Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Shewanella amazonensis SB2B | 1.0 | Sama_2008 | | cystathionine beta-lyase (RefSeq) | 1.0 | Sama_3278 | | threonine dehydratase (RefSeq) | 0.82 | 17 |
Shewanella oneidensis MR-1 | 0.83 | SO2191 | metC | cystathionine beta-lyase (NCBI ptt file) | 0.78 | SO4344 | ilvA | threonine dehydratase (NCBI ptt file) | 0.89 | 47 |
Shewanella sp. ANA-3 | 0.82 | Shewana3_2414 | | cystathionine beta-lyase (RefSeq) | 0.77 | Shewana3_0359 | | threonine dehydratase (RefSeq) | 0.91 | 15 |
Shewanella loihica PV-4 | 0.82 | Shew_1789 | | cystathionine beta-lyase (RefSeq) | 0.75 | Shew_0293 | | threonine dehydratase (RefSeq) | 0.96 | 16 |
Vibrio cholerae E7946 ATCC 55056 | 0.65 | CSW01_08400 | | cystathionine beta-lyase | 0.57 | CSW01_00135 | | threonine ammonia-lyase, biosynthetic | low | > 62 |
Dickeya dadantii 3937 | 0.55 | DDA3937_RS01815 | | cystathionine beta-lyase | 0.58 | DDA3937_RS20150 | | threonine ammonia-lyase, biosynthetic | 0.88 | 20 |
Dickeya dianthicola 67-19 | 0.55 | HGI48_RS01710 | | cystathionine beta-lyase | 0.58 | HGI48_RS20290 | | threonine ammonia-lyase, biosynthetic | 0.78 | 21 |
Dickeya dianthicola ME23 | 0.55 | DZA65_RS01785 | | cystathionine beta-lyase | 0.56 | DZA65_RS21330 | | threonine ammonia-lyase, biosynthetic | 0.92 | 6 |
Pectobacterium carotovorum WPP14 | 0.54 | HER17_RS19690 | | cystathionine beta-lyase | 0.56 | HER17_RS01080 | | threonine ammonia-lyase, biosynthetic | 0.97 | 13 |
Serratia liquefaciens MT49 | 0.53 | IAI46_21725 | | cystathionine beta-lyase | 0.56 | IAI46_24340 | | threonine ammonia-lyase, biosynthetic | low | > 86 |
Rahnella sp. WP5 | 0.52 | EX31_RS08025 | | cystathionine beta-lyase | 0.56 | EX31_RS15010 | | threonine ammonia-lyase, biosynthetic | low | > 89 |
Escherichia fergusonii Becca | 0.52 | EFB2_00802 | | Cystathionine beta-lyase MetC | 0.56 | EFB2_04864 | | L-threonine dehydratase biosynthetic IlvA | low | > 86 |
Escherichia coli ECRC98 | 0.52 | JDDGAC_22595 | metC | cystathionine beta-lyase | 0.55 | JDDGAC_18255 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
Escherichia coli ECRC101 | 0.52 | OKFHMN_18960 | metC | cystathionine beta-lyase | 0.55 | OKFHMN_14635 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.52 | GFF3120 | | Cystathionine beta-lyase (EC 4.4.1.8) | 0.55 | GFF2900 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 78 |
Escherichia coli ECRC99 | 0.52 | KEDOAH_09185 | metC | cystathionine beta-lyase | 0.55 | KEDOAH_13515 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
Escherichia coli ECRC102 | 0.52 | NIAGMN_16725 | metC | cystathionine beta-lyase | 0.55 | NIAGMN_12390 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
Escherichia coli Nissle 1917 | 0.52 | ECOLIN_RS17315 | | cystathionine beta-lyase | 0.56 | ECOLIN_RS21670 | | threonine ammonia-lyase, biosynthetic | low | > 52 |
Escherichia coli ECRC101 | 0.52 | MCAODC_09475 | metC | cystathionine beta-lyase | 0.55 | MCAODC_05140 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
Escherichia coli BL21 | 0.52 | ECD_02881 | | cystathionine beta-lyase, PLP-dependent | 0.55 | ECD_03650 | | l-threonine dehydratase, biosynthetic; also known as threonine deaminase | low | > 60 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.52 | OHPLBJKB_00693 | | Cystathionine beta-lyase MetC | 0.55 | OHPLBJKB_04281 | | L-threonine dehydratase biosynthetic IlvA | low | > 73 |
Escherichia coli ECRC62 | 0.52 | BNILDI_00780 | metC | cystathionine beta-lyase | 0.55 | BNILDI_04755 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
Escherichia coli ECOR27 | 0.52 | NOLOHH_10735 | metC | cystathionine beta-lyase | 0.55 | NOLOHH_06770 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 57 |
Escherichia coli ECOR38 | 0.52 | HEPCGN_17825 | metC | cystathionine beta-lyase | 0.55 | HEPCGN_13345 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 85 |
Escherichia coli BW25113 | 0.51 | b3008 | metC | cystathionine beta-lyase (NCBI) | 0.55 | b3772 | ilvA | threonine dehydratase (NCBI) | 0.95 | 3 |
