Conservation of cofitness between Atu2238 and Atu1074 in Agrobacterium fabrum C58

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2238 ubiquinol-cytochrome c reductase cytochrome b subunit 1.0 Atu1074 NAD/NADP dependent oxidoreductase 0.80 2
Sinorhizobium meliloti 1021 0.92 SMc00188 cytochrome B transmembrane protein 0.81 SMc00553 oxidoreductase
Rhizobium sp. OAE497 0.91 ABIE40_RS13125 cytochrome b N-terminal domain-containing protein 0.83 ABIE40_RS06265 SDR family NAD(P)-dependent oxidoreductase 0.61 41
Caulobacter crescentus NA1000 0.65 CCNA_00506 cytochrome b 0.48 CCNA_01728 short chain dehydrogenase 0.76 66
Caulobacter crescentus NA1000 Δfur 0.65 CCNA_00506 cytochrome b 0.48 CCNA_01728 short chain dehydrogenase low > 67
Bosea sp. OAE506 0.65 ABIE41_RS11195 cytochrome b/b6 0.54 ABIE41_RS17815 SDR family NAD(P)-dependent oxidoreductase low > 77
Sphingomonas koreensis DSMZ 15582 0.62 Ga0059261_3220 Cytochrome b subunit of the bc complex 0.39 Ga0059261_3625 Short-chain dehydrogenases of various substrate specificities 0.65 9
Azospirillum sp. SherDot2 0.61 MPMX19_05013 Cytochrome b 0.44 MPMX19_00907 putative oxidoreductase YciK low > 112
Azospirillum brasilense Sp245 0.59 AZOBR_RS20750 cytochrome B 0.47 AZOBR_RS08305 oxidoreductase 0.40 58
Phaeobacter inhibens DSM 17395 0.58 PGA1_c33990 cytochrome b 0.27 PGA1_c10780 putative short chain dehydrogenase
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS02565 cytochrome b N-terminal domain-containing protein 0.49 A4249_RS03730 SDR family NAD(P)-dependent oxidoreductase low > 48
Dinoroseobacter shibae DFL-12 0.57 Dshi_3277 Cytochrome b/b6 domain (RefSeq) 0.35 Dshi_2135 short-chain dehydrogenase/reductase SDR (RefSeq)
Rhodospirillum rubrum S1H 0.56 Rru_A0363 Cytochrome b/b6-like (NCBI) 0.51 Rru_A0403 Short-chain dehydrogenase/reductase SDR (NCBI)
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_15250 cytochrome B 0.29 AO353_02105 3-oxoacyl-ACP reductase
Alteromonas macleodii MIT1002 0.39 MIT1002_00815 Cytochrome b/c1 0.29 MIT1002_01965 putative oxidoreductase YciK low > 70
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_1635 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) 0.29 PfGW456L13_2169 Oxidoreductase, short chain dehydrogenase/reductase family 0.64 14
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_961 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) 0.29 Pf1N1B4_358 Oxidoreductase, short chain dehydrogenase/reductase family 0.43 16
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_5338 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) 0.27 Pf6N2E2_2527 Oxidoreductase, short chain dehydrogenase/reductase family 0.58 14
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_17070 cytochrome B 0.27 AO356_03500 3-oxoacyl-ACP reductase 0.67 6
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_2101 Cytochrome b subunit of the bc complex 0.34 B158DRAFT_2314 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) low > 40
Pseudomonas putida KT2440 0.39 PP_1318 Cytochrome b 0.29 PP_1763 putative oxidoreductase 0.38 36
Marinobacter adhaerens HP15 0.39 HP15_546 ubiquinol-cytochrome c reductase, cytochrome b 0.30 HP15_1225 oxidoreductase, short chain dehydrogenase/reductase family
Pseudomonas sp. RS175 0.39 PFR28_03605 Cytochrome b 0.27 PFR28_00899 putative oxidoreductase YciK
Shewanella amazonensis SB2B 0.39 Sama_3020 ubiquinol-cytochrome c reductase, cytochrome b (RefSeq) 0.30 Sama_2121 short chain dehydrogenase (RefSeq) 0.62 26
Pseudomonas sp. S08-1 0.39 OH686_08385 Ubiquinol-cytochrome C reductase, cytochrome B subunit 0.28 OH686_20835 Oxidoreductase, short-chain dehydrogenase/reductase family
Pseudomonas fluorescens SBW25 0.38 PFLU_RS04200 cytochrome bc complex cytochrome b subunit 0.28 PFLU_RS08060 YciK family oxidoreductase low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS04200 cytochrome bc complex cytochrome b subunit 0.28 PFLU_RS08060 YciK family oxidoreductase low > 109
Pseudomonas simiae WCS417 0.38 PS417_04160 cytochrome B 0.28 PS417_08090 3-oxoacyl-ACP reductase
Pseudomonas stutzeri RCH2 0.38 Psest_3278 Cytochrome b subunit of the bc complex 0.29 Psest_2000 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Shewanella loihica PV-4 0.38 Shew_0571 cytochrome b/b6 domain-containing protein (RefSeq) 0.31 Shew_2409 short chain dehydrogenase (RefSeq) 0.49 29
Shewanella oneidensis MR-1 0.38 SO0609 petB ubiquinol-cytochrome c reductase, cytochrome b (NCBI ptt file) 0.29 SO2935 oxidoreductase, short-chain dehydrogenase/reductase family (NCBI ptt file) 0.64 11
Shewanella sp. ANA-3 0.38 Shewana3_0602 cytochrome b/b6 domain-containing protein (RefSeq) 0.28 Shewana3_1528 short chain dehydrogenase (RefSeq) 0.69 23
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_03050 cytochrome b 0.32 CSW01_05390 YciK family oxidoreductase 0.45 56
Rhodanobacter denitrificans MT42 0.36 LRK55_RS13485 cytochrome bc complex cytochrome b subunit 0.19 LRK55_RS13545 SDR family NAD(P)-dependent oxidoreductase low > 63
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_03010 qcrB,petB cytochrome b 0.19 OKGIIK_03065 yqjQ Short-chain dehydrogenase

Not shown: 21 genomes with orthologs for Atu2238 only; 30 genomes with orthologs for Atu1074 only