Conservation of cofitness between SO2865 and SO1011 in Shewanella oneidensis MR-1

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2865 L-lysine exporter, putative (NCBI ptt file) 1.0 SO1011 nuoL NADH dehydrogenase I, L subunit (NCBI ptt file) 0.31 15
Acinetobacter baumannii LAC-4 0.46 RR41_RS09260 LysE/ArgO family amino acid transporter 0.53 RR41_RS15460 NADH-quinone oxidoreductase subunit L
Rhodospirillum rubrum S1H 0.44 Rru_A0657 Lysine exporter protein (LYSE/YGGA) (NCBI) 0.30 Rru_A1566 NADH-plastoquinone oxidoreductase, chain 5 (NCBI)
Rhizobium sp. OAE497 0.43 ABIE40_RS06180 LysE/ArgO family amino acid transporter 0.28 ABIE40_RS07240 NADH-quinone oxidoreductase subunit L
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1780 Transporter, LysE family 0.72 PfGW456L13_2623 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) low > 87
Pseudomonas sp. DMC3 0.41 GFF5061 Arginine exporter protein ArgO 0.72 GFF1502 NADH-quinone oxidoreductase subunit L low > 89
Agrobacterium fabrum C58 0.41 Atu0927 LysE family transporter 0.28 Atu1281 NADH ubiquinone oxidoreductase chain L
Pseudomonas sp. BP01 0.41 JOY50_RS14220 LysE/ArgO family amino acid transporter 0.72 JOY50_RS07015 nuoL NADH-quinone oxidoreductase subunit L low > 84
Pseudomonas putida KT2440 0.41 PP_0916 Amino acid transporter LysE 0.73 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L low > 96
Pseudomonas simiae WCS417 0.41 PS417_22175 amino acid transporter LysE 0.72 PS417_16625 NADH-quinone oxidoreductase subunit L
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_710 Transporter, LysE family 0.71 Pf1N1B4_4030 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) low > 87
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS02800 amino acid transporter 0.30 RALBFv3_RS02920 NADH-quinone oxidoreductase subunit L
Ralstonia solanacearum UW163 0.41 UW163_RS10925 amino acid transporter 0.30 UW163_RS10805 NADH-quinone oxidoreductase subunit L
Pseudomonas orientalis W4I3 0.40 QF045_RS24310 LysE/ArgO family amino acid transporter 0.72 QF045_RS18390 NADH-quinone oxidoreductase subunit L low > 93
Pseudomonas sp. RS175 0.40 PFR28_00607 Arginine exporter protein ArgO 0.75 PFR28_02637 NADH-quinone oxidoreductase subunit L
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_03925 lysine transporter LysE 0.74 AO353_27790 NADH-quinone oxidoreductase subunit L
Pseudomonas fluorescens SBW25 0.40 PFLU_RS23800 amino acid transporter 0.72 PFLU_RS18665 NADH-quinone oxidoreductase subunit L low > 109
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS23800 amino acid transporter 0.72 PFLU_RS18665 NADH-quinone oxidoreductase subunit L low > 109
Pseudomonas sp. SVBP6 0.39 COO64_RS12095 LysE/ArgO family amino acid transporter 0.69 COO64_RS24320 nuoL NADH-quinone oxidoreductase subunit L low > 93
Acinetobacter radioresistens SK82 0.39 MPMX26_00290 Arginine exporter protein ArgO 0.55 MPMX26_02545 NADH-quinone oxidoreductase subunit L
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_05000 lysine transporter LysE 0.72 AO356_22020 NADH-quinone oxidoreductase subunit L
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_2850 Transporter, LysE family 0.72 Pf6N2E2_267 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_4058 Lysine exporter protein (LYSE/YGGA) 0.72 Psyr_3207 NADH dehydrogenase subunit L
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_4058 Lysine exporter protein (LYSE/YGGA) 0.72 Psyr_3207 NADH dehydrogenase subunit L
Pseudomonas segetis P6 0.38 MPMX49_03760 Arginine exporter protein ArgO 0.73 MPMX49_02570 NADH-quinone oxidoreductase subunit L low > 75
