Conservation of cofitness between Atu1739 and Atu0045 in Agrobacterium fabrum C58

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1739 permease 1.0 Atu0045 heat shock chaperone 0.48 2
Rhizobium sp. OAE497 0.69 ABIE40_RS09660 AI-2E family transporter 0.94 ABIE40_RS19475 ATP-dependent protease ATPase subunit HslU low > 107
Sinorhizobium meliloti 1021 0.67 SMc02160 ABC transporter permease 0.87 SMc02577 ATP-dependent protease ATP-binding subunit HslU — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.51 GFF3026 putative membrane protein 0.56 GFF553 ATP-dependent hsl protease ATP-binding subunit HslU low > 90
Shewanella sp. ANA-3 0.51 Shewana3_0477 hypothetical protein (RefSeq) 0.57 Shewana3_3700 hslU ATP-dependent protease ATP-binding subunit HslU (RefSeq) low > 73
Shewanella oneidensis MR-1 0.50 SO0472 membrane protein, putative (NCBI ptt file) 0.57 SO4163 hslU heat shock protein HslVU, ATPase subunit HslU (NCBI ptt file) low > 76
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_05390 Predicted PurR-regulated permease PerM 0.57 H281DRAFT_02207 ATP-dependent HslUV protease ATP-binding subunit HslU low > 103
Paraburkholderia graminis OAS925 0.20 ABIE53_006439 putative PurR-regulated permease PerM 0.57 ABIE53_000421 ATP-dependent HslUV protease ATP-binding subunit HslU low > 113
Burkholderia phytofirmans PsJN 0.19 BPHYT_RS24555 membrane protein 0.57 BPHYT_RS01630 ATP-dependent protease ATPase subunit HslU — —
Cupriavidus basilensis FW507-4G11 0.16 RR42_RS03900 membrane protein 0.58 RR42_RS01065 ATP-dependent protease ATP-binding subunit HslU low > 128
Pseudomonas putida KT2440 0.15 PP_4162 conserved membrane protein of unknown function 0.57 PP_5001 protease HslVU, ATPase component low > 96
Pseudomonas fluorescens FW300-N2C3 0.15 AO356_19830 hypothetical protein 0.57 AO356_09460 ATP-dependent protease ATP-binding subunit HslU low > 104
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS09095 AI-2E family transporter 0.56 PFLU_RS01960 ATP-dependent protease ATPase subunit HslU low > 109
Pseudomonas fluorescens SBW25 0.15 PFLU_RS09095 AI-2E family transporter 0.56 PFLU_RS01960 ATP-dependent protease ATPase subunit HslU low > 109
Pseudomonas sp. RS175 0.15 PFR28_03068 Putative transport protein YdiK 0.57 PFR28_04998 ATP-dependent protease ATPase subunit HslU low > 88
Pseudomonas simiae WCS417 0.14 PS417_09040 hypothetical protein 0.56 PS417_01915 ATP-dependent protease ATP-binding subunit HslU low > 88
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_5882 Putative membrane protein 0.57 Pf6N2E2_3770 ATP-dependent hsl protease ATP-binding subunit HslU low > 103
Rhodopseudomonas palustris CGA009 0.13 TX73_002840 AI-2E family transporter 0.75 TX73_001590 ATP-dependent protease ATPase subunit HslU low > 86
Pseudomonas sp. S08-1 0.13 OH686_01920 Uncharacterized UPF0118 membrane protein 0.56 OH686_10100 ATP-dependent protease HslVU, ATPase subunit 0.66 12
Pseudomonas fluorescens FW300-N1B4 0.13 Pf1N1B4_3528 Putative membrane protein 0.56 Pf1N1B4_1553 ATP-dependent hsl protease ATP-binding subunit HslU — —
Pseudomonas fluorescens FW300-N2E3 0.13 AO353_01690 hypothetical protein 0.56 AO353_12425 ATP-dependent protease ATP-binding subunit HslU — —
Pseudomonas fluorescens GW456-L13 0.13 PfGW456L13_2055 Putative membrane protein 0.56 PfGW456L13_290 ATP-dependent hsl protease ATP-binding subunit HslU — —
Variovorax sp. OAS795 0.12 ABID97_RS22290 AI-2E family transporter 0.56 ABID97_RS06185 ATP-dependent protease ATPase subunit HslU low > 91
Pseudomonas stutzeri RCH2 0.12 Psest_2464 Predicted permease 0.57 Psest_3937 ATP-dependent protease HslVU, ATPase subunit low > 67
