Conservation of cofitness between BPHYT_RS01650 and BPHYT_RS00185 in Burkholderia phytofirmans PsJN

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS01650 23S rRNA methyltransferase 1.0 BPHYT_RS00185 putative transcriptional regulator 0.33 11
Paraburkholderia graminis OAS925 0.94 ABIE53_000425 23S rRNA (cytosine1962-C5)-methyltransferase 0.57 ABIE53_005636 putative MFS family arabinose efflux permease low > 113
Ralstonia sp. UNC404CL21Col 0.76 ABZR87_RS05070 class I SAM-dependent rRNA methyltransferase 0.36 ABZR87_RS12380 MFS transporter low > 80
Ralstonia solanacearum PSI07 0.76 RPSI07_RS23695 class I SAM-dependent rRNA methyltransferase 0.62 RPSI07_RS04185 MFS transporter low > 81
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS09670 class I SAM-dependent rRNA methyltransferase 0.73 RALBFv3_RS20735 MFS transporter low > 76
Ralstonia solanacearum GMI1000 0.75 RS_RS00255 class I SAM-dependent rRNA methyltransferase 0.62 RS_RS01025 MFS transporter low > 80
Cupriavidus basilensis FW507-4G11 0.71 RR42_RS01670 23S rRNA methyltransferase 0.67 RR42_RS30495 transcriptional regulator low > 128
Klebsiella michiganensis M5al 0.47 BWI76_RS10045 23S rRNA (cytosine(1962)-C(5))-methyltransferase 0.64 BWI76_RS12600 MFS transporter low > 92
Escherichia coli ECRC102 0.46 NIAGMN_02905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.63 NIAGMN_07320 araJ putative arabinose efflux permease AraJ, MFS family — —
Escherichia coli ECRC99 0.46 KEDOAH_22550 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.64 KEDOAH_18685 araJ putative arabinose efflux permease AraJ, MFS family — —
Escherichia coli ECRC101 0.46 MCAODC_24575 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.64 MCAODC_28480 araJ putative arabinose efflux permease AraJ, MFS family low > 87
Escherichia coli ECRC98 0.46 JDDGAC_08795 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.64 JDDGAC_12905 araJ putative arabinose efflux permease AraJ, MFS family low > 86
Escherichia coli ECRC62 0.46 BNILDI_19905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.33 BNILDI_04155 nepI purine ribonucleoside efflux pump NepI low > 75
Escherichia coli ECRC100 0.46 OKFHMN_05185 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.64 OKFHMN_09265 araJ putative arabinose efflux permease AraJ, MFS family low > 80
Enterobacter sp. TBS_079 0.46 MPMX20_01617 Ribosomal RNA large subunit methyltransferase I 0.68 MPMX20_00065 Purine ribonucleoside efflux pump NepI low > 85
Enterobacter asburiae PDN3 0.46 EX28DRAFT_1976 Predicted SAM-dependent methyltransferases 0.67 EX28DRAFT_1484 Arabinose efflux permease low > 76
Escherichia coli BL21 0.46 ECD_00971 23S rRNA m(5)C1962 methyltransferase, SAM-dependent 0.34 ECD_03546 putative transporter low > 61
Escherichia coli BW25113 0.46 b0967 yccW predicted methyltransferase (RefSeq) 0.34 b3662 nepI predicted transporter (RefSeq) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_02699 Ribosomal RNA large subunit methyltransferase I 0.33 OHPLBJKB_00038 Purine ribonucleoside efflux pump NepI low > 73
Escherichia coli ECOR27 0.46 NOLOHH_21740 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.33 NOLOHH_07370 nepI purine ribonucleoside efflux pump NepI low > 75
Escherichia coli Nissle 1917 0.46 ECOLIN_RS05085 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.33 ECOLIN_RS21125 purine ribonucleoside efflux pump NepI — —
Escherichia fergusonii Becca 0.46 EFB2_03104 Ribosomal RNA large subunit methyltransferase I 0.66 EFB2_00881 Purine ribonucleoside efflux pump NepI low > 86
Escherichia coli ECOR38 0.46 HEPCGN_23335 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.34 HEPCGN_13950 nepI purine ribonucleoside efflux pump NepI low > 87
Pantoea sp. MT58 0.46 IAI47_12595 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.60 IAI47_21440 MFS transporter low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF3258 LSU m5C1962 methyltransferase RlmI 0.32 GFF318 Putative transport protein low > 78
Rahnella sp. WP5 0.44 EX31_RS17990 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.68 EX31_RS17665 MFS transporter low > 89
Azospirillum brasilense Sp245 0.28 AZOBR_RS01190 SAM-dependent methyltransferase 0.15 AZOBR_RS21030 MFS transporter low > 97
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.5393.1 LSU m5C1962 methyltransferase RlmI 0.37 Xcc-8004.371.1 transcriptional regulator low > 74
Azospirillum sp. SherDot2 0.26 MPMX19_00203 Ribosomal RNA large subunit methyltransferase I 0.63 MPMX19_04673 Purine ribonucleoside efflux pump NepI low > 112
Pseudomonas sp. RS175 0.26 PFR28_04274 Ribosomal RNA large subunit methyltransferase I 0.62 PFR28_01200 Purine ribonucleoside efflux pump NepI low > 88
Dyella japonica UNC79MFTsu3.2 0.26 ABZR86_RS16890 class I SAM-dependent rRNA methyltransferase 0.63 ABZR86_RS17780 MFS transporter low > 74
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_4566 LSU m5C1962 methyltransferase RlmI 0.62 Pf6N2E2_2246 Arabinose efflux permease low > 103
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_13260 SAM-dependent methyltransferase 0.61 AO356_01890 transcriptional regulator low > 104
Pseudomonas simiae WCS417 0.26 PS417_26880 SAM-dependent methyltransferase 0.33 PS417_11060 transporter low > 88
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_2307 LSU m5C1962 methyltransferase RlmI 0.58 Pf1N1B4_4993 Arabinose efflux permease low > 87
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_4764 SAM-dependent methyltransferase 0.50 Psyr_3800 Major facilitator superfamily low > 86
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS28525 class I SAM-dependent rRNA methyltransferase 0.53 PFLU_RS16800 MFS transporter low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_4764 SAM-dependent methyltransferase 0.50 Psyr_3800 Major facilitator superfamily low > 86
Pseudomonas fluorescens SBW25 0.25 PFLU_RS28525 class I SAM-dependent rRNA methyltransferase 0.53 PFLU_RS16800 MFS transporter low > 109
Methanococcus maripaludis S2 0.21 MMP_RS06735 class I SAM-dependent rRNA methyltransferase 0.54 MMP_RS04150 MFS transporter low > 25

Not shown: 42 genomes with orthologs for BPHYT_RS01650 only; 3 genomes with orthologs for BPHYT_RS00185 only