Conservation of cofitness between ABZR87_RS02600 and ABZR87_RS04980 in Ralstonia sp. UNC404CL21Col

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS02600 temperature dependent type IV pilus secretin PilQ 1.0 ABZR87_RS04980 LysM peptidoglycan-binding domain-containing protein 0.97 7
Ralstonia solanacearum PSI07 0.90 RPSI07_RS10290 type IV pilus secretin PilQ 0.80 RPSI07_RS23605 LysM peptidoglycan-binding domain-containing protein 0.87 3
Ralstonia solanacearum GMI1000 0.89 RS_RS14890 type IV pilus secretin PilQ 0.79 RS_RS00345 LysM peptidoglycan-binding domain-containing protein low > 80
Ralstonia solanacearum IBSBF1503 0.89 RALBFv3_RS06945 type IV pilus secretin PilQ 0.81 RALBFv3_RS09760 LysM peptidoglycan-binding domain-containing protein 0.82 7
Ralstonia solanacearum UW163 0.89 UW163_RS06670 type IV pilus secretin PilQ 0.81 UW163_RS03820 LysM peptidoglycan-binding domain-containing protein — —
Cupriavidus basilensis FW507-4G11 0.71 RR42_RS19015 secretin 0.55 RR42_RS20475 peptidoglycan-binding protein LysM low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF1333 Type IV pilus biogenesis protein PilQ 0.37 GFF2572 Uncharacterized protein with LysM domain, COG1652 0.55 41
Acidovorax sp. GW101-3H11 0.47 Ac3H11_4703 Type IV pilus biogenesis protein PilQ 0.37 Ac3H11_4410 Uncharacterized protein with LysM domain, COG1652 low > 79
Variovorax sp. OAS795 0.47 ABID97_RS23265 type IV pilus secretin PilQ 0.38 ABID97_RS01825 LysM peptidoglycan-binding domain-containing protein 0.99 3
Variovorax sp. SCN45 0.46 GFF5323 Type IV pilus biogenesis protein PilQ 0.39 GFF5490 Uncharacterized protein with LysM domain, COG1652 1.00 2
Dechlorosoma suillum PS 0.39 Dsui_1191 type IV pilus secretin PilQ/competence protein 0.30 Dsui_0818 LysM domain-containing protein low > 51
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein 0.21 Psyr_0020 Peptidoglycan-binding LysM low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein 0.21 Psyr_0020 Peptidoglycan-binding LysM low > 86
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_12495 fimbrial protein 0.23 AO353_10645 peptidoglycan-binding protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_1539 Type IV pilus biogenesis protein PilQ 0.22 Pf1N1B4_1911 Uncharacterized protein with LysM domain, COG1652 low > 87
Pseudomonas sp. RS175 0.33 PFR28_05011 Type 3 secretion system secretin 0.23 PFR28_04660 hypothetical protein low > 88
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_0762 type IV pilus secretin (or competence protein) PilQ 0.25 B158DRAFT_0399 LysM domain. 0.68 6
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_3756 Type IV pilus biogenesis protein PilQ 0.24 Pf6N2E2_4124 Uncharacterized protein with LysM domain, COG1652 low > 103
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_09395 fimbrial protein 0.24 AO356_11290 peptidoglycan-binding protein low > 104
Pseudomonas stutzeri RCH2 0.32 Psest_3715 type IV pilus secretin (or competence protein) PilQ 0.24 Psest_0024 LysM domain. 0.64 21
Marinobacter adhaerens HP15 0.32 HP15_478 type 4 fimbrial biogenesis protein PilQ 0.25 HP15_3745 protein containing LysM domain low > 73
Pseudomonas sp. S08-1 0.32 OH686_10025 Type IV pilus biogenesis protein PilQ 0.23 OH686_12510 Uncharacterized protein with LysM domain low > 80
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS11855 type IV pilus secretin PilQ 0.20 LRK54_RS10140 LysM peptidoglycan-binding domain-containing protein 0.51 26
Rhodanobacter denitrificans MT42 0.31 LRK55_RS11580 type IV pilus secretin PilQ 0.20 LRK55_RS09780 LysM domain-containing protein low > 63
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_12040 pilQ type IV pilus secretin PilQ 0.19 OKGIIK_13775 xkdP peptidoglycan-binding protein low > 52
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS11790 type IV pilus secretin PilQ 0.18 ABZR86_RS13875 LysM domain-containing protein low > 74
Acinetobacter radioresistens SK82 0.30 MPMX26_02812 Type 3 secretion system secretin 0.19 MPMX26_00115 hypothetical protein 0.60 28
Shewanella loihica PV-4 0.29 Shew_0212 type IV pilus secretin PilQ (RefSeq) 0.17 Shew_3735 peptidoglycan-binding LysM (RefSeq) low > 60
Shewanella amazonensis SB2B 0.29 Sama_3369 type IV pilus biogenesis protein PilQ (RefSeq) 0.16 Sama_0044 LysM domain-containing protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.29 SO0285 type IV pilus biogenesis protein PilQ (NCBI ptt file) 0.16 SO0033 LysM domain protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.29 Shewana3_3895 type IV pilus secretin PilQ (RefSeq) 0.16 Shewana3_0036 peptidoglycan-binding LysM (RefSeq) 0.63 1

Not shown: 2 genomes with orthologs for ABZR87_RS02600 only; 3 genomes with orthologs for ABZR87_RS04980 only