Conservation of cofitness between Sama_1376 and Sama_3021 in Shewanella amazonensis SB2B

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_1376 methylmalonate-semialdehyde dehydrogenase (RefSeq) 1.0 Sama_3021 ubiquinol--cytochrome-c reductase (RefSeq) 0.45 16
Shewanella sp. ANA-3 0.89 Shewana3_2770 methylmalonate-semialdehyde dehydrogenase [acylating] (RefSeq) 0.81 Shewana3_0601 ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) — —
Shewanella oneidensis MR-1 0.88 SO1678 mmsA methylmalonate-semialdehyde dehydrogenase (NCBI ptt file) 0.81 SO0608 petA ubiquinol-cytochrome c reductase, iron-sulfur subunit (NCBI ptt file) — —
Shewanella loihica PV-4 0.88 Shew_1668 methylmalonate-semialdehyde dehydrogenase (RefSeq) 0.82 Shew_0570 ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) low > 60
Marinobacter adhaerens HP15 0.73 HP15_906 methylmalonate-semialdehyde dehydrogenase 0.57 HP15_545 ubiquinol-cytochrome c reductase iron-sulfur subunit — —
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_05990 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) (from data) 0.55 AO353_15245 ubiquinol-cytochrome c reductase iron-sulfur subunit — —
Pseudomonas sp. RS175 0.60 PFR28_00013 Methylmalonate-semialdehyde dehydrogenase [acylating] 0.56 PFR28_03606 Ubiquinol-cytochrome c reductase iron-sulfur subunit — —
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_1229 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) (from data) 0.56 Pf1N1B4_962 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) low > 87
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_07870 methylmalonate-semialdehyde dehydrogenase 0.56 AO356_17065 ubiquinol-cytochrome c reductase iron-sulfur subunit low > 104
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_3452 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) 0.56 Pf6N2E2_5337 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) low > 103
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS25540 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.58 PFLU_RS04195 ubiquinol-cytochrome c reductase iron-sulfur subunit low > 109
Pseudomonas simiae WCS417 0.58 PS417_23725 methylmalonate-semialdehyde dehydrogenase 0.58 PS417_04155 ubiquinol-cytochrome C reductase — —
Pseudomonas fluorescens SBW25 0.58 PFLU_RS25540 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.58 PFLU_RS04195 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.45 97
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS24025 methylmalonate-semialdehyde dehydrogenase 0.50 RR42_RS18825 ubiquinol-cytochrome C reductase — —
Pseudomonas putida KT2440 0.58 PP_4667 methylmalonate-semialdehyde dehydrogenase 0.55 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit low > 96
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS12395 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.44 QEN71_RS27785 ubiquinol-cytochrome c reductase iron-sulfur subunit low > 153
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_01202 methylmalonate-semialdehyde dehydrogenase [acylating] 0.45 H281DRAFT_05669 ubiquinol-cytochrome c reductase iron-sulfur subunit — —
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS17470 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.43 ABZR87_RS02385 ubiquinol-cytochrome c reductase iron-sulfur subunit low > 80
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS28030 methylmalonate-semialdehyde dehydrogenase 0.44 BPHYT_RS17630 ubiquinol-cytochrome C reductase low > 109
Ralstonia solanacearum GMI1000 0.56 RS_RS20230 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.44 RS_RS14675 ubiquinol-cytochrome c reductase iron-sulfur subunit low > 80
Variovorax sp. OAS795 0.56 ABID97_RS19425 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.49 ABID97_RS22985 ubiquinol-cytochrome c reductase iron-sulfur subunit low > 91
Variovorax sp. SCN45 0.56 GFF7377 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) 0.51 GFF6694 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) low > 127
Pseudomonas sp. S08-1 0.55 OH686_05865 methylmalonate-semialdehyde dehydrogenase (acylating) 0.55 OH686_08390 ubiquinol-cytochrome c reductase, iron-sulfur subunit — —
Ralstonia solanacearum IBSBF1503 0.55 RALBFv3_RS20410 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.44 RALBFv3_RS06730 ubiquinol-cytochrome c reductase iron-sulfur subunit — —
Ralstonia solanacearum UW163 0.55 UW163_RS18765 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.44 UW163_RS06885 ubiquinol-cytochrome c reductase iron-sulfur subunit — —
Ralstonia solanacearum PSI07 0.54 RPSI07_RS02330 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.43 RPSI07_RS10505 ubiquinol-cytochrome c reductase iron-sulfur subunit — —
Pseudomonas stutzeri RCH2 0.54 Psest_2436 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) (from data) 0.56 Psest_3279 ubiquinol-cytochrome c reductase, iron-sulfur subunit — —
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.3689.1 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) 0.58 Xcc-8004.2228.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) low > 74
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS15395 methylmalonate-semialdehyde dehydrogenase 0.44 HSERO_RS20245 ubiquinol-cytochrome C reductase — —
Castellaniella sp019104865 MT123 0.49 ABCV34_RS08280 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.47 ABCV34_RS12635 ubiquinol-cytochrome c reductase iron-sulfur subunit — —

Not shown: 6 genomes with orthologs for Sama_1376 only; 26 genomes with orthologs for Sama_3021 only