Conservation of cofitness between Shew_3203 and Shew_3412 in Shewanella loihica PV-4

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_3203 hypothetical protein (RefSeq) 1.0 Shew_3412 purH bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (RefSeq) 0.43 7
Shewanella oneidensis MR-1 0.53 SO0855 conserved hypothetical protein (NCBI ptt file) 0.86 SO0442 purH phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI ptt file) 0.38 46
Shewanella sp. ANA-3 0.53 Shewana3_3423 hypothetical protein (RefSeq) 0.88 Shewana3_0441 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.42 Sama_2957 hypothetical protein (RefSeq) 0.87 Sama_0395 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (RefSeq) low > 62
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_5880 AttH component of AttEFGH ABC transport system 0.69 Pf1N1B4_1315 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) low > 87
Pseudomonas sp. RS175 0.33 PFR28_02764 hypothetical protein 0.68 PFR28_05214 Bifunctional purine biosynthesis protein PurH — —
Phaeobacter inhibens DSM 17395 0.32 PGA1_c16150 Predicted secreted hydrolase 0.48 PGA1_c32860 bifunctional purine biosynthesis protein PurH — —
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_01120 iron ABC transporter permease 0.69 AO356_08225 phosphoribosylaminoimidazolecarboxamide formyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_129 AttH component of AttEFGH ABC transport system 0.68 Pf6N2E2_3519 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) — —
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_21265 iron ABC transporter permease 0.69 AO353_13650 phosphoribosylaminoimidazolecarboxamide formyltransferase — —
Agrobacterium fabrum C58 0.31 Atu5134 hypothetical protein 0.45 Atu2823 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Pseudomonas simiae WCS417 0.31 PS417_17765 iron ABC transporter permease 0.69 PS417_02940 phosphoribosylaminoimidazolecarboxamide formyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_3745 conserved hypothetical protein 0.68 Psyr_4406 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_3745 conserved hypothetical protein 0.68 Psyr_4406 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase — —
Rhodopseudomonas palustris CGA009 0.30 TX73_025005 lipocalin-like domain-containing protein 0.49 TX73_000145 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS19540 iron ABC transporter permease 0.69 PFLU_RS03015 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH — —
Pseudomonas fluorescens SBW25 0.30 PFLU_RS19540 iron ABC transporter permease 0.69 PFLU_RS03015 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH low > 109
Marinobacter adhaerens HP15 0.28 HP15_4006 conserved hypothetical protein 0.69 HP15_3227 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Rhizobium sp. OAE497 0.28 ABIE40_RS27040 lipocalin-like domain-containing protein 0.45 ABIE40_RS19130 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 107
Dinoroseobacter shibae DFL-12 0.28 Dshi_3352 hypothetical protein (RefSeq) 0.49 Dshi_0358 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (RefSeq) — —
Pseudomonas putida KT2440 0.26 PP_3733 putative ABC transporter lipoprotein 0.68 PP_4822 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Alteromonas macleodii MIT1002 0.25 MIT1002_02827 putative secreted hydrolase 0.78 MIT1002_03959 Bifunctional purine biosynthesis protein PurH — —
Mycobacterium tuberculosis H37Rv 0.21 Rv0988 Possible conserved exported protein 0.38 Rv0957 Probable bifunctional purine biosynthesis protein PurH: phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR transformylase) (5'-phosphoribosyl-5-aminoimidazole-4-carboxamide formyltransferase) + inosinemonophosphate cyclohydrolase (imp cyclohydrolase) (inosinicase) (imp synthetase) (ATIC) — —
Vibrio cholerae E7946 ATCC 55056 0.20 CSW01_08185 hydroxyneurosporene synthase 0.81 CSW01_01420 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase low > 62
Variovorax sp. OAS795 0.17 ABID97_RS20360 carotenoid 1,2-hydratase 0.55 ABID97_RS24725 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.16 GFF3702 AttH component of AttEFGH ABC transport system 0.57 GFF636 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) — —
Variovorax sp. SCN45 0.16 GFF4781 AttH component of AttEFGH ABC transport system 0.55 GFF2146 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) — —
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS13300 carotenoid 1,2-hydratase 0.59 QEN71_RS26780 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 153
Acidovorax sp. GW101-3H11 0.16 Ac3H11_1430 AttH component of AttEFGH ABC transport system 0.56 Ac3H11_3994 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) — —
Paraburkholderia graminis OAS925 0.16 ABIE53_006176 putative secreted hydrolase 0.59 ABIE53_003491 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Burkholderia phytofirmans PsJN 0.16 BPHYT_RS24890 hydrolase 0.59 BPHYT_RS16595 bifunctional purine biosynthesis protein PurH — —
Paraburkholderia bryophila 376MFSha3.1 0.15 H281DRAFT_02439 Predicted secreted hydrolase 0.59 H281DRAFT_04251 IMP cyclohydrolase /phosphoribosylaminoimidazolecarboxamide formyltransferase — —

Not shown: 0 genomes with orthologs for Shew_3203 only; 69 genomes with orthologs for Shew_3412 only