Variovorax sp. SCN45 0.37 GFF2319 Arginine exporter protein ArgO 0.29 GFF4761 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Dinoroseobacter shibae DFL-12 0.37 Dshi_0712 Lysine exporter protein (LYSE/YGGA) (RefSeq) 0.28 Dshi_1327 proton-translocating NADH-quinone oxidoreductase, chain L (RefSeq)
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2969 L-lysine exporter 0.69 EX28DRAFT_0332 proton-translocating NADH-quinone oxidoreductase, chain L low > 76
Enterobacter sp. TBS_079 0.36 MPMX20_03775 Arginine exporter protein ArgO 0.69 MPMX20_03208 NADH-quinone oxidoreductase subunit L low > 85
Klebsiella michiganensis M5al 0.35 BWI76_RS23965 arginine exporter protein 0.68 BWI76_RS20140 NADH-quinone oxidoreductase subunit L low > 92
Rahnella sp. WP5 0.35 EX31_RS21440 arginine exporter ArgO 0.69 EX31_RS19385 NADH-quinone oxidoreductase subunit L low > 89
Pseudomonas sp. S08-1 0.35 OH686_07205 Arginine exporter protein ArgO 0.68 OH686_00105 NADH-ubiquinone oxidoreductase chain L low > 80
Klebsiella pneumoniae MKP103 0.35 KDGMDA_04440 arginine exporter ArgO 0.67 KDGMDA_27020 NADH-quinone oxidoreductase subunit L low > 95
Pectobacterium carotovorum WPP14 0.35 HER17_RS02705 arginine exporter ArgO 0.70 HER17_RS07175 NADH-quinone oxidoreductase subunit L low > 75
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS31460 amino acid transporter 0.30 RR42_RS05565 NADH:ubiquinone oxidoreductase subunit L
Escherichia fergusonii Becca 0.34 EFB2_00983 Arginine exporter protein ArgO 0.69 EFB2_01581 NADH-quinone oxidoreductase subunit L low > 86
Escherichia coli Nissle 1917 0.34 ECOLIN_RS16245 arginine exporter ArgO 0.69 ECOLIN_RS13235 NADH-quinone oxidoreductase subunit L low > 55
Acidovorax sp. GW101-3H11 0.34 Ac3H11_3377 Transporter, LysE family 0.29 Ac3H11_1441 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Escherichia coli ECOR27 0.34 NOLOHH_11320 argO arginine exporter ArgO 0.69 NOLOHH_14510 nuoL NADH-quinone oxidoreductase subunit L low > 76
Escherichia coli ECOR38 0.34 HEPCGN_18715 argO arginine exporter ArgO 0.69 HEPCGN_22095 nuoL NADH-quinone oxidoreductase subunit L 0.34 38
Escherichia coli ECRC102 0.34 NIAGMN_17175 argO arginine exporter ArgO 0.69 NIAGMN_20660 nuoL NADH-quinone oxidoreductase subunit L low > 80
Escherichia coli ECRC99 0.34 KEDOAH_08730 argO arginine exporter ArgO 0.69 KEDOAH_05305 nuoL NADH-quinone oxidoreductase subunit L
Escherichia coli ECRC101 0.34 MCAODC_09930 argO arginine exporter ArgO 0.69 MCAODC_13930 nuoL NADH-quinone oxidoreductase subunit L low > 87
Escherichia coli ECRC100 0.34 OKFHMN_19410 argO arginine exporter ArgO 0.69 OKFHMN_22890 nuoL NADH-quinone oxidoreductase subunit L low > 79
Escherichia coli ECRC98 0.34 JDDGAC_23040 argO arginine exporter ArgO 0.69 JDDGAC_26855 nuoL NADH-quinone oxidoreductase subunit L low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3018 Arginine exporter protein ArgO 0.70 GFF1881 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) low > 78
Escherichia coli ECRC62 0.33 BNILDI_09855 argO arginine exporter ArgO 0.69 BNILDI_13430 nuoL NADH-quinone oxidoreductase subunit L low > 75
Escherichia coli BW25113 0.33 b2923 argO arginine exporter protein (NCBI) 0.69 b2278 nuoL NADH dehydrogenase subunit L (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_00793 Arginine exporter protein ArgO 0.69 OHPLBJKB_01428 NADH-quinone oxidoreductase subunit L low > 74
Pantoea sp. MT58 0.33 IAI47_03705 arginine exporter ArgO 0.69 IAI47_06410 NADH-quinone oxidoreductase