| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Kangiella aquimarina DSM 16071 | 1.0 | B158DRAFT_0521 | | PEP-CTERM-box response regulator transcription factor | 1.0 | B158DRAFT_0533 | | Xaa-Pro aminopeptidase | 0.74 | 17 |
| Herbaspirillum seropedicae SmR1 | 0.58 | HSERO_RS13700 | | Fis family transcriptional regulator | 0.40 | HSERO_RS03510 | | proline aminopeptidase P II | low | > 78 |
| Alteromonas macleodii MIT1002 | 0.57 | MIT1002_03048 | | Transcriptional regulatory protein ZraR | 0.44 | MIT1002_02984 | | Xaa-Pro aminopeptidase | low | > 70 |
| Marinobacter adhaerens HP15 | 0.55 | HP15_1891 | | two component, sigma54 specific, transcriptional regulator, Fis family | 0.56 | HP15_3203 | | proline aminopeptidase P II | low | > 73 |
| Rhodanobacter denitrificans MT42 | 0.53 | LRK55_RS12970 | | PEP-CTERM-box response regulator transcription factor | 0.50 | LRK55_RS11420 | | aminopeptidase P N-terminal domain-containing protein | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.53 | LRK54_RS13270 | | PEP-CTERM-box response regulator transcription factor | 0.50 | LRK54_RS11695 | | aminopeptidase P N-terminal domain-containing protein | low | > 59 |
| Escherichia coli BW25113 | 0.35 | b2220 | atoC | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) | 0.45 | b2908 | pepP | proline aminopeptidase P II (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.35 | OHPLBJKB_01490 | | Regulatory protein AtoC | 0.45 | OHPLBJKB_00807 | | Xaa-Pro aminopeptidase | low | > 73 |
| Escherichia coli BL21 | 0.35 | ECD_02147 | | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | 0.45 | ECD_02740 | | proline aminopeptidase P II | low | > 61 |
| Escherichia coli ECOR38 | 0.35 | HEPCGN_22430 | atoC | acetoacetate metabolism transcriptional regulator AtoC | 0.45 | HEPCGN_18795 | pepP | Xaa-Pro aminopeptidase | low | > 87 |
| Escherichia fergusonii Becca | 0.35 | EFB2_01635 | | Regulatory protein AtoC | 0.45 | EFB2_00994 | | Xaa-Pro aminopeptidase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.35 | ECOLIN_RS12965 | | acetoacetate metabolism transcriptional regulator AtoC | 0.45 | ECOLIN_RS16190 | | Xaa-Pro aminopeptidase | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.34 | HMPREF1058_RS01145 | | sigma-54-dependent Fis family transcriptional regulator | 0.19 | HMPREF1058_RS14845 | | aminopeptidase P family protein | low | > 67 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.33 | Echvi_2422 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | 0.23 | Echvi_0053 | | Xaa-Pro aminopeptidase | low | > 79 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.33 | Psyr_0263 | | Two-component response regulator AlgB | 0.58 | Psyr_0321 | | aminopeptidase P, Metallo peptidase, MEROPS family M24B | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.33 | Psyr_0263 | | Two-component response regulator AlgB | 0.58 | Psyr_0321 | | aminopeptidase P, Metallo peptidase, MEROPS family M24B | low | > 86 |
| Pseudomonas stutzeri RCH2 | 0.33 | Psest_0192 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | 0.58 | Psest_0175 | | Xaa-Pro aminopeptidase | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.33 | ABI39_RS16590 | | sigma-54-dependent Fis family transcriptional regulator | 0.19 | ABI39_RS10560 | | aminopeptidase P family protein | low | > 72 |
| Bacteroides ovatus ATCC 8483 | 0.33 | BACOVA_02581 | | Sigma-54 interaction domain protein | 0.18 | BACOVA_01617 | | peptidase, M24 family | low | > 94 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.33 | BT0856 | | two-component system response regulator (NCBI ptt file) | 0.17 | BT2522 | | Xaa-Pro aminopeptidase (NCBI ptt file) | low | > 81 |
| Pseudomonas putida KT2440 | 0.33 | PP_0133 | | Alginate biosynthesis transcriptional regulatory protein AlgB | 0.58 | PP_5200 | | proline aminopeptidase P II | low | > 96 |
| Dechlorosoma suillum PS | 0.33 | Dsui_2360 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | 0.40 | Dsui_1591 | | Xaa-Pro aminopeptidase | low | > 51 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.32 | GFF2455 | | Putative sensory histidine kinase YfhA | 0.44 | GFF3009 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | low | > 78 |
| Escherichia coli ECRC62 | 0.32 | BNILDI_06055 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.45 | BNILDI_09950 | pepP | Xaa-Pro aminopeptidase | low | > 75 |
| Escherichia coli ECRC102 | 0.32 | NIAGMN_11070 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.45 | NIAGMN_17270 | pepP | Xaa-Pro aminopeptidase | — | — |
| Escherichia coli ECRC101 | 0.32 | MCAODC_03820 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.45 | MCAODC_10025 | pepP | Xaa-Pro aminopeptidase | low | > 87 |
| Escherichia coli ECRC99 | 0.32 | KEDOAH_14840 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.45 | KEDOAH_08635 | pepP | Xaa-Pro aminopeptidase | — | — |