Marinobacter adhaerens HP15 0.12 HP15_593 protein belonging to uncharacterized protein family UPF0118 0.58 HP15_465 heat shock protein HslVU, ATPase subunit HslU low > 73
Castellaniella sp019104865 MT123 0.11 ABCV34_RS06025 AI-2E family transporter 0.56 ABCV34_RS13410 ATP-dependent protease ATPase subunit HslU 0.80 35
Pantoea sp. MT58 0.11 IAI47_14150 AI-2E family transporter 0.57 IAI47_00845 HslU--HslV peptidase ATPase subunit low > 76
Klebsiella michiganensis M5al 0.11 BWI76_RS19855 AI-2E family transporter 0.56 BWI76_RS00750 ATP-dependent protease ATP-binding subunit HslU low > 92
Dickeya dianthicola ME23 0.10 DZA65_RS13330 AI-2E family transporter YdiK 0.57 DZA65_RS21505 HslU--HslV peptidase ATPase subunit low > 75
Escherichia coli BW25113 0.10 b1688 ydiK predicted inner membrane protein (NCBI) 0.57 b3931 hslU ATP-dependent protease ATP-binding subunit (NCBI) 0.15 73
Escherichia coli HS(pFamp)R (ATCC 700891) 0.10 OHPLBJKB_02036 Putative transport protein YdiK 0.57 OHPLBJKB_04120 ATP-dependent protease ATPase subunit HslU low > 73
Escherichia coli ECRC62 0.10 BNILDI_16535 ydiK AI-2E family transporter YdiK 0.57 BNILDI_05645 hslU HslU--HslV peptidase ATPase subunit — —
Escherichia coli ECOR27 0.10 NOLOHH_17745 ydiK AI-2E family transporter YdiK 0.57 NOLOHH_05885 hslU HslU--HslV peptidase ATPase subunit — —
Escherichia coli BL21 0.10 ECD_01657 UPF0118 family inner membrane protein 0.57 ECD_03816 molecular chaperone and ATPase component of HslUV protease low > 60
Escherichia coli ECRC99 0.10 KEDOAH_00885 ydiK AI-2E family transporter YdiK 0.57 KEDOAH_14420 hslU HslU--HslV peptidase ATPase subunit — —
Escherichia coli Nissle 1917 0.10 ECOLIN_RS09435 AI-2E family transporter YdiK 0.57 ECOLIN_RS22635 HslU--HslV peptidase ATPase subunit — —
Escherichia coli ECRC98 0.10 JDDGAC_01800 ydiK AI-2E family transporter YdiK 0.57 JDDGAC_17365 hslU HslU--HslV peptidase ATPase subunit — —
Escherichia coli ECRC101 0.10 MCAODC_18185 ydiK AI-2E family transporter YdiK 0.57 MCAODC_04240 hslU HslU--HslV peptidase ATPase subunit — —
Escherichia coli ECRC101 0.10 OKFHMN_27225 ydiK AI-2E family transporter YdiK 0.57 OKFHMN_13740 hslU HslU--HslV peptidase ATPase subunit — —
Escherichia coli ECRC102 0.10 NIAGMN_00840 ydiK AI-2E family transporter YdiK 0.57 NIAGMN_11495 hslU HslU--HslV peptidase ATPase subunit — —
Escherichia fergusonii Becca 0.10 EFB2_02304 Putative transport protein YdiK 0.57 EFB2_04687 ATP-dependent protease ATPase subunit HslU low > 86
Escherichia coli ECOR38 0.10 HEPCGN_05610 ydiK AI-2E family transporter YdiK 0.57 HEPCGN_12385 hslU HslU--HslV peptidase ATPase subunit low > 85
Pectobacterium carotovorum WPP14 0.10 HER17_RS20960 AI-2E family transporter 0.58 HER17_RS00850 HslU--HslV peptidase ATPase subunit low > 75
Serratia liquefaciens MT49 0.10 IAI46_10470 AI-2E family transporter 0.56 IAI46_24575 HslU--HslV peptidase ATPase subunit low > 86
Dickeya dadantii 3937 0.10 DDA3937_RS12800 AI-2E family transporter YdiK 0.57 DDA3937_RS00915 HslU--HslV peptidase ATPase subunit low > 74
Ralstonia sp. UNC404CL21Col 0.09 ABZR87_RS08310 AI-2E family transporter 0.58 ABZR87_RS05120 ATP-dependent protease ATPase subunit HslU low > 80
Dickeya dianthicola 67-19 0.09 HGI48_RS12865 AI-2E family transporter YdiK 0.57 HGI48_RS20460 HslU--HslV peptidase ATPase subunit low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.09 GFF3553 Putative membrane protein 0.57 GFF2313 ATP-dependent hsl protease ATP-binding subunit HslU low > 78

Not shown: 3 genomes with orthologs for Atu1739 only; 40 genomes with orthologs for Atu0045 only