Conservation of cofitness between SO2342 and SO2643 in Shewanella oneidensis MR-1

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2342 nadA quinolinate synthetase complex, subunit A (NCBI ptt file) 1.0 SO2643 oxidoreductase, FAD-binding, putative (NCBI ptt file) 0.53 7
Shewanella sp. ANA-3 0.98 Shewana3_2128 quinolinate synthetase (RefSeq) 0.95 Shewana3_1737 FAD linked oxidase domain-containing protein (RefSeq)
Shewanella amazonensis SB2B 0.88 Sama_1712 quinolinate synthetase (RefSeq) 0.79 Sama_2071 oxidoreductase, FAD-binding, putative (RefSeq)
Shewanella loihica PV-4 0.87 Shew_1928 quinolinate synthetase (RefSeq) 0.79 Shew_1550 FAD linked oxidase domain-containing protein (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.78 CSW01_09180 quinolinate synthase 0.60 CSW01_06060 FAD-binding oxidoreductase low > 62
Pectobacterium carotovorum WPP14 0.75 HER17_RS14820 quinolinate synthase NadA 0.60 HER17_RS08905 FAD-binding oxidoreductase low > 75
Serratia liquefaciens MT49 0.74 IAI46_06380 quinolinate synthase NadA 0.59 IAI46_11130 FAD-binding oxidoreductase low > 86
Enterobacter asburiae PDN3 0.74 EX28DRAFT_2245 quinolinate synthetase (EC 2.5.1.72) 0.59 EX28DRAFT_1696 FAD/FMN-containing dehydrogenases low > 76
Escherichia coli Nissle 1917 0.73 ECOLIN_RS03990 quinolinate synthase NadA 0.58 ECOLIN_RS09430 FAD-binding and (Fe-S)-binding domain-containing protein low > 55
Escherichia fergusonii Becca 0.73 EFB2_03356 Quinolinate synthase A 0.58 EFB2_02305 hypothetical protein low > 86
Enterobacter sp. TBS_079 0.73 MPMX20_01377 Quinolinate synthase A 0.59 MPMX20_01926 hypothetical protein low > 85
Dickeya dianthicola 67-19 0.73 HGI48_RS06595 quinolinate synthase NadA 0.60 HGI48_RS12860 FAD-binding oxidoreductase 0.72 70
Dickeya dianthicola ME23 0.73 DZA65_RS06945 quinolinate synthase NadA 0.59 DZA65_RS13325 FAD-binding oxidoreductase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF4 Quinolinate synthetase (EC 2.5.1.72) 0.57 GFF3554 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Escherichia coli BW25113 0.73 b0750 nadA quinolinate synthetase (NCBI) 0.59 b1687 ydiJ predicted FAD-linked oxidoreductase (NCBI) low > 76
Pantoea sp. MT58 0.73 IAI47_13635 quinolinate synthase NadA 0.59 IAI47_10890 FAD-binding oxidoreductase low > 76
Escherichia coli ECOR38 0.73 HEPCGN_01515 nadA quinolinate synthase NadA 0.58 HEPCGN_05615 ydiJ Uncharacterized protein YdiJ low > 88
Escherichia coli BL21 0.73 ECD_00703 quinolinate synthase, subunit A 0.59 ECD_01656 putative FAD-linked oxidoreductase low > 61
Dickeya dadantii 3937 0.73 DDA3937_RS06545 quinolinate synthase NadA 0.60 DDA3937_RS12795 FAD-binding oxidoreductase low > 74
Pantoea agglomerans CFBP13505 P0401 0.73 PagCFBP13505_RS03665 quinolinate synthase NadA 0.58 PagCFBP13505_RS17700 FAD-binding oxidoreductase low > 74
Escherichia coli ECRC62 0.73 BNILDI_21185 nadA quinolinate synthase NadA 0.59 BNILDI_16540 ydiJ Uncharacterized protein YdiJ low > 75
Escherichia coli ECOR27 0.73 NOLOHH_23190 nadA quinolinate synthase NadA 0.58 NOLOHH_17750 ydiJ Uncharacterized protein YdiJ low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_02963 Quinolinate synthase A 0.59 OHPLBJKB_02037 hypothetical protein low > 74
Escherichia coli ECRC102 0.73 NIAGMN_04810 nadA quinolinate synthase NadA 0.59 NIAGMN_00835 ydiJ Uncharacterized protein YdiJ low > 80
Escherichia coli ECRC100 0.73 OKFHMN_06760 nadA quinolinate synthase NadA 0.59 OKFHMN_27230 ydiJ Uncharacterized protein YdiJ low > 79
