Conservation of cofitness between BPHYT_RS24160 and BPHYT_RS17635 in Burkholderia phytofirmans PsJN

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS24160 D-galactarate dehydratase 1.0 BPHYT_RS17635 metal-binding protein 0.37 2
Paraburkholderia graminis OAS925 0.95 ABIE53_006505 galactarate dehydratase 0.90 ABIE53_003686 dinuclear metal center YbgI/SA1388 family protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.94 H281DRAFT_05320 galactarate dehydratase 0.91 H281DRAFT_05668 dinuclear metal center protein, YbgI/SA1388 family low > 103
Paraburkholderia sabiae LMG 24235 0.87 QEN71_RS33575 galactarate dehydratase 0.79 QEN71_RS27790 Nif3-like dinuclear metal center hexameric protein low > 153
Variovorax sp. SCN45 0.79 GFF2921 D-galactarate dehydratase (EC 4.2.1.42) 0.46 GFF5367 GTP cyclohydrolase 1 type 2 homolog YbgI low > 127
Cupriavidus basilensis FW507-4G11 0.78 RR42_RS29090 galactarate dehydrogenase 0.61 RR42_RS18835 Nif3-like dinuclear metal center hexameric protein low > 128
Variovorax sp. OAS795 0.77 ABID97_RS10325 galactarate dehydratase 0.43 ABID97_RS23060 Nif3-like dinuclear metal center hexameric protein low > 91
Herbaspirillum seropedicae SmR1 0.75 HSERO_RS15800 Galactarate dehydratase (EC 4.2.1.42) (from data) 0.59 HSERO_RS20255 metal-binding protein low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.74 GFF1502 D-galactarate dehydratase (EC 4.2.1.42) 0.50 GFF1298 FIG137478: Hypothetical protein YbgI low > 90
Acidovorax sp. GW101-3H11 0.71 Ac3H11_3953 D-galactarate dehydratase (EC 4.2.1.42) 0.44 Ac3H11_4745 FIG137478: Hypothetical protein YbgI low > 79
Ralstonia solanacearum GMI1000 0.68 RS_RS21090 galactarate dehydratase 0.63 RS_RS14685 Nif3-like dinuclear metal center hexameric protein low > 80
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS19730 galactarate dehydratase 0.64 RALBFv3_RS06740 Nif3-like dinuclear metal center hexameric protein low > 76
Ralstonia solanacearum UW163 0.68 UW163_RS19445 galactarate dehydratase 0.64 UW163_RS06875 Nif3-like dinuclear metal center hexameric protein — —
Ralstonia solanacearum PSI07 0.67 RPSI07_RS03485 galactarate dehydratase 0.64 RPSI07_RS10495 Nif3-like dinuclear metal center hexameric protein low > 81
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS20320 galactarate dehydratase 0.64 ABZR87_RS02395 Nif3-like dinuclear metal center hexameric protein low > 80
Dickeya dadantii 3937 0.66 DDA3937_RS17065 galactarate dehydratase 0.45 DDA3937_RS06410 type 2 GTP cyclohydrolase I low > 74
Escherichia coli ECRC98 0.65 JDDGAC_21985 garD galactarate dehydratase 0.47 JDDGAC_10665 ybgI radiation resistance protein YbgI low > 86
Escherichia coli ECRC99 0.65 KEDOAH_09795 garD galactarate dehydratase 0.47 KEDOAH_20955 ybgI radiation resistance protein YbgI — —
Escherichia coli ECRC101 0.65 MCAODC_08865 garD galactarate dehydratase 0.47 MCAODC_26230 ybgI radiation resistance protein YbgI low > 87
Escherichia coli ECRC102 0.65 NIAGMN_16115 garD galactarate dehydratase 0.47 NIAGMN_05065 ybgI radiation resistance protein YbgI — —
Escherichia coli Nissle 1917 0.65 ECOLIN_RS17975 galactarate dehydratase 0.47 ECOLIN_RS03800 radiation resistance protein YbgI — —
Escherichia coli BL21 0.65 ECD_02993 D-galactarate dehydrogenase 0.47 ECD_00670 NIF3 family metal-binding protein low > 61
Escherichia coli BW25113 0.65 b3128 garD (D)-galactarate dehydrogenase (NCBI) 0.47 b0710 ybgI conserved metal-binding protein (NCBI) low > 76
Escherichia coli ECRC100 0.65 OKFHMN_18355 garD galactarate dehydratase 0.47 OKFHMN_07010 ybgI radiation resistance protein YbgI low > 80
Escherichia coli ECRC62 0.65 BNILDI_01395 garD galactarate dehydratase 0.47 BNILDI_21390 ybgI radiation resistance protein YbgI low > 75
