Conservation of cofitness between BPHYT_RS31690 and BPHYT_RS02940 in Burkholderia phytofirmans PsJN

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS31690 hypothetical protein 1.0 BPHYT_RS02940 adenine phosphoribosyltransferase 0.29 10
Paraburkholderia graminis OAS925 0.36 ABIE53_005847 L-lactate dehydrogenase (cytochrome) 0.93 ABIE53_000725 adenine phosphoribosyltransferase low > 113
Magnetospirillum magneticum AMB-1 0.35 AMB_RS22540 alpha-hydroxy-acid oxidizing protein 0.39 AMB_RS14345 adenine phosphoribosyltransferase low > 64
Bosea sp. OAE506 0.34 ABIE41_RS11285 alpha-hydroxy acid oxidase 0.47 ABIE41_RS11210 adenine phosphoribosyltransferase low > 77
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF1521 L-lactate dehydrogenase (EC 1.1.2.3) 0.70 GFF2440 Adenine phosphoribosyltransferase (EC 2.4.2.7) low > 90
Phaeobacter inhibens DSM 17395 0.31 PGA1_c09430 l-lactate dehydrogenase IldD 0.48 PGA1_c06370 adenine phosphoribosyltransferase Apt low > 62
Azospirillum sp. SherDot2 0.31 MPMX19_04146 L-lactate dehydrogenase 0.38 MPMX19_06118 Adenine phosphoribosyltransferase low > 112
Dinoroseobacter shibae DFL-12 0.30 Dshi_2484 FMN-dependent alpha-hydroxy acid dehydrogenase (RefSeq) 0.53 Dshi_2074 adenine phosphoribosyltransferase (RefSeq) low > 64
Acidovorax sp. GW101-3H11 0.29 Ac3H11_1767 L-lactate dehydrogenase (EC 1.1.2.3) 0.70 Ac3H11_4267 Adenine phosphoribosyltransferase (EC 2.4.2.7) low > 79
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS01315 alpha-hydroxy acid oxidase 0.37 ABZR86_RS19335 adenine phosphoribosyltransferase low > 74
Rhodopseudomonas palustris CGA009 0.29 TX73_022385 alpha-hydroxy acid oxidase 0.50 TX73_023325 adenine phosphoribosyltransferase low > 86
Agrobacterium fabrum C58 0.29 Atu2318 L-lactate dehydrogenase 0.48 Atu2236 adenine phosphoribosyltransferase low > 89
Sinorhizobium meliloti 1021 0.28 SM_b20850 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) (from data) 0.48 SMc02698 adenine phosphoribosyltransferase low > 103
Castellaniella sp019104865 MT123 0.28 ABCV34_RS00430 alpha-hydroxy acid oxidase 0.67 ABCV34_RS14375 adenine phosphoribosyltransferase low > 48
Pseudomonas fluorescens SBW25 0.28 PFLU_RS17610 alpha-hydroxy-acid oxidizing protein 0.50 PFLU_RS22400 adenine phosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS17610 alpha-hydroxy-acid oxidizing protein 0.50 PFLU_RS22400 adenine phosphoribosyltransferase low > 109
Alteromonas macleodii MIT1002 0.27 MIT1002_03330 L-lactate dehydrogenase [cytochrome] 0.47 MIT1002_02655 Adenine phosphoribosyltransferase low > 70
Pseudomonas simiae WCS417 0.27 PS417_15625 lactate dehydrogenase 0.50 PS417_20790 adenine phosphoribosyltransferase low > 88
Ralstonia solanacearum PSI07 0.27 RPSI07_RS14000 alpha-hydroxy-acid oxidizing protein 0.75 RPSI07_RS22085 adenine phosphoribosyltransferase low > 81
Rahnella sp. WP5 0.27 EX31_RS06770 alpha-hydroxy-acid oxidizing protein 0.49 EX31_RS22505 adenine phosphoribosyltransferase low > 89
Pectobacterium carotovorum WPP14 0.27 HER17_RS20970 FMN-dependent L-lactate dehydrogenase LldD 0.46 HER17_RS15710 adenine phosphoribosyltransferase low > 75
Rhizobium sp. OAE497 0.27 ABIE40_RS13790 alpha-hydroxy acid oxidase 0.48 ABIE40_RS13115 adenine phosphoribosyltransferase low > 107
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_0908 FMN-dependent alpha-hydroxy acid dehydrogenase 0.50 Psyr_3426 adenine phosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_0908 FMN-dependent alpha-hydroxy acid dehydrogenase 0.50 Psyr_3426 adenine phosphoribosyltransferase low > 86
Pantoea sp. MT58 0.26 IAI47_15020 FMN-dependent L-lactate dehydrogenase LldD 0.39 IAI47_14480 adenine phosphoribosyltransferase low > 76
