Conservation of cofitness between BPHYT_RS16845 and BPHYT_RS16840 in Burkholderia phytofirmans PsJN

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16845 spermidine synthase 1.0 BPHYT_RS16840 transketolase 0.26 13
Paraburkholderia bryophila 376MFSha3.1 0.78 H281DRAFT_06313 spermidine synthase (EC 2.5.1.16) 0.95 H281DRAFT_06314 transketolase — —
Paraburkholderia graminis OAS925 0.76 ABIE53_003538 spermidine synthase 0.95 ABIE53_003537 transketolase — —
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS17580 spermidine synthase 0.69 RR42_RS17575 transketolase — —
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_02195 spermidine synthase 0.62 AO353_07955 transketolase — —
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_4155 Spermidine synthase (EC 2.5.1.16) 0.59 PfGW456L13_1064 Transketolase (EC 2.2.1.1) — —
Rahnella sp. WP5 0.27 EX31_RS03375 polyamine aminopropyltransferase 0.63 EX31_RS20285 transketolase low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_1864 spermidine synthase 0.63 Psyr_4792 transketolase — —
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_1864 spermidine synthase 0.63 Psyr_4792 transketolase — —
Dickeya dianthicola ME23 0.27 DZA65_RS17215 polyamine aminopropyltransferase 0.63 DZA65_RS19585 transketolase — —
Serratia liquefaciens MT49 0.26 IAI46_21290 polyamine aminopropyltransferase 0.63 IAI46_21045 transketolase — —
Dickeya dadantii 3937 0.26 DDA3937_RS16010 polyamine aminopropyltransferase 0.64 DDA3937_RS18525 transketolase — —
Dickeya dianthicola 67-19 0.26 HGI48_RS16130 polyamine aminopropyltransferase 0.63 HGI48_RS18450 transketolase — —
Rhodospirillum rubrum S1H 0.26 Rru_A1691 Spermine synthase (NCBI) 0.54 Rru_A2405 transketolase (NCBI) low > 58
Pseudomonas sp. S08-1 0.26 OH686_03215 spermidine synthase 0.63 OH686_10770 transketolase — —
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.4910.1 Spermidine synthase (EC 2.5.1.16) 0.59 Xcc-8004.1180.1 Transketolase (EC 2.2.1.1) — —
Pantoea sp. MT58 0.25 IAI47_15710 polyamine aminopropyltransferase 0.64 IAI47_03680 transketolase low > 76
Marinobacter adhaerens HP15 0.25 HP15_273 spermidine synthase 0.61 HP15_2913 bacterial transketolase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_03540 Polyamine aminopropyltransferase 0.65 OHPLBJKB_00781 Transketolase 1 — —
Escherichia coli BW25113 0.25 b0121 speE spermidine synthase (NCBI) 0.65 b2935 tktA transketolase 1, thiamin-binding (NCBI) low > 76
Escherichia coli ECRC62 0.25 BNILDI_08800 speE polyamine aminopropyltransferase 0.65 BNILDI_09775 tkt transketolase low > 75
Escherichia coli Nissle 1917 0.25 ECOLIN_RS00675 polyamine aminopropyltransferase 0.65 ECOLIN_RS16330 transketolase low > 55
Escherichia coli BL21 0.25 ECD_00120 spermidine synthase (putrescine aminopropyltransferase) 0.65 ECD_02765 transketolase 1, thiamine triphosphate-binding low > 61
Escherichia coli ECOR27 0.25 NOLOHH_02810 speE polyamine aminopropyltransferase 0.65 NOLOHH_11230 tkt transketolase low > 75
Escherichia coli ECRC101 0.25 MCAODC_00980 speE polyamine aminopropyltransferase 0.65 MCAODC_09845 tkt transketolase low > 87
Pseudomonas stutzeri RCH2 0.25 Psest_1911 spermidine synthase 0.65 Psest_0328 transketolase, bacterial and yeast — —
Escherichia coli ECRC98 0.25 JDDGAC_14060 speE polyamine aminopropyltransferase 0.65 JDDGAC_22955 tkt transketolase low > 86
Escherichia coli ECRC99 0.25 KEDOAH_17690 speE polyamine aminopropyltransferase 0.65 KEDOAH_08815 tkt transketolase — —
Escherichia coli ECRC100 0.25 OKFHMN_10465 speE polyamine aminopropyltransferase 0.65 OKFHMN_19325 tkt transketolase — —
Escherichia fergusonii Becca 0.25 EFB2_03924 Polyamine aminopropyltransferase 0.65 EFB2_00966 Transketolase 1 low > 86
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS15575 polyamine aminopropyltransferase 0.61 ABZR86_RS18655 transketolase — —
Escherichia coli ECRC102 0.25 NIAGMN_08315 speE polyamine aminopropyltransferase 0.65 NIAGMN_17090 tkt transketolase — —
Escherichia coli ECOR38 0.25 HEPCGN_08445 speE polyamine aminopropyltransferase 0.65 HEPCGN_18630 tkt transketolase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF107 Spermidine synthase (EC 2.5.1.16) 0.64 GFF3028 Transketolase (EC 2.2.1.1) low > 78
Klebsiella michiganensis M5al 0.25 BWI76_RS04925 spermidine synthase 0.64 BWI76_RS24015 transketolase — —
Enterobacter sp. TBS_079 0.25 MPMX20_00815 Polyamine aminopropyltransferase 0.64 MPMX20_03780 Transketolase 1 low > 85
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_15620 speE polyamine aminopropyltransferase 0.60 OKGIIK_01095 tkt transketolase — —
Pectobacterium carotovorum WPP14 0.25 HER17_RS05505 polyamine aminopropyltransferase 0.63 HER17_RS02680 transketolase low > 75
Enterobacter asburiae PDN3 0.25 EX28DRAFT_3718 spermidine synthase 0.63 EX28DRAFT_2974 transketolase, bacterial and yeast low > 76
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS09135 polyamine aminopropyltransferase 0.62 LRK54_RS05750 transketolase — —
Rhodanobacter denitrificans MT42 0.25 LRK55_RS08665 polyamine aminopropyltransferase 0.61 LRK55_RS05505 transketolase — —
Erwinia tracheiphila SCR3 0.24 LU632_RS20150 speE polyamine aminopropyltransferase 0.63 LU632_RS05520 tkt transketolase low > 74
Azospirillum brasilense Sp245 0.24 AZOBR_RS02020 spermidine synthase 0.47 AZOBR_RS09010 transketolase — —
Kangiella aquimarina DSM 16071 0.21 B158DRAFT_1810 spermidine synthase 0.62 B158DRAFT_0510 transketolase, bacterial and yeast — —
Shewanella amazonensis SB2B 0.21 Sama_1964 spermidine synthase (RefSeq) 0.63 Sama_2759 transketolase (RefSeq) — —

Not shown: 2 genomes with orthologs for BPHYT_RS16845 only; 42 genomes with orthologs for BPHYT_RS16840 only