coli ECRC98 0.72 JDDGAC_01200 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.39 JDDGAC_29310 amn AMP nucleosidase low > 86
Escherichia coli BW25113 0.72 b1800 yeaU predicted dehydrogenase (NCBI) 0.39 b1982 amn AMP nucleosidase (NCBI) low > 76
Escherichia coli ECRC100 0.72 OKFHMN_26625 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.39 OKFHMN_25180 amn AMP nucleosidase 0.58 39
Escherichia coli BL21 0.72 ECD_01770 D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase 0.39 ECD_01894 AMP nucleosidase low > 61
Castellaniella sp019104865 MT123 0.72 ABCV34_RS14695 tartrate dehydrogenase 0.59 ABCV34_RS12200 AMP nucleosidase low > 48
Variovorax sp. SCN45 0.66 GFF6198 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) 0.63 GFF3583 AMP nucleosidase (EC 3.2.2.4) 0.83 92
Bosea sp. OAE506 0.66 ABIE41_RS22540 tartrate dehydrogenase 0.39 ABIE41_RS04230 AMP nucleosidase low > 77
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS02600 tartrate dehydrogenase 0.51 RR42_RS21185 AMP nucleosidase low > 128
Dickeya dadantii 3937 0.66 DDA3937_RS04645 tartrate dehydrogenase 0.39 DDA3937_RS06940 AMP nucleosidase low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF3852 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) 0.62 GFF370 AMP nucleosidase (EC 3.2.2.4) low > 90
Dickeya dianthicola ME23 0.66 DZA65_RS04525 tartrate dehydrogenase 0.39 DZA65_RS07265 AMP nucleosidase low > 75
Pantoea sp. MT58 0.65 IAI47_17525 tartrate dehydrogenase 0.38 IAI47_07865 AMP nucleosidase low > 76
Dickeya dianthicola 67-19 0.65 HGI48_RS04605 tartrate dehydrogenase 0.39 HGI48_RS06920 AMP nucleosidase low > 71
Dinoroseobacter shibae DFL-12 0.64 Dshi_0775 tartrate dehydrogenase (RefSeq) 0.57 Dshi_3289 AMP nucleosidase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.52 PGA1_c17990 D-malate dehydrogenase 0.57 PGA1_c34250 AMP nucleosidase Amn low > 62

Not shown: 17 genomes with orthologs for BPHYT_RS30235 only; 23 genomes with orthologs for BPHYT_RS33635 only