Escherichia coli ECRC101 0.25 MCAODC_06280 lldD quinone-dependent L-lactate dehydrogenase 0.47 MCAODC_27395 apt adenine phosphoribosyltransferase low > 87
Escherichia fergusonii Becca 0.25 EFB2_00205 L-lactate dehydrogenase 0.47 EFB2_03589 Adenine phosphoribosyltransferase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_00094 L-lactate dehydrogenase 0.47 OHPLBJKB_03205 Adenine phosphoribosyltransferase low > 73
Escherichia coli BL21 0.25 ECD_03463 L-lactate dehydrogenase, FMN-linked 0.47 ECD_00420 adenine phosphoribosyltransferase low > 61
Escherichia coli ECOR27 0.25 NOLOHH_07650 lldD quinone-dependent L-lactate dehydrogenase 0.47 NOLOHH_01100 apt adenine phosphoribosyltransferase low > 75
Escherichia coli ECRC100 0.25 OKFHMN_15770 lldD quinone-dependent L-lactate dehydrogenase 0.47 OKFHMN_08170 apt adenine phosphoribosyltransferase low > 80
Escherichia coli ECRC62 0.25 BNILDI_03865 lldD quinone-dependent L-lactate dehydrogenase 0.47 BNILDI_22520 apt adenine phosphoribosyltransferase low > 75
Escherichia coli BW25113 0.25 b3605 lldD L-lactate dehydrogenase, FMN-linked (NCBI) 0.47 b0469 apt adenine phosphoribosyltransferase (NCBI) low > 76
Escherichia coli ECRC99 0.25 KEDOAH_12380 lldD quinone-dependent L-lactate dehydrogenase 0.47 KEDOAH_19795 apt adenine phosphoribosyltransferase — —
Escherichia coli ECRC102 0.25 NIAGMN_13530 lldD quinone-dependent L-lactate dehydrogenase 0.47 NIAGMN_06225 apt adenine phosphoribosyltransferase — —
Escherichia coli ECRC98 0.25 JDDGAC_19395 lldD quinone-dependent L-lactate dehydrogenase 0.47 JDDGAC_11820 apt adenine phosphoribosyltransferase low > 86
Escherichia coli ECOR38 0.25 HEPCGN_14610 lldD quinone-dependent L-lactate dehydrogenase 0.47 HEPCGN_06785 apt adenine phosphoribosyltransferase low > 87
Escherichia coli Nissle 1917 0.25 ECOLIN_RS20580 quinone-dependent L-lactate dehydrogenase 0.47 ECOLIN_RS02790 adenine phosphoribosyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.142.1 L-lactate dehydrogenase (EC 1.1.2.3) 0.35 Xcc-8004.2273.1 Adenine phosphoribosyltransferase (EC 2.4.2.7) low > 74
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_19035 alpha-hydroxy-acid oxidizing enzyme 0.50 CSW01_05360 adenine phosphoribosyltransferase low > 62
Pseudomonas putida KT2440 0.25 PP_4736 L-lactate dehydrogenase 0.48 PP_4266 Adenine phosphoribosyltransferase low > 96
Serratia liquefaciens MT49 0.24 IAI46_20620 FMN-dependent L-lactate dehydrogenase LldD 0.46 IAI46_05225 adenine phosphoribosyltransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF409 L-lactate dehydrogenase (EC 1.1.2.3) 0.46 GFF4387 Adenine phosphoribosyltransferase (EC 2.4.2.7) low > 78
Enterobacter asburiae PDN3 0.24 EX28DRAFT_3855 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 0.46 EX28DRAFT_2489 adenine phosphoribosyltransferase (EC 2.4.2.7) low > 76
Enterobacter sp. TBS_079 0.24 MPMX20_00129 L-lactate dehydrogenase 0.47 MPMX20_01071 Adenine phosphoribosyltransferase low > 85
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_2629 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 0.43 Ga0059261_3222 adenine phosphoribosyltransferase (EC 2.4.2.7) low > 68
Pseudomonas sp. S08-1 0.23 OH686_17010 L-lactate dehydrogenase 0.55 OH686_02250 adenine phosphoribosyltransferase low > 80
Azospirillum brasilense Sp245 0.22 AZOBR_RS27055 L-lactate dehydrogenase 0.36 AZOBR_RS21480 adenine phosphoribosyltransferase low > 97
Dechlorosoma suillum PS 0.22 Dsui_1668 alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase 0.58 Dsui_2706 adenine phosphoribosyltransferase 0.71 12

Not shown: 9 genomes with orthologs for BPHYT_RS31690 only; 38 genomes with orthologs for BPHYT_RS02940 only