Escherichia coli ECOR38 0.65 HEPCGN_17190 garD galactarate dehydratase 0.47 HEPCGN_01200 ybgI radiation resistance protein YbgI low > 87
Escherichia coli ECOR27 0.65 NOLOHH_10135 garD galactarate dehydratase 0.47 NOLOHH_23395 ybgI radiation resistance protein YbgI low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_00575 Galactarate dehydratase (L-threo-forming) 0.47 OHPLBJKB_03007 GTP cyclohydrolase 1 type 2 low > 73
Escherichia fergusonii Becca 0.65 EFB2_00691 Galactarate dehydratase (L-threo-forming) 0.47 EFB2_03393 GTP cyclohydrolase 1 type 2 low > 86
Pectobacterium carotovorum WPP14 0.65 HER17_RS04070 galactarate dehydratase 0.47 HER17_RS14990 type 2 GTP cyclohydrolase I low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS17115 galactarate dehydratase 0.44 HGI48_RS06455 type 2 GTP cyclohydrolase I low > 71
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_3296 D-galactarate dehydratase (EC 4.2.1.42) 0.50 Pf6N2E2_5256 FIG137478: Hypothetical protein YbgI low > 103
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_07170 galactarate dehydratase 0.50 AO356_16660 metal-binding protein low > 104
Dickeya dianthicola ME23 0.65 DZA65_RS18190 galactarate dehydratase 0.44 DZA65_RS06800 type 2 GTP cyclohydrolase I low > 75
Pseudomonas sp. RS175 0.65 PFR28_00145 Galactarate dehydratase (L-threo-forming) 0.50 PFR28_00192 GTP cyclohydrolase 1 type 2 low > 88
Enterobacter sp. TBS_079 0.65 MPMX20_04037 Galactarate dehydratase (L-threo-forming) 0.48 MPMX20_01344 GTP cyclohydrolase 1 type 2 low > 85
Pantoea sp. MT58 0.65 IAI47_04075 galactarate dehydratase 0.45 IAI47_13810 type 2 GTP cyclohydrolase I low > 76
Rahnella sp. WP5 0.65 EX31_RS07995 galactarate dehydratase 0.45 EX31_RS23375 type 2 GTP cyclohydrolase I low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF1534 D-galactarate dehydratase (EC 4.2.1.42) 0.46 GFF4615 FIG137478: Hypothetical protein YbgI low > 78
Klebsiella michiganensis M5al 0.64 BWI76_RS24840 galactarate dehydratase 0.46 BWI76_RS08345 Nif3-like dinuclear metal center protein low > 92
Enterobacter asburiae PDN3 0.64 EX28DRAFT_3184 galactarate dehydratase 0.48 EX28DRAFT_2277 dinuclear metal center protein, YbgI/SA1388 family low > 76
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_5042 D-galactarate dehydratase (EC 4.2.1.42) 0.50 PfGW456L13_4997 FIG137478: Hypothetical protein YbgI low > 87
Erwinia tracheiphila SCR3 0.64 LU632_RS06305 garD galactarate dehydratase 0.47 LU632_RS16150 type 2 GTP cyclohydrolase I low > 74
Pseudomonas simiae WCS417 0.64 PS417_04210 Galactarate dehydratase (EC 4.2.1.42) (from data) 0.50 PS417_03710 metal-binding protein low > 88
Pseudomonas fluorescens SBW25 0.64 PFLU_RS04250 galactarate dehydratase 0.49 PFLU_RS03760 Nif3-like dinuclear metal center hexameric protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS04250 galactarate dehydratase 0.49 PFLU_RS03760 Nif3-like dinuclear metal center hexameric protein low > 109
Pseudomonas stutzeri RCH2 0.63 Psest_0377 galactarate dehydratase 0.49 Psest_3295 dinuclear metal center protein, YbgI/SA1388 family low > 67
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_05290 galactarate dehydratase 0.51 AO353_05085 metal-binding protein low > 101
Pseudomonas putida KT2440 0.62 PP_3601 galactarate dehydratase 0.51 PP_1302 putative metal-binding hydrolase-oxidase enzyme low > 96
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_4225 galactarate dehydratase 0.50 Psyr_4129 Protein of unknown function DUF34 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_4225 galactarate dehydratase 0.50 Psyr_4129 Protein of unknown function DUF34 low > 86

Not shown: 3 genomes with orthologs for BPHYT_RS24160 only; 12 genomes with orthologs for BPHYT_RS17635 only