| Dickeya dadantii 3937 | 0.32 | DDA3937_RS20820 | | two-component system response regulator VfmH | 0.46 | DDA3937_RS02395 | | Xaa-Pro aminopeptidase | low | > 74 |
| Escherichia coli ECOR27 | 0.32 | NOLOHH_05465 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.45 | NOLOHH_11415 | pepP | Xaa-Pro aminopeptidase | 0.69 | 3 |
| Klebsiella michiganensis M5al | 0.32 | BWI76_RS21250 | | two-component system response regulator GlrR | 0.46 | BWI76_RS23895 | | Xaa-Pro aminopeptidase | low | > 92 |
| Parabacteroides merdae CL09T00C40 | 0.32 | HMPREF1078_RS12140 | | sigma-54 dependent transcriptional regulator | 0.15 | HMPREF1078_RS02325 | | Xaa-Pro aminopeptidase | low | > 61 |
| Acidovorax sp. GW101-3H11 | 0.32 | Ac3H11_4011 | | Putative sensory histidine kinase YfhA | 0.34 | Ac3H11_652 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | low | > 79 |
| Dickeya dianthicola 67-19 | 0.32 | HGI48_RS00425 | | two-component system response regulator VfmH | 0.45 | HGI48_RS02350 | | Xaa-Pro aminopeptidase | low | > 71 |
| Dickeya dianthicola ME23 | 0.32 | DZA65_RS00425 | | sigma-54-dependent Fis family transcriptional regulator | 0.45 | DZA65_RS02455 | | Xaa-Pro aminopeptidase | low | > 75 |
| Enterobacter sp. TBS_079 | 0.32 | MPMX20_03423 | | Transcriptional regulatory protein QseF | 0.45 | MPMX20_03767 | | Xaa-Pro aminopeptidase | low | > 85 |
| Escherichia coli ECRC100 | 0.32 | OKFHMN_13320 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.45 | OKFHMN_19505 | pepP | Xaa-Pro aminopeptidase | low | > 80 |
| Escherichia coli ECRC98 | 0.32 | JDDGAC_16945 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.45 | JDDGAC_23145 | pepP | Xaa-Pro aminopeptidase | low | > 86 |
| Variovorax sp. OAS795 | 0.31 | ABID97_RS06460 | | sigma 54-interacting transcriptional regulator | 0.37 | ABID97_RS02460 | | aminopeptidase P N-terminal domain-containing protein | low | > 91 |
| Variovorax sp. SCN45 | 0.31 | GFF7323 | | Transcriptional response regulatory protein GlrR | 0.38 | GFF7179 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | low | > 127 |
| Shewanella loihica PV-4 | 0.31 | Shew_2341 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | 0.38 | Shew_2358 | | peptidase M24 (RefSeq) | low | > 60 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.31 | GFF610 | | Putative sensory histidine kinase YfhA | 0.35 | GFF2485 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | low | > 90 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.31 | CA264_16520 | | DNA-binding response regulator | 0.27 | CA264_20445 | | peptidase M24 family protein | low | > 74 |
| Enterobacter asburiae PDN3 | 0.31 | EX28DRAFT_0096 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | 0.44 | EX28DRAFT_2960 | | Xaa-Pro aminopeptidase | low | > 76 |
| Rahnella sp. WP5 | 0.31 | EX31_RS20615 | | two-component system response regulator GlrR | 0.45 | EX31_RS21495 | | Xaa-Pro aminopeptidase | low | > 89 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.31 | CA265_RS04165 | | sigma-54-dependent Fis family transcriptional regulator | 0.24 | CA265_RS22815 | | X-Pro aminopeptidase | low | > 88 |
| Shewanella amazonensis SB2B | 0.31 | Sama_2213 | | response regulator receiver protein (RefSeq) | 0.37 | Sama_1534 | | xaa-pro aminopeptidase (RefSeq) | low | > 62 |
| Pseudomonas sp. S08-1 | 0.31 | OH686_12145 | | Alginate biosynthesis two-component system response regulator AlgB | 0.58 | OH686_11205 | | Xaa-Pro aminopeptidase | low | > 80 |
| Serratia liquefaciens MT49 | 0.31 | IAI46_19460 | | two-component system response regulator GlrR | 0.47 | IAI46_20875 | | Xaa-Pro aminopeptidase | low | > 86 |
| Acinetobacter radioresistens SK82 | 0.31 | MPMX26_01292 | | DNA-binding transcriptional regulator NtrC | 0.47 | MPMX26_02286 | | Xaa-Pro aminopeptidase | low | > 36 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.30 | ABZR88_RS13070 | | sigma-54 dependent transcriptional regulator | 0.24 | ABZR88_RS17305 | | aminopeptidase P N-terminal domain-containing protein | low | > 71 |
| Pantoea sp. MT58 | 0.30 | IAI47_04945 | | two-component system response regulator GlrR | 0.45 | IAI47_03750 | | Xaa-Pro aminopeptidase | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.30 | HER17_RS05925 | | two-component system response regulator GlrR | 0.46 | HER17_RS19115 | | Xaa-Pro aminopeptidase | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.30 | LU632_RS17930 | glrR | two-component system response regulator GlrR | 0.45 | LU632_RS05880 | pepP | Xaa-Pro aminopeptidase | low | > 74 |
| Bacteroides stercoris CC31F | 0.28 | HMPREF1181_RS03655 | | sigma-54-dependent Fis family transcriptional regulator | 0.17 | HMPREF1181_RS00920 | | aminopeptidase P family protein | low | > 56 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.28 | Xcc-8004.252.1 | | Nitrogen regulation protein NtrC | 0.47 | Xcc-8004.1147.1 | | Xaa-Pro aminopeptidase (EC 3.4.11.9) | low | > 74 |
Not shown: 19 genomes with orthologs for B158DRAFT_0521 only; 25 genomes with orthologs for B158DRAFT_0533 only