Conservation of cofitness between BPHYT_RS02550 and BPHYT_RS12935 in Burkholderia phytofirmans PsJN

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS02550 ammonia channel protein 1.0 BPHYT_RS12935 chemotaxis protein CheY 0.36 2
Paraburkholderia graminis OAS925 0.80 ABIE53_000655 Amt family ammonium transporter 0.94 ABIE53_002804 two-component system nitrogen regulation response regulator GlnG low > 113
Paraburkholderia bryophila 376MFSha3.1 0.79 H281DRAFT_02012 ammonium transporter 0.93 H281DRAFT_00454 nitrogen metabolism transcriptional regulator, NtrC, Fis family low > 103
Paraburkholderia sabiae LMG 24235 0.75 QEN71_RS01405 ammonium transporter 0.88 QEN71_RS05675 nitrogen regulation protein NR(I) low > 153
Rhodospirillum rubrum S1H 0.55 Rru_A1129 Ammonium transporter (NCBI) 0.37 Rru_A1678 Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family (NCBI) 0.50 21
Azospirillum sp. SherDot2 0.54 MPMX19_02223 Ammonia channel 0.36 MPMX19_01112 DNA-binding transcriptional regulator NtrC — —
Magnetospirillum magneticum AMB-1 0.53 AMB_RS00080 ammonium transporter 0.38 AMB_RS11950 nitrogen regulation protein NR(I) — —
Azospirillum brasilense Sp245 0.53 AZOBR_RS00845 ammonia channel protein 0.36 AZOBR_RS14430 chemotaxis protein CheY low > 97
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_12705 ammonia channel protein 0.53 AO356_09730 nitrogen regulation protein NR(I) 0.54 7
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_4412 Ammonium transporter 0.53 Pf6N2E2_3826 Nitrogen regulation protein NR(I) 0.57 6
Pseudomonas sp. RS175 0.51 PFR28_04382 Ammonia channel 0.53 PFR28_04944 DNA-binding transcriptional regulator NtrC low > 88
Pseudomonas stutzeri RCH2 0.50 Psest_3772 ammonium transporter 0.52 Psest_3932 nitrogen regulation protein NR(I) 0.24 5
Pseudomonas sp. S08-1 0.49 OH686_13760 Ammonium transporter 0.52 OH686_10640 nitrogen regulation protein NR(I) low > 80
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS29300 ammonium transporter 0.53 PFLU_RS01685 nitrogen regulation protein NR(I) 0.65 3
Pseudomonas fluorescens SBW25 0.49 PFLU_RS29300 ammonium transporter 0.53 PFLU_RS01685 nitrogen regulation protein NR(I) low > 109
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_09070 ammonia channel protein 0.52 AO353_12145 nitrogen regulation protein NR(I) 0.62 4
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS09495 ammonium transporter 0.40 ABZR86_RS15515 nitrogen regulation protein NR(I) 0.54 5
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_838 Ammonium transporter 0.53 PfGW456L13_347 Nitrogen regulation protein NR(I) 0.75 3
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_2167 Ammonium transporter 0.53 Pf1N1B4_1611 Nitrogen regulation protein NR(I) 0.64 1
Acinetobacter radioresistens SK82 0.47 MPMX26_00150 Ammonia channel 0.50 MPMX26_01292 DNA-binding transcriptional regulator NtrC 0.60 6
Acidovorax sp. GW101-3H11 0.46 Ac3H11_3322 Ammonium transporter 0.65 Ac3H11_4432 Nitrogen regulation protein NR(I) low > 79
Dechlorosoma suillum PS 0.46 Dsui_0114 ammonium transporter 0.62 Dsui_1051 nitrogen regulation protein NR(I) low > 51
Pseudomonas simiae WCS417 0.46 PS417_27615 ammonia channel protein 0.53 PS417_01635 nitrogen regulation protein NR(I) 0.63 1
Pseudomonas putida KT2440 0.46 PP_5233 ammonium transporter AmtB 0.52 PP_5048 two-component system DNA-binding transcriptional dual regulator GlnL/GlnG 0.68 2
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_0189 ammonium transporter 0.53 Psyr_4822 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) — —
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_0189 ammonium transporter 0.53 Psyr_4822 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) low > 86
Bosea sp. OAE506 0.45 ABIE41_RS04755 ammonium transporter 0.36 ABIE41_RS16785 nitrogen regulation protein NR(I) low > 77
Rhodopseudomonas palustris CGA009 0.44 TX73_001425 ammonium transporter 0.36 TX73_013420 nitrogen regulation protein NR(I) low > 86
Variovorax sp. SCN45 0.43 GFF5023 Ammonium transporter 0.69 GFF3066 Nitrogen regulation protein NR(I), GlnG (=NtrC) — —
Shewanella sp. ANA-3 0.42 Shewana3_0778 ammonium transporter (RefSeq) 0.52 Shewana3_0258 nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) low > 73
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF1922 Ammonium transporter 0.68 GFF5269 Nitrogen regulation protein NR(I) low > 90
Pectobacterium carotovorum WPP14 0.41 HER17_RS15785 ammonium transporter AmtB 0.52 HER17_RS21440 nitrogen regulation protein NR(I) low > 75
Variovorax sp. OAS795 0.40 ABID97_RS03635 ammonium transporter 0.67 ABID97_RS09945 nitrogen regulation protein NR(I) low > 91
Erwinia tracheiphila SCR3 0.40 LU632_RS18270 amtB ammonium transporter AmtB 0.50 LU632_RS22135 glnG nitrogen regulation protein NR(I) 0.68 2
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2518 ammonium transporter 0.51 EX28DRAFT_4350 nitrogen regulation protein NR(I) low > 76
Dickeya dianthicola 67-19 0.37 HGI48_RS05745 ammonium transporter AmtB 0.52 HGI48_RS21235 nitrogen regulation protein NR(I) low > 71
Dickeya dianthicola ME23 0.37 DZA65_RS06070 ammonium transporter AmtB 0.52 DZA65_RS22210 nitrogen regulation protein NR(I) low > 75
Caulobacter crescentus NA1000 Δfur 0.36 CCNA_01399 ammonium transporter/methylammonium transporter 0.30 CCNA_01815 nitrogen assimilation regulatory protein NtrC — —
Caulobacter crescentus NA1000 0.36 CCNA_01399 ammonium transporter/methylammonium transporter 0.30 CCNA_01815 nitrogen assimilation regulatory protein NtrC low > 66
Dickeya dadantii 3937 0.36 DDA3937_RS05700 ammonium transporter AmtB 0.52 DDA3937_RS00125 nitrogen regulation protein NR(I) low > 74
Rhodanobacter denitrificans MT42 0.36 LRK55_RS07860 ammonium transporter 0.40 LRK55_RS07730 nitrogen regulation protein NR(I) low > 63
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS08110 ammonium transporter 0.40 LRK54_RS07980 nitrogen regulation protein NR(I) low > 59

Not shown: 11 genomes with orthologs for BPHYT_RS02550 only; 41 genomes with orthologs for BPHYT_RS12935 only