Escherichia coli ECRC98 0.73 JDDGAC_10415 nadA quinolinate synthase NadA 0.59 JDDGAC_01805 ydiJ Uncharacterized protein YdiJ low > 87
Escherichia coli ECRC101 0.73 MCAODC_25980 nadA quinolinate synthase NadA 0.59 MCAODC_18180 ydiJ Uncharacterized protein YdiJ low > 88
Escherichia coli ECRC99 0.73 KEDOAH_21205 nadA quinolinate synthase NadA 0.59 KEDOAH_00880 ydiJ Uncharacterized protein YdiJ
Klebsiella michiganensis M5al 0.72 BWI76_RS08580 quinolinate synthetase 0.59 BWI76_RS17050 FAD-binding oxidoreductase low > 92
Klebsiella pneumoniae MKP103 0.71 KDGMDA_16840 quinolinate synthase NadA 0.58 KDGMDA_24270 Uncharacterized protein YdiJ low > 95
Rahnella sp. WP5 0.71 EX31_RS23525 quinolinate synthase NadA 0.60 EX31_RS13925 FAD-binding oxidoreductase low > 89
Pseudomonas putida KT2440 0.68 PP_1231 quinolinate synthase [4Fe-4S] cluster subunit 0.43 PP_4493 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) low > 96
Pseudomonas sp. BP01 0.68 JOY50_RS01740 nadA quinolinate synthase NadA 0.43 JOY50_RS01040 FAD-binding and (Fe-S)-binding domain-containing protein low > 84
Pseudomonas sp. RS175 0.67 PFR28_03388 Quinolinate synthase A 0.44 PFR28_01530 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_18145 quinolinate synthase A 0.43 AO356_29050 hypothetical protein low > 104
Pseudomonas sp. DMC3 0.67 GFF5174 Quinolinate synthase A 0.44 GFF1760 putative protein low > 89
Pseudomonas sp. SVBP6 0.67 COO64_RS20215 nadA quinolinate synthase NadA 0.43 COO64_RS15335 FAD-binding and (Fe-S)-binding domain-containing protein low > 93
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_626 Quinolinate synthetase (EC 2.5.1.72) 0.41 Pf1N1B4_4229 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_1542 quinolinate synthetase 0.43 Psyr_2533 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_1542 quinolinate synthetase 0.43 Psyr_2533 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal low > 86
Paraburkholderia graminis OAS925 0.63 ABIE53_003294 quinolinate synthase 0.18 ABIE53_004693 FAD/FMN-containing dehydrogenase/Fe-S oxidoreductase low > 113
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS15650 quinolinate synthetase 0.18 BPHYT_RS34425 lactate dehydrogenase low > 109
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS17020 quinolinate synthetase 0.17 RR42_RS30390 lactate dehydrogenase low > 128
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS03060 quinolinate synthase NadA 0.17 QEN71_RS40185 FAD-binding and (Fe-S)-binding domain-containing protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_04071 quinolinate synthetase 0.18 H281DRAFT_03563 FAD/FMN-containing dehydrogenase low > 103
Variovorax sp. OAS795 0.59 ABID97_RS07415 quinolinate synthase NadA 0.16 ABID97_RS15850 FAD-linked oxidase C-terminal domain-containing protein low > 91
Erwinia tracheiphila HP pepo 2.2 0.59 IJEDHG_02045 nadA quinolinate synthase NadA 0.57 IJEDHG_25315 Uncharacterized protein YdiJ low > 61
Variovorax sp. SCN45 0.58 GFF2575 Quinolinate synthetase (EC 2.5.1.72) 0.16 GFF1371 Fe-S protein, homolog of lactate dehydrogenase SO1521 low > 127
Rhizobium sp. OAE497 0.23 ABIE40_RS23255 quinolinate synthase NadA 0.43 ABIE40_RS21040 FAD-binding and (Fe-S)-binding domain-containing protein low > 107
Rhodospirillum rubrum S1H 0.20 Rru_A1434 Quinolinate synthetase A (NCBI) 0.31 Rru_A2060 FAD linked oxidase (NCBI) low > 58

Not shown: 56 genomes with orthologs for SO2342 only; 5 genomes with orthologs for SO2643 only