Conservation of cofitness between Dshi_3824 and Dshi_0381 in Dinoroseobacter shibae DFL-12

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dinoroseobacter shibae DFL-12 1.0 Dshi_3824 phenylacetate-CoA ligase (RefSeq) 1.0 Dshi_0381 ABC transporter related (RefSeq) 0.62 13
Phaeobacter inhibens DSM 17395 0.83 PGA1_c26800 phenylacetate-CoA ligase PaaK 0.88 PGA1_c32560 high-affinity branched-chain amino acid transport ATP-binding protein low > 62
Herbaspirillum seropedicae SmR1 0.67 HSERO_RS20655 phenylacetate-CoA ligase 0.73 HSERO_RS12810 branched-chain amino acid ABC transporter ATP-binding protein low > 78
Rhodopseudomonas palustris CGA009 0.65 TX73_008865 phenylacetate--CoA ligase 0.57 TX73_020960 ABC transporter ATP-binding protein low > 86
Magnetospirillum magneticum AMB-1 0.65 AMB_RS13855 phenylacetate--CoA ligase 0.59 AMB_RS18185 ABC transporter ATP-binding protein low > 64
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS27520 phenylacetate--CoA ligase PaaK 0.37 QEN71_RS03120 ABC transporter ATP-binding protein low > 153
Paraburkholderia graminis OAS925 0.64 ABIE53_003634 phenylacetate-CoA ligase 0.37 ABIE53_003282 branched-chain amino acid transport system ATP-binding protein low > 113
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS17360 phenylacetate-CoA ligase 0.38 BPHYT_RS04430 amino acid ABC transporter ATPase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_05720 phenylacetate-CoA ligase 0.37 H281DRAFT_04059 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF622 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) 0.74 GFF2905 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) low > 90
Pseudomonas putida KT2440 0.63 PP_3279 phenylacetate-CoA ligase 0.52 PP_2753 putative Branched-chain amino acid ABC transporter, ATP-binding protein low > 96
Variovorax sp. SCN45 0.63 GFF6091 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) 0.75 GFF5618 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) low > 127
Ralstonia solanacearum UW163 0.63 UW163_RS07170 phenylacetate--CoA ligase 0.40 UW163_RS16435 ABC transporter ATP-binding protein — —
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS06455 phenylacetate--CoA ligase 0.40 RALBFv3_RS23185 ABC transporter ATP-binding protein low > 76
Dechlorosoma suillum PS 0.63 Dsui_1441 phenylacetate-CoA ligase 0.76 Dsui_1113 ABC-type branched-chain amino acid transport systems, ATPase component low > 51
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS23755 phenylacetate--CoA ligase 0.74 RR42_RS01650 branched-chain amino acid ABC transporter ATP-binding protein low > 128
Marinobacter adhaerens HP15 0.62 HP15_2696 phenylacetate-CoA ligase 0.57 HP15_4099 branched-chain amino acid ABC transporter, ATP-binding protein low > 73
Klebsiella michiganensis M5al 0.62 BWI76_RS13140 phenylacetate-CoA ligase 0.35 BWI76_RS05975 ABC transporter ATP-binding protein low > 92
Azospirillum sp. SherDot2 0.62 MPMX19_05780 Phenylacetate-coenzyme A ligase 0.58 MPMX19_03956 High-affinity branched-chain amino acid transport ATP-binding protein LivF low > 112
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS02110 phenylacetate--CoA ligase PaaK 0.47 ABZR87_RS21170 ABC transporter ATP-binding protein low > 80
Ralstonia solanacearum PSI07 0.62 RPSI07_RS10785 phenylacetate--CoA ligase 0.41 RPSI07_RS00085 ABC transporter ATP-binding protein low > 81
Ralstonia solanacearum GMI1000 0.62 RS_RS14400 phenylacetate--CoA ligase 0.41 RS_RS17280 ABC transporter ATP-binding protein low > 80
Variovorax sp. OAS795 0.62 ABID97_RS22780 phenylacetate--CoA ligase PaaK 0.75 ABID97_RS01100 ABC transporter ATP-binding protein low > 91
Serratia liquefaciens MT49 0.61 IAI46_16400 phenylacetate--CoA ligase 0.35 IAI46_13100 ABC transporter ATP-binding protein low > 86
Castellaniella sp019104865 MT123 0.60 ABCV34_RS13705 phenylacetate--CoA ligase PaaK 0.75 ABCV34_RS14180 ABC transporter ATP-binding protein low > 48
Desulfovibrio vulgaris Miyazaki F 0.52 DvMF_0442 Phenylacetate--CoA ligase (RefSeq) 0.37 DvMF_1162 ABC transporter related (RefSeq) low > 51
Rhodospirillum rubrum S1H 0.51 Rru_A1976 Phenylacetate--CoA ligase (NCBI) 0.59 Rru_A3505 ABC transporter component (NCBI) low > 58
Desulfovibrio vulgaris Hildenborough JW710 0.50 DVU1615 paaK-2 phenylacetate-coenzyme A ligase (TIGR) 0.37 DVU2740 livF high-affinity branched-chain amino acid ABC transporter, ATP-binding protein (TIGR) low > 55
Pseudomonas fluorescens SBW25 0.09 PFLU_RS06820 phenylacetate--CoA ligase family protein 0.53 PFLU_RS18785 ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.09 PFLU_RS06820 phenylacetate--CoA ligase family protein 0.53 PFLU_RS18785 ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.09 Pf6N2E2_1716 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) 0.56 Pf6N2E2_1429 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) low > 103

Not shown: 17 genomes with orthologs for Dshi_3824 only; 14 genomes with orthologs for Dshi_0381 only