Klebsiella michiganensis M5al | 0.51 | BWI76_RS24285 | | cystathionine beta-lyase | 0.55 | BWI76_RS00980 | | PLP-dependent threonine dehydratase | 0.94 | 2 |
Enterobacter asburiae PDN3 | 0.51 | EX28DRAFT_3046 | | cystathionine beta-lyase, bacterial | 0.55 | EX28DRAFT_4444 | | threonine ammonia-lyase, biosynthetic, long form | 0.90 | 11 |
Enterobacter sp. TBS_079 | 0.50 | MPMX20_03852 | | Cystathionine beta-lyase MetC | 0.55 | MPMX20_04498 | | L-threonine dehydratase biosynthetic IlvA | 0.96 | 2 |
Erwinia tracheiphila SCR3 | 0.49 | LU632_RS20545 | metC | cystathionine beta-lyase | 0.56 | LU632_RS24395 | ilvA | threonine ammonia-lyase, biosynthetic | 0.87 | 13 |
Pantoea sp. MT58 | 0.47 | IAI47_03215 | | cystathionine beta-lyase | 0.56 | IAI47_01040 | | threonine ammonia-lyase, biosynthetic | low | > 76 |
Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_24330 | | cystathionine beta-lyase | 0.51 | AO353_08485 | | threonine dehydratase | low | > 101 |
Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS11250 | | cystathionine beta-lyase | 0.47 | ABZR87_RS07360 | | threonine ammonia-lyase, biosynthetic | 0.31 | 57 |
Variovorax sp. OAS795 | 0.43 | ABID97_RS22430 | | cystathionine beta-lyase | 0.47 | ABID97_RS07000 | | threonine ammonia-lyase, biosynthetic | low | > 91 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.43 | GFF5026 | | Cystathionine beta-lyase (EC 4.4.1.8) | 0.49 | GFF1379 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 90 |
Azospirillum sp. SherDot2 | 0.42 | MPMX19_01339 | | Cystathionine beta-lyase MetC | 0.49 | MPMX19_02807 | | L-threonine dehydratase biosynthetic IlvA | low | > 112 |
Variovorax sp. SCN45 | 0.41 | GFF1749 | | Cystathionine beta-lyase (EC 4.4.1.8) | 0.47 | GFF5246 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 127 |
Pseudomonas syringae pv. syringae B728a | 0.39 | Psyr_0607 | | cystathionine beta-lyase | 0.53 | Psyr_1672 | | L-threonine ammonia-lyase | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.39 | Psyr_0607 | | cystathionine beta-lyase | 0.53 | Psyr_1672 | | L-threonine ammonia-lyase | low | > 86 |
Ralstonia solanacearum PSI07 | 0.39 | RPSI07_RS02185 | | cystathionine beta-lyase | 0.48 | RPSI07_RS21810 | | threonine ammonia-lyase, biosynthetic | low | > 81 |
Ralstonia solanacearum IBSBF1503 | 0.38 | RALBFv3_RS20555 | | cystathionine beta-lyase | 0.46 | RALBFv3_RS11395 | | threonine ammonia-lyase, biosynthetic | low | > 76 |
Cupriavidus basilensis FW507-4G11 | 0.38 | RR42_RS30610 | | cystathionine beta-lyase | 0.47 | RR42_RS02315 | | threonine dehydratase | low | > 128 |
Ralstonia solanacearum UW163 | 0.38 | UW163_RS18620 | | cystathionine beta-lyase | 0.46 | UW163_RS02190 | | threonine ammonia-lyase, biosynthetic | — | — |
Paraburkholderia sabiae LMG 24235 | 0.38 | QEN71_RS22165 | | cystathionine beta-lyase | 0.48 | QEN71_RS01985 | | threonine ammonia-lyase, biosynthetic | low | > 153 |
Burkholderia phytofirmans PsJN | 0.36 | BPHYT_RS09190 | | cystathionine beta-lyase | 0.48 | BPHYT_RS11065 | | threonine dehydratase | — | — |
Castellaniella sp019104865 MT123 | 0.36 | ABCV34_RS12385 | | PLP-dependent aspartate aminotransferase family protein | 0.49 | ABCV34_RS14460 | | threonine ammonia-lyase, biosynthetic | low | > 48 |
Herbaspirillum seropedicae SmR1 | 0.35 | HSERO_RS14995 | | cystathionine beta-lyase | 0.47 | HSERO_RS19510 | | threonine dehydratase | low | > 78 |
Ralstonia solanacearum GMI1000 | 0.34 | RS_RS08260 | | cystathionine beta-lyase | 0.49 | RS_RS02225 | | threonine ammonia-lyase, biosynthetic | — | — |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.31 | A4249_RS05585 | | cystathionine beta-lyase | 0.48 | A4249_RS00615 | | threonine ammonia-lyase, biosynthetic | low | > 48 |
Acidovorax sp. GW101-3H11 | 0.26 | Ac3H11_4146 | | Cystathionine beta-lyase (EC 4.4.1.8) | 0.49 | Ac3H11_2042 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 79 |
Acinetobacter radioresistens SK82 | 0.24 | MPMX26_02724 | | Cystathionine beta-lyase | 0.47 | MPMX26_01278 | | L-threonine dehydratase biosynthetic IlvA | low | > 36 |
Not shown: 12 genomes with orthologs for Sama_2008 only; 19 genomes with orthologs for Sama_3278 only