Conservation of cofitness between Sama_0429 and Sama_0403 in Shewanella amazonensis SB2B

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0429 predicted FeS cluster maintenance protein (from data) 1.0 Sama_0403 drug resistance transporter, EmrB/QacA family protein (RefSeq) 0.43 7
Shewanella sp. ANA-3 0.82 Shewana3_3701 hypothetical protein (RefSeq) 0.71 Shewana3_0523 EmrB/QacA family drug resistance transporter (RefSeq) low > 73
Shewanella oneidensis MR-1 0.81 SO4164 predicted FeS cluster maintenance protein (from data) 0.71 SO0525 drug resistance transporter, EmrB/QacA family protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.78 Shew_0373 hypothetical protein (RefSeq) 0.70 Shew_3405 EmrB/QacA family drug resistance transporter (RefSeq) low > 60
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS02395 hypothetical protein 0.33 RR42_RS27155 DSBA oxidoreductase low > 128
Pseudomonas sp. S08-1 0.48 OH686_10105 hypothetical protein 0.51 OH686_04570 Inner-membrane proton/drug antiporter (MSF type) of tripartite multidrug efflux system — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF1256 FIG028220: hypothetical protein co-occurring with HEAT repeat protein 0.24 GFF3757 Inner membrane component of tripartite multidrug resistance system low > 90
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_1554 predicted FeS cluster maintenance protein (from data) 0.31 Pf1N1B4_122 Inner membrane component of tripartite multidrug resistance system low > 87
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_12420 predicted FeS cluster maintenance protein (from data) 0.49 AO353_20550 disulfide bond formation protein DsbA low > 101
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS19490 hypothetical protein 0.28 HSERO_RS15980 DSBA oxidoreductase low > 78
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_291 FIG028220: hypothetical protein co-occurring with HEAT repeat protein 0.49 PfGW456L13_3958 Inner membrane component of tripartite multidrug resistance system — —
Dechlorosoma suillum PS 0.46 Dsui_0862 hypothetical protein 0.14 Dsui_1523 drug resistance transporter, EmrB/QacA subfamily low > 51
Acidovorax sp. GW101-3H11 0.46 Ac3H11_4793 FIG028220: hypothetical protein co-occurring with HEAT repeat protein 0.23 Ac3H11_2352 Inner membrane component of tripartite multidrug resistance system low > 79
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_0393 Protein of unknown function DUF971 0.24 Psyr_1731 Drug resistance transporter EmrB/QacA subfamily low > 86
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_0393 Protein of unknown function DUF971 0.24 Psyr_1731 Drug resistance transporter EmrB/QacA subfamily low > 86
Pseudomonas sp. RS175 0.45 PFR28_04997 hypothetical protein 0.25 PFR28_02747 Multidrug export protein EmrB — —
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_09465 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.25 AO356_01025 multidrug resistance protein B — —
Ralstonia solanacearum PSI07 0.45 RPSI07_RS21775 DUF971 domain-containing protein 0.27 RPSI07_RS11545 EmrB/QacA family drug resistance transporter low > 81
Ralstonia solanacearum UW163 0.45 UW163_RS02150 DUF971 domain-containing protein 0.25 UW163_RS07870 MFS transporter — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS11435 DUF971 domain-containing protein 0.26 RALBFv3_RS05755 EmrB/QacA family drug resistance transporter low > 76
Ralstonia solanacearum GMI1000 0.45 RS_RS02265 DUF971 domain-containing protein 0.27 RS_RS13645 EmrB/QacA family drug resistance transporter low > 80
Pseudomonas putida KT2440 0.45 PP_5002 conserved protein of unknown function 0.50 PP_1975 putative EmrB/QacA family drug resistance transporter — —
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_3771 FIG028220: hypothetical protein co-occurring with HEAT repeat protein 0.24 Pf6N2E2_149 Inner membrane component of tripartite multidrug resistance system — —
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS07395 DUF971 domain-containing protein 0.23 ABZR87_RS11225 DHA2 family efflux MFS transporter permease subunit low > 80
Variovorax sp. OAS795 0.44 ABID97_RS07250 DUF971 domain-containing protein 0.23 ABID97_RS20390 DHA2 family efflux MFS transporter permease subunit low > 91
Pseudomonas simiae WCS417 0.43 PS417_01910 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.25 PS417_16910 multidrug resistance protein B — —
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS01955 DUF971 domain-containing protein 0.25 PFLU_RS18895 DHA2 family efflux MFS transporter permease subunit low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS01955 DUF971 domain-containing protein 0.25 PFLU_RS18895 DHA2 family efflux MFS transporter permease subunit low > 109
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS03160 hypothetical protein 0.34 BPHYT_RS21945 DSBA oxidoreductase low > 109
Variovorax sp. SCN45 0.43 GFF2541 FIG00899427: hypothetical protein 0.25 GFF4771 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) low > 127
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_04612 DUF971 family protein 0.34 H281DRAFT_03096 drug resistance transporter, EmrB/QacA subfamily low > 103
Azospirillum sp. SherDot2 0.42 MPMX19_01909 hypothetical protein 0.30 MPMX19_04287 Colistin resistance protein EmrB low > 112
Paraburkholderia graminis OAS925 0.42 ABIE53_000770 DUF971 family protein 0.33 ABIE53_005460 DHA2 family multidrug resistance protein low > 113
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS02000 DUF971 domain-containing protein 0.34 QEN71_RS18310 DHA2 family efflux MFS transporter permease subunit low > 153
Agrobacterium fabrum C58 0.40 Atu1694 hypothetical protein 0.31 Atu4479 MFS permease low > 89
Rhizobium sp. OAE497 0.37 ABIE40_RS10580 DUF971 domain-containing protein 0.30 ABIE40_RS21120 DHA2 family efflux MFS transporter permease subunit low > 107

Not shown: 3 genomes with orthologs for Sama_0429 only; 47 genomes with orthologs for Sama_0403 only