Conservation of cofitness between BNILDI_16225 and BNILDI_09730 in Escherichia coli ECRC62

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_16225 astE succinylglutamate desuccinylase 1.0 BNILDI_09730 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.75 6
Escherichia coli BW25113 1.00 b1744 astE succinylglutamate desuccinylase (NCBI) 1.00 b2946 yggJ orf, hypothetical protein (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01988 Succinylglutamate desuccinylase 1.00 OHPLBJKB_00772 Ribosomal RNA small subunit methyltransferase E low > 73
Escherichia coli ECOR27 1.00 NOLOHH_17440 astE succinylglutamate desuccinylase 1.00 NOLOHH_11150 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 75
Escherichia coli BL21 1.00 ECD_01713 succinylglutamate desuccinylase 1.00 ECD_02776 16S rRNA m(3)U1498 methyltransferase, SAM-dependent low > 61
Escherichia fergusonii Becca 0.99 EFB2_02249 Succinylglutamate desuccinylase 1.00 EFB2_00956 Ribosomal RNA small subunit methyltransferase E low > 86
Escherichia coli ECRC100 0.99 OKFHMN_26925 astE succinylglutamate desuccinylase 1.00 OKFHMN_19280 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 80
Escherichia coli ECRC99 0.99 KEDOAH_01185 astE succinylglutamate desuccinylase 1.00 KEDOAH_08860 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli ECRC101 0.99 MCAODC_18485 astE succinylglutamate desuccinylase 1.00 MCAODC_09800 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 87
Escherichia coli ECRC98 0.99 JDDGAC_01500 astE succinylglutamate desuccinylase 1.00 JDDGAC_22910 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS09725 succinylglutamate desuccinylase 1.00 ECOLIN_RS16390 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli ECRC102 0.99 NIAGMN_01140 astE succinylglutamate desuccinylase 1.00 NIAGMN_17045 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli ECOR38 0.99 HEPCGN_05290 astE succinylglutamate desuccinylase 1.00 HEPCGN_18585 Ribosomal RNA small subunit methyltransferase E low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF3496 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.93 GFF3048 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) low > 78
Enterobacter asburiae PDN3 0.61 EX28DRAFT_1748 succinylglutamate desuccinylase (EC 3.5.1.96) 0.89 EX28DRAFT_2984 RNA methyltransferase, RsmE family — —
Klebsiella michiganensis M5al 0.60 BWI76_RS11690 succinylglutamate desuccinylase 0.86 BWI76_RS24070 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 92
Enterobacter sp. TBS_079 0.59 MPMX20_01869 Succinylglutamate desuccinylase 0.89 MPMX20_03804 Ribosomal RNA small subunit methyltransferase E low > 85
Pantoea sp. MT58 0.57 IAI47_11075 succinylglutamate desuccinylase 0.82 IAI47_03620 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 76
Serratia liquefaciens MT49 0.47 IAI46_15315 succinylglutamate desuccinylase 0.83 IAI46_21385 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 86
Rahnella sp. WP5 0.45 EX31_RS17390 succinylglutamate desuccinylase 0.85 EX31_RS02660 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 89
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS07720 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) 0.34 BPHYT_RS16855 16S rRNA methyltransferase low > 109
Acinetobacter radioresistens SK82 0.42 MPMX26_02247 Succinylglutamate desuccinylase 0.35 MPMX26_01001 Ribosomal RNA small subunit methyltransferase E low > 36
Paraburkholderia graminis OAS925 0.41 ABIE53_001774 succinylglutamate desuccinylase 0.32 ABIE53_003540 16S rRNA (uracil1498-N3)-methyltransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_06483 succinylglutamate desuccinylase 0.33 H281DRAFT_06311 16S rRNA (uracil1498-N3)-methyltransferase low > 103
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS23350 succinylglutamate desuccinylase 0.33 QEN71_RS27020 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 153
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_1977 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) 0.41 PfGW456L13_1043 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_02995 succinylglutamate desuccinylase 0.42 AO353_08050 16S rRNA methyltransferase low > 101
Pseudomonas simiae WCS417 0.33 PS417_21680 succinylglutamate desuccinylase 0.41 PS417_26545 16S rRNA methyltransferase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_3559 succinylglutamate desuccinylase 0.40 Psyr_0453 16S rRNA m(3)U-1498 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_3559 succinylglutamate desuccinylase 0.40 Psyr_0453 16S rRNA m(3)U-1498 methyltransferase low > 86
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_18755 succinylglutamate desuccinylase 0.41 AO356_13565 16S rRNA methyltransferase low > 104
Pseudomonas sp. RS175 0.32 PFR28_03277 Succinylglutamate desuccinylase 0.42 PFR28_04209 Ribosomal RNA small subunit methyltransferase E low > 88
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_5671 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.41 Pf6N2E2_4630 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) low > 103
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_3447 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.40 Pf1N1B4_2376 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) — —
Pseudomonas fluorescens SBW25 0.31 PFLU_RS23285 succinylglutamate desuccinylase 0.42 PFLU_RS28200 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 109
Pseudomonas putida KT2440 0.31 PP_4475 succinylglutamate desuccinylase 0.41 PP_4985 16S rRNA m3U1498 methyltransferase low > 96
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS23285 succinylglutamate desuccinylase 0.42 PFLU_RS28200 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 109
Pseudomonas sp. S08-1 0.31 OH686_21320 succinylglutamate desuccinylase 0.39 OH686_10855 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Alteromonas macleodii MIT1002 0.30 MIT1002_01538 Succinylglutamate desuccinylase 0.45 MIT1002_03054 Ribosomal RNA small subunit methyltransferase E — —
Shewanella oneidensis MR-1 0.28 SO2338 astE succinylglutamate desuccinylase (NCBI ptt file) 0.68 SO0832 conserved hypothetical protein TIGR00046 (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.28 Sama_1708 succinylglutamate desuccinylase (RefSeq) 0.66 Sama_0575 16S ribosomal RNA methyltransferase RsmE (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_1551 succinylglutamate desuccinylase (EC 3.5.1.96) 0.43 B158DRAFT_0180 RNA methyltransferase, RsmE family — —
Shewanella sp. ANA-3 0.27 Shewana3_2132 succinylglutamate desuccinylase (RefSeq) 0.68 Shewana3_3444 16S ribosomal RNA methyltransferase RsmE (RefSeq) low > 73
Marinobacter adhaerens HP15 0.26 HP15_3034 succinylglutamate desuccinylase 0.46 HP15_2926 ribosomal RNA small subunit methyltransferase E low > 73
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_06280 succinylglutamate desuccinylase 0.68 CSW01_02495 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 62
Pseudomonas stutzeri RCH2 0.22 Psest_2717 Succinylglutamate desuccinylase 0.40 Psest_0305 RNA methyltransferase, RsmE family low > 67

Not shown: 0 genomes with orthologs for BNILDI_16225 only; 54 genomes with orthologs for BNILDI_09730 only