Conservation of cofitness between Atu0690 and Atu0360 in Agrobacterium fabrum C58

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0690 hypothetical protein 1.0 Atu0360 apolipoprotein N-acyltransferase 0.29 5
Rhizobium sp. OAE497 0.81 ABIE40_RS03765 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.64 ABIE40_RS01685 apolipoprotein N-acyltransferase low > 107
Sinorhizobium meliloti 1021 0.72 SMc00902 hypothetical protein 0.59 SMc01111 apolipoprotein N-acyltransferase — —
Bosea sp. OAE506 0.56 ABIE41_RS23215 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.34 ABIE41_RS04515 apolipoprotein N-acyltransferase low > 77
Rhodopseudomonas palustris CGA009 0.48 TX73_005985 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.37 TX73_002305 apolipoprotein N-acyltransferase low > 86
Phaeobacter inhibens DSM 17395 0.44 PGA1_c29260 ribosomal RNA small subunit methyltransferase D 0.21 PGA1_c04770 apolipoprotein N-acyltransferase Int — —
Caulobacter crescentus NA1000 0.44 CCNA_00227 methyltransferase 0.23 CCNA_00050 apolipoprotein N-acyltransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_00227 methyltransferase 0.23 CCNA_00050 apolipoprotein N-acyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS04215 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.23 A4249_RS14705 apolipoprotein N-acyltransferase — —
Azospirillum brasilense Sp245 0.37 AZOBR_RS04500 methyltransferase 0.28 AZOBR_RS01455 acyltransferase — —
Dinoroseobacter shibae DFL-12 0.34 Dshi_0115 putative methyltransferase (RefSeq) 0.24 Dshi_3951 apolipoprotein N-acyltransferase (RefSeq) — —
Azospirillum sp. SherDot2 0.33 MPMX19_01626 Ribosomal RNA small subunit methyltransferase D 0.29 MPMX19_02515 Apolipoprotein N-acyltransferase — —
Magnetospirillum magneticum AMB-1 0.33 AMB_RS20860 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.27 AMB_RS22605 apolipoprotein N-acyltransferase — —
Rhodospirillum rubrum S1H 0.33 Rru_A0653 hypothetical protein (NCBI) 0.25 Rru_A3774 Apolipoprotein N-acyltransferase (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_0246 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.16 Ga0059261_1614 apolipoprotein N-acyltransferase — —
Dickeya dianthicola 67-19 0.28 HGI48_RS20760 16S rRNA (guanine(966)-N(2))-methyltransferase 0.15 HGI48_RS06275 apolipoprotein N-acyltransferase — —
Desulfovibrio vulgaris Miyazaki F 0.28 DvMF_0172 methyltransferase (RefSeq) 0.16 DvMF_0554 lnt apolipoprotein N-acyltransferase (RefSeq) — —
Dickeya dianthicola ME23 0.28 DZA65_RS21770 16S rRNA (guanine(966)-N(2))-methyltransferase 0.15 DZA65_RS06620 apolipoprotein N-acyltransferase — —
Dickeya dadantii 3937 0.27 DDA3937_RS00630 16S rRNA (guanine(966)-N(2))-methyltransferase 0.16 DDA3937_RS06230 apolipoprotein N-acyltransferase — —
Shewanella oneidensis MR-1 0.27 SO4587 conserved hypothetical protein TIGR00095 (NCBI ptt file) 0.13 SO1177 cutE apolipoprotein N-acyltransferase (NCBI ptt file) — —
Marinobacter adhaerens HP15 0.27 HP15_3491 conserved hypothetical protein 0.14 HP15_2471 apolipoprotein N-acyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_00238 Ribosomal RNA small subunit methyltransferase D 0.15 OHPLBJKB_03055 Apolipoprotein N-acyltransferase — —
Shewanella sp. ANA-3 0.26 Shewana3_3973 putative methyltransferase (RefSeq) 0.14 Shewana3_1004 apolipoprotein N-acyltransferase (RefSeq) — —
Escherichia fergusonii Becca 0.26 EFB2_00351 Ribosomal RNA small subunit methyltransferase D 0.15 EFB2_03442 Apolipoprotein N-acyltransferase — —
Escherichia coli ECRC62 0.26 BNILDI_03015 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.15 BNILDI_21630 lnt apolipoprotein N-acyltransferase — —
