Conservation of cofitness between Shew_2158 and Shew_0233 in Shewanella loihica PV-4

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2158 gamma-glutamyltransferase (RefSeq) 1.0 Shew_0233 hypothetical protein (RefSeq) 0.40 10
Shewanella oneidensis MR-1 0.78 SO1952 ggt-2 gamma-glutamyltranspeptidase (NCBI ptt file) 0.80 SO0311 hypothetical Fe-S oxidoreductase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.77 Shewana3_2487 gamma-glutamyltransferase 1 (RefSeq) 0.80 Shewana3_3874 hypothetical protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.72 Sama_1566 gamma-glutamyltransferase (RefSeq) 0.80 Sama_3349 hypothetical protein (RefSeq) low > 62
Rhodospirillum rubrum S1H 0.59 Rru_A0385 Gamma-glutamyltransferase (NCBI) 0.53 Rru_A2003 Radical SAM (NCBI) low > 58
Acidovorax sp. GW101-3H11 0.57 Ac3H11_1090 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.55 Ac3H11_4121 Fe-S OXIDOREDUCTASE (1.8.-.-) low > 79
Azospirillum sp. SherDot2 0.57 MPMX19_05752 Glutathione hydrolase proenzyme 0.54 MPMX19_06038 hypothetical protein low > 112
Enterobacter asburiae PDN3 0.56 EX28DRAFT_4279 gamma-glutamyltranspeptidase 0.66 EX28DRAFT_3051 uncharacterized radical SAM protein YgiQ low > 76
Klebsiella michiganensis M5al 0.56 BWI76_RS26275 gamma-glutamyltransferase 0.66 BWI76_RS24310 YgiQ family radical SAM protein low > 92
Escherichia coli BW25113 0.56 b3447 ggt gamma-glutamyltranspeptidase periplasmic precursor (NCBI) 0.66 b4469 ygiQ hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_00256 Glutathione hydrolase proenzyme 0.66 OHPLBJKB_00686 hypothetical protein low > 73
Escherichia coli ECOR27 0.56 NOLOHH_08590 ggt gamma-glutamyltransferase 0.66 NOLOHH_10695 ygiQ YgiQ family radical SAM protein low > 57
Escherichia coli ECRC62 0.56 BNILDI_02915 ggt gamma-glutamyltransferase 0.66 BNILDI_00820 ygiQ YgiQ family radical SAM protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF561 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.66 GFF3129 Probable Fe-S oxidoreductase family 2 low > 78
Escherichia fergusonii Becca 0.55 EFB2_00375 Glutathione hydrolase proenzyme 0.66 EFB2_00795 hypothetical protein low > 86
Escherichia coli BL21 0.55 ECD_03296 gamma-glutamyltranspeptidase 0.66 ECD_02888 Radical SAM superfamily protein low > 60
Escherichia coli ECRC99 0.55 KEDOAH_11340 ggt gamma-glutamyltransferase 0.66 KEDOAH_09230 ygiQ YgiQ family radical SAM protein — —
Escherichia coli ECRC102 0.55 NIAGMN_14570 ggt gamma-glutamyltransferase 0.66 NIAGMN_16680 ygiQ YgiQ family radical SAM protein — —
Escherichia coli ECRC98 0.55 JDDGAC_20430 ggt gamma-glutamyltransferase 0.66 JDDGAC_22550 ygiQ YgiQ family radical SAM protein — —
Escherichia coli ECRC101 0.55 OKFHMN_16800 ggt gamma-glutamyltransferase 0.66 OKFHMN_18915 ygiQ YgiQ family radical SAM protein — —
Escherichia coli ECOR38 0.55 HEPCGN_15620 ggt gamma-glutamyltransferase 0.66 HEPCGN_17785 ygiQ YgiQ family radical SAM protein low > 85
Escherichia coli Nissle 1917 0.55 ECOLIN_RS19715 gamma-glutamyltransferase 0.66 ECOLIN_RS17355 YgiQ family radical SAM protein low > 52
Enterobacter sp. TBS_079 0.55 MPMX20_04323 Glutathione hydrolase proenzyme 0.66 MPMX20_03857 hypothetical protein low > 85
Escherichia coli ECRC101 0.55 MCAODC_07330 ggt gamma-glutamyltransferase 0.66 MCAODC_09430 ygiQ YgiQ family radical SAM protein — —
