Conservation of cofitness between Dshi_3824 and Dshi_2679 in Dinoroseobacter shibae DFL-12

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dinoroseobacter shibae DFL-12 1.0 Dshi_3824 phenylacetate-CoA ligase (RefSeq) 1.0 Dshi_2679 protein of unknown function DUF214 (RefSeq) 0.61 17
Phaeobacter inhibens DSM 17395 0.83 PGA1_c26800 phenylacetate-CoA ligase PaaK 0.58 PGA1_c26390 ABC transporter, permease protein 0.55 5
Herbaspirillum seropedicae SmR1 0.67 HSERO_RS20655 phenylacetate-CoA ligase 0.10 HSERO_RS09380 ABC transporter permease low > 78
Rhodopseudomonas palustris CGA009 0.65 TX73_008865 phenylacetate--CoA ligase 0.34 TX73_001020 ABC transporter permease low > 86
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS27520 phenylacetate--CoA ligase PaaK 0.12 QEN71_RS24320 ABC transporter permease low > 153
Paraburkholderia graminis OAS925 0.64 ABIE53_003634 phenylacetate-CoA ligase 0.12 ABIE53_001560 putative ABC transport system permease protein low > 113
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS17360 phenylacetate-CoA ligase 0.12 BPHYT_RS06480 ABC transporter permease low > 109
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_05720 phenylacetate-CoA ligase 0.11 H281DRAFT_04537 putative ABC transport system permease protein low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF622 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) 0.12 GFF1178 ABC transporter, permease protein, putative low > 90
Pseudomonas putida KT2440 0.63 PP_3279 phenylacetate-CoA ligase 0.07 PP_2316 putative ABC transporter, permease protein low > 96
Variovorax sp. SCN45 0.63 GFF6091 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) 0.11 GFF5663 ABC transporter, fused permease protein low > 127
Acinetobacter radioresistens SK82 0.63 MPMX26_01554 Phenylacetate-coenzyme A ligase 0.08 MPMX26_02338 hypothetical protein — —
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_2428 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) PaaF 0.12 PfGW456L13_2217 FIG00809136: hypothetical protein low > 87
Ralstonia solanacearum UW163 0.63 UW163_RS07170 phenylacetate--CoA ligase 0.14 UW163_RS10605 ABC transporter permease — —
Dechlorosoma suillum PS 0.63 Dsui_1441 phenylacetate-CoA ligase 0.12 Dsui_2415 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component low > 51
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS06455 phenylacetate--CoA ligase 0.14 RALBFv3_RS03120 ABC transporter permease low > 76
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS23755 phenylacetate--CoA ligase 0.10 RR42_RS05370 ABC transporter permease low > 128
Marinobacter adhaerens HP15 0.62 HP15_2696 phenylacetate-CoA ligase 0.15 HP15_1418 membrane protein containing DUF214, permase predicted low > 73
Enterobacter sp. TBS_079 0.62 MPMX20_02152 Phenylacetate-coenzyme A ligase 0.10 MPMX20_01094 hypothetical protein low > 85
Azospirillum sp. SherDot2 0.62 MPMX19_05780 Phenylacetate-coenzyme A ligase 0.32 MPMX19_02590 hypothetical protein low > 112
Klebsiella michiganensis M5al 0.62 BWI76_RS13140 phenylacetate-CoA ligase 0.09 BWI76_RS06955 sugar ABC transporter permease low > 92
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS02110 phenylacetate--CoA ligase PaaK 0.12 ABZR87_RS15020 ABC transporter permease low > 80
Ralstonia solanacearum PSI07 0.62 RPSI07_RS10785 phenylacetate--CoA ligase 0.13 RPSI07_RS14190 ABC transporter permease low > 81
Ralstonia solanacearum GMI1000 0.62 RS_RS14400 phenylacetate--CoA ligase 0.13 RS_RS10490 ABC transporter permease low > 80
Variovorax sp. OAS795 0.62 ABID97_RS22780 phenylacetate--CoA ligase PaaK 0.11 ABID97_RS07595 FtsX-like permease family protein low > 91
Enterobacter asburiae PDN3 0.61 EX28DRAFT_1410 phenylacetate-CoA ligase (EC 6.2.1.30) 0.10 EX28DRAFT_2463 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component low > 76
Escherichia coli BW25113 0.61 b1398 paaK phenylacetyl-CoA ligase (NCBI) 0.09 b0496 ybbP predicted inner membrane protein (NCBI) — —
Escherichia coli ECRC62 0.61 BNILDI_17895 paaF phenylacetate--CoA ligase 0.09 BNILDI_22375 ybbP Uncharacterized ABC transporter permease YbbP — —
Serratia liquefaciens MT49 0.61 IAI46_16400 phenylacetate--CoA ligase 0.09 IAI46_05355 ABC transporter permease low > 86
Escherichia coli ECOR27 0.61 NOLOHH_19440 paaF phenylacetate--CoA ligase 0.09 NOLOHH_00955 ybbP Uncharacterized ABC transporter permease YbbP — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_02313 Phenylacetate-coenzyme A ligase 0.09 OHPLBJKB_03178 hypothetical protein low > 73
Desulfovibrio vulgaris Miyazaki F 0.52 DvMF_0442 Phenylacetate--CoA ligase (RefSeq) 0.28 DvMF_2222 protein of unknown function DUF214 (RefSeq) low > 51
Rhodospirillum rubrum S1H 0.51 Rru_A1976 Phenylacetate--CoA ligase (NCBI) 0.29 Rru_A3653 Protein of unknown function DUF214 (NCBI) low > 58
Pseudomonas fluorescens SBW25-INTG 0.09 PFLU_RS06820 phenylacetate--CoA ligase family protein 0.07 PFLU_RS08345 ABC transporter permease low > 109
Pseudomonas fluorescens SBW25 0.09 PFLU_RS06820 phenylacetate--CoA ligase family protein 0.07 PFLU_RS08345 ABC transporter permease low > 109
Pseudomonas fluorescens FW300-N2E2 0.09 Pf6N2E2_1716 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) 0.11 Pf6N2E2_2478 FIG00809136: hypothetical protein low > 103
Pantoea sp. MT58 0.08 IAI47_20825 phenylacetate--CoA ligase family protein 0.06 IAI47_14360 ABC transporter permease low > 76

Not shown: 11 genomes with orthologs for Dshi_3824 only; 51 genomes with orthologs for Dshi_2679 only