Conservation of cofitness between ABZR87_RS04980 and ABZR87_RS02610 in Ralstonia sp. UNC404CL21Col

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS04980 LysM peptidoglycan-binding domain-containing protein 1.0 ABZR87_RS02610 type 4a pilus biogenesis protein PilO 0.96 12
Ralstonia solanacearum UW163 0.81 UW163_RS03820 LysM peptidoglycan-binding domain-containing protein 0.86 UW163_RS06660 pilus assembly protein PilO — —
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS09760 LysM peptidoglycan-binding domain-containing protein 0.86 RALBFv3_RS06955 pilus assembly protein PilO 0.72 9
Ralstonia solanacearum PSI07 0.80 RPSI07_RS23605 LysM peptidoglycan-binding domain-containing protein 0.88 RPSI07_RS10280 pilus assembly protein PilO 0.79 7
Ralstonia solanacearum GMI1000 0.79 RS_RS00345 LysM peptidoglycan-binding domain-containing protein 0.88 RS_RS14900 type IV pilus biogenesis protein PilO 0.48 10
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS20475 peptidoglycan-binding protein LysM 0.64 RR42_RS19025 pilus assembly protein PilO low > 128
Variovorax sp. SCN45 0.39 GFF5490 Uncharacterized protein with LysM domain, COG1652 0.44 GFF5321 Type IV pilus biogenesis protein PilO 0.99 10
Variovorax sp. OAS795 0.38 ABID97_RS01825 LysM peptidoglycan-binding domain-containing protein 0.42 ABID97_RS23275 type 4a pilus biogenesis protein PilO 0.98 10
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF2572 Uncharacterized protein with LysM domain, COG1652 0.40 GFF1335 Type IV pilus biogenesis protein PilO 0.64 21
Acidovorax sp. GW101-3H11 0.37 Ac3H11_4410 Uncharacterized protein with LysM domain, COG1652 0.40 Ac3H11_4702 Type IV pilus biogenesis protein PilO low > 79
Dechlorosoma suillum PS 0.30 Dsui_0818 LysM domain-containing protein 0.37 Dsui_1189 Tfp pilus assembly protein PilO low > 51
Marinobacter adhaerens HP15 0.25 HP15_3745 protein containing LysM domain 0.24 HP15_476 type 4 fimbrial biogenesis protein PilO — —
Pseudomonas stutzeri RCH2 0.24 Psest_0024 LysM domain. 0.23 Psest_3717 Tfp pilus assembly protein PilO 0.61 12
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_4124 Uncharacterized protein with LysM domain, COG1652 0.21 Pf6N2E2_3758 Type IV pilus biogenesis protein PilO low > 103
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_11290 peptidoglycan-binding protein 0.22 AO356_09405 pilus assembly protein PilP low > 104
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_10645 peptidoglycan-binding protein 0.23 AO353_12485 pilus assembly protein PilP low > 101
Pseudomonas sp. S08-1 0.23 OH686_12510 Uncharacterized protein with LysM domain 0.26 OH686_10040 Type IV pilus biogenesis protein PilO 0.82 58
Pseudomonas sp. RS175 0.23 PFR28_04660 hypothetical protein 0.22 PFR28_05009 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_1911 Uncharacterized protein with LysM domain, COG1652 0.22 Pf1N1B4_1541 Type IV pilus biogenesis protein PilO low > 87
Rhodanobacter denitrificans MT42 0.20 LRK55_RS09780 LysM domain-containing protein 0.30 LRK55_RS11570 type 4a pilus biogenesis protein PilO low > 63
Acinetobacter radioresistens SK82 0.19 MPMX26_00115 hypothetical protein 0.22 MPMX26_02814 hypothetical protein 0.53 17
Rhodanobacter sp. FW510-T8 0.19 OKGIIK_13775 xkdP peptidoglycan-binding protein 0.30 OKGIIK_12050 pilO fimbrial protein low > 52
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS13875 LysM domain-containing protein 0.30 ABZR86_RS11800 type 4a pilus biogenesis protein PilO 0.57 7
Shewanella loihica PV-4 0.17 Shew_3735 peptidoglycan-binding LysM (RefSeq) 0.22 Shew_0210 pilus assembly protein, PilO (RefSeq) low > 60
Lysobacter sp. OAE881 0.17 ABIE51_RS02240 LysM peptidoglycan-binding domain-containing protein 0.20 ABIE51_RS17175 type 4a pilus biogenesis protein PilO low > 62
Shewanella sp. ANA-3 0.16 Shewana3_0036 peptidoglycan-binding LysM (RefSeq) 0.22 Shewana3_3897 pilus assembly protein, PilO (RefSeq) low > 73
Shewanella amazonensis SB2B 0.16 Sama_0044 LysM domain-containing protein (RefSeq) 0.24 Sama_3371 type IV pilus biogenesis protein PilO (RefSeq) low > 62
Shewanella oneidensis MR-1 0.16 SO0033 LysM domain protein (NCBI ptt file) 0.21 SO0283 type IV pilus biogenesis protein PilO (NCBI ptt file) low > 76
Xanthomonas campestris pv. campestris strain 8004 0.15 Xcc-8004.4744.1 Uncharacterized protein with LysM domain, COG1652 0.27 Xcc-8004.1192.1 Type IV pilus biogenesis protein PilO low > 74
Alteromonas macleodii MIT1002 0.15 MIT1002_00021 LysM domain/BON superfamily protein 0.23 MIT1002_00451 Pilus assembly protein, PilO low > 70

Not shown: 4 genomes with orthologs for ABZR87_RS04980 only; 2 genomes with orthologs for ABZR87_RS02610 only