Rhodopseudomonas palustris CGA009 0.49 TX73_000130 gamma-glutamyltransferase 0.54 TX73_003515 YgiQ family radical SAM protein low > 86
Variovorax sp. OAS795 0.44 ABID97_RS09895 gamma-glutamyltransferase 0.55 ABID97_RS14400 YgiQ family radical SAM protein low > 91
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_2671 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.58 PfGW456L13_137 Fe-S OXIDOREDUCTASE (1.8.-.-) low > 87
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS13685 gamma-glutamyltransferase 0.58 PFLU_RS02660 YgiQ family radical SAM protein low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS13685 gamma-glutamyltransferase 0.58 PFLU_RS02660 YgiQ family radical SAM protein low > 109
Pseudomonas sp. RS175 0.43 PFR28_02593 Glutathione hydrolase proenzyme 0.58 PFR28_05137 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_4081 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.58 Pf1N1B4_1396 Fe-S OXIDOREDUCTASE (1.8.-.-) low > 87
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_313 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.58 Pf6N2E2_3600 Fe-S OXIDOREDUCTASE (1.8.-.-) low > 103
Rahnella sp. WP5 0.43 EX31_RS22075 gamma-glutamyltransferase 0.66 EX31_RS04200 YgiQ family radical SAM protein low > 89
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_22255 gamma-glutamyltranspeptidase 0.58 AO356_08575 YgiQ family radical SAM protein low > 104
Variovorax sp. SCN45 0.43 GFF3077 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) 0.55 GFF1034 UPF0313 [4Fe-4S] protein YgiQ low > 127
Pseudomonas simiae WCS417 0.43 PS417_13045 gamma-glutamyltranspeptidase 0.58 PS417_02590 hypothetical protein low > 88
Serratia liquefaciens MT49 0.43 IAI46_04820 gamma-glutamyltransferase 0.65 IAI46_21835 YgiQ family radical SAM protein low > 86
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_0691 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 0.58 Psyr_0587 Radical SAM low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_0691 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 0.58 Psyr_0587 Radical SAM low > 86
Alteromonas macleodii MIT1002 0.37 MIT1002_00538 Gamma-glutamyltranspeptidase precursor 0.65 MIT1002_01793 ribosomal protein S12 methylthiotransferase low > 70
Pseudomonas putida KT2440 0.36 PP_4659 gamma-glutamyltranspeptidase 0.58 PP_4872 putative enzyme of unknown function low > 96
Pseudomonas stutzeri RCH2 0.34 Psest_1413 gamma-glutamyltranspeptidase 0.59 Psest_0701 uncharacterized radical SAM protein YgiQ low > 67
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_01035 gamma-glutamyltransferase 0.61 CSW01_08605 YgiQ family radical SAM protein low > 62
Pseudomonas sp. S08-1 0.24 OH686_14140 gamma-glutamyltransferase 0.60 OH686_15955 UPF0313 [4Fe-4S] protein YgiQ low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF3824 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.55 GFF4814 Fe-S OXIDOREDUCTASE (1.8.-.-) low > 90
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_14670 gamma-glutamyltransferase 0.58 AO353_13235 YgiQ family radical SAM protein low > 101
Dechlorosoma suillum PS 0.13 Dsui_0417 gamma-glutamyltransferase 0.57 Dsui_2420 uncharacterized radical SAM protein YgiQ low > 51

Not shown: 44 genomes with orthologs for Shew_2158 only; 4 genomes with orthologs for Shew_0233 only