Escherichia coli ECOR38 0.26 HEPCGN_15525 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.15 HEPCGN_00985 lnt apolipoprotein N-acyltransferase — —
Escherichia coli BW25113 0.26 b3465 yhhF predicted methyltransferase (NCBI) 0.15 b0657 lnt apolipoprotein N-acyltransferase (NCBI) — —
Escherichia coli ECOR27 0.26 NOLOHH_08500 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.15 NOLOHH_23625 lnt apolipoprotein N-acyltransferase — —
Escherichia coli Nissle 1917 0.26 ECOLIN_RS19815 16S rRNA (guanine(966)-N(2))-methyltransferase 0.15 ECOLIN_RS03535 apolipoprotein N-acyltransferase — —
Pectobacterium carotovorum WPP14 0.26 HER17_RS00465 16S rRNA (guanine(966)-N(2))-methyltransferase 0.14 HER17_RS15185 apolipoprotein N-acyltransferase — —
Pantoea sp. MT58 0.26 IAI47_01535 16S rRNA (guanine(966)-N(2))-methyltransferase 0.12 IAI47_13965 apolipoprotein N-acyltransferase — —
Escherichia coli ECRC101 0.25 OKFHMN_16695 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.15 OKFHMN_07245 lnt apolipoprotein N-acyltransferase — —
Escherichia coli ECRC98 0.25 JDDGAC_20325 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.15 JDDGAC_10890 lnt apolipoprotein N-acyltransferase — —
Escherichia coli ECRC101 0.25 MCAODC_07225 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.15 MCAODC_26460 lnt apolipoprotein N-acyltransferase — —
Escherichia coli ECRC102 0.25 NIAGMN_14465 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.15 NIAGMN_05300 lnt apolipoprotein N-acyltransferase — —
Escherichia coli ECRC99 0.25 KEDOAH_11445 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.15 KEDOAH_20725 lnt apolipoprotein N-acyltransferase — —
Shewanella amazonensis SB2B 0.25 Sama_3469 hypothetical protein (RefSeq) 0.13 Sama_2579 apolipoprotein N-acyltransferase (RefSeq) — —
Escherichia coli BL21 0.25 ECD_03314 16S rRNA m(2)G966 methyltransferase, SAM-dependent 0.13 ECD_00625 apolipoprotein N-acyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_4754 16S rRNA m(2)G-966 methyltransferase 0.13 Psyr_4349 Apolipoprotein N-acyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_4754 16S rRNA m(2)G-966 methyltransferase 0.13 Psyr_4349 Apolipoprotein N-acyltransferase — —
Pseudomonas sp. S08-1 0.25 OH686_14220 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.12 OH686_09235 apolipoprotein N-acyltransferase — —
Klebsiella michiganensis M5al 0.25 BWI76_RS26405 16S rRNA (guanine(966)-N(2))-methyltransferase 0.14 BWI76_RS08115 apolipoprotein N-acyltransferase — —
Serratia liquefaciens MT49 0.25 IAI46_00920 16S rRNA (guanine(966)-N(2))-methyltransferase 0.13 IAI46_06000 apolipoprotein N-acyltransferase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.24 ABZR88_RS07045 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.09 ABZR88_RS19020 apolipoprotein N-acyltransferase low > 71
Enterobacter sp. TBS_079 0.24 MPMX20_04342 Ribosomal RNA small subunit methyltransferase D 0.14 MPMX20_01307 Apolipoprotein N-acyltransferase — —
Rahnella sp. WP5 0.24 EX31_RS14835 16S rRNA (guanine(966)-N(2))-methyltransferase 0.14 EX31_RS23180 apolipoprotein N-acyltransferase — —
Enterobacter asburiae PDN3 0.24 EX28DRAFT_4299 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.15 EX28DRAFT_2314 apolipoprotein N-acyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF540 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) 0.14 GFF4574 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE — —
Pseudomonas putida KT2440 0.24 PP_5114 putative adenine methyltransferase 0.15 PP_4790 Apolipoprotein N-acyltransferase — —
Shewanella loihica PV-4 0.23 Shew_3607 putative methyltransferase (RefSeq) 0.14 Shew_2927 apolipoprotein N-acyltransferase (RefSeq) — —

Not shown: 17 genomes with orthologs for Atu0690 only; 24 genomes with orthologs for Atu0360 only