Conservation of cofitness between Atu3289 and Atu3483 in Agrobacterium fabrum C58

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3289 thiamine-phosphate pyrophosphorylase 1.0 Atu3483 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.74 7
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU2362 thiE-2 thiamine-phosphate pyrophosphorylase (TIGR) 0.44 DVU2446 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.29 DvMF_3007 thiE thiamine-phosphate pyrophosphorylase (RefSeq) 0.41 DvMF_2949 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) low > 51
Rhizobium sp. OAE497 0.28 ABIE40_RS25925 thiamine phosphate synthase 0.74 ABIE40_RS09465 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 107
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS17410 thiamine phosphate synthase 0.32 ABZR86_RS00815 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Rhodanobacter sp. FW510-T8 0.22 OKGIIK_17095 Thiamine-phosphate synthase 0.32 OKGIIK_03885 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 52
Bacteroides thetaiotaomicron VPI-5482 0.22 BT0652 putative thiamine-phosphate pyrophosphorylase (NCBI ptt file) 0.37 BT0698 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.21 BACOVA_02360 thiamine-phosphate diphosphorylase 0.37 BACOVA_02402 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Lysobacter sp. OAE881 0.20 ABIE51_RS17410 thiamine phosphate synthase 0.31 ABIE51_RS08025 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Bacteroides stercoris CC31F 0.20 HMPREF1181_RS14675 thiamine phosphate synthase 0.38 HMPREF1181_RS16225 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.20 ABZR88_RS08830 thiamine phosphate synthase 0.41 ABZR88_RS17835 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.20 AO353_06355 thiamine-phosphate pyrophosphorylase 0.50 AO353_15155 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 101
Pseudomonas sp. S08-1 0.20 OH686_09190 Thiamin-phosphate pyrophosphorylase 0.31 OH686_17245 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS17750 thiamine phosphate synthase 0.39 ABI39_RS14025 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Pseudomonas simiae WCS417 0.20 PS417_24605 thiamine-phosphate pyrophosphorylase 0.50 PS417_18980 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 88
Phocaeicola vulgatus CL09T03C04 0.20 HMPREF1058_RS03290 thiamine phosphate synthase 0.39 HMPREF1058_RS17810 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Pseudomonas fluorescens SBW25 0.19 PFLU_RS26535 thiamine phosphate synthase 0.33 PFLU_RS25750 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.79 54
Marinobacter adhaerens HP15 0.19 HP15_348 thiamine-phosphate pyrophosphorylase 0.30 HP15_324 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS26535 thiamine phosphate synthase 0.33 PFLU_RS25750 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.31 62
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_4341 thiamine-phosphate diphosphorylase 0.29 Psyr_0828 ketopantoate hydroxymethyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_4341 thiamine-phosphate diphosphorylase 0.29 Psyr_0828 ketopantoate hydroxymethyltransferase 0.54 22
Pseudomonas sp. RS175 0.19 PFR28_03844 Thiamine-phosphate synthase 0.31 PFR28_03721 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_0216 thiamine-phosphate pyrophosphorylase 0.39 Echvi_1836 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Pseudomonas stutzeri RCH2 0.19 Psest_0536 thiamine-phosphate pyrophosphorylase 0.28 Psest_0996 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.19 Pf6N2E2_5023 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.31 Pf6N2E2_5153 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 103
Pseudomonas fluorescens FW300-N1B4 0.19 Pf1N1B4_2717 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.34 Pf1N1B4_4330 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) — —
Mycobacterium tuberculosis H37Rv 0.19 Rv0414c Thiamine-phosphate pyrophosphorylase ThiE (TMP pyrophosphorylase) (TMP-PPASE) (thiamine-phosphate synthase) 0.39 Rv2225 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB — —
Pedobacter sp. GW460-11-11-14-LB5 0.19 CA265_RS20175 thiamine-phosphate diphosphorylase 0.42 CA265_RS15235 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Phaeobacter inhibens DSM 17395 0.19 PGA1_c09050 thiamine-phosphate pyrophosphorylase ThiE 0.55 PGA1_c32050 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB — —
Pseudomonas fluorescens FW300-N2C3 0.18 AO356_15430 thiamine-phosphate pyrophosphorylase 0.37 AO356_09950 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 104
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_1384 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.32 PfGW456L13_1521 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 87
Rhodanobacter denitrificans MT42 0.17 LRK55_RS06320 thiamine phosphate synthase 0.33 LRK55_RS14830 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.17 LRK54_RS06575 thiamine phosphate synthase 0.34 LRK54_RS15115 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Serratia liquefaciens MT49 0.16 IAI46_01315 thiamine phosphate synthase 0.30 IAI46_21240 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Burkholderia phytofirmans PsJN 0.16 BPHYT_RS17770 thiamine-phosphate pyrophosphorylase 0.36 BPHYT_RS03605 3-methyl-2-oxobutanoate hydroxymethyltransferase — —

Not shown: 3 genomes with orthologs for Atu3289 only; 64 genomes with orthologs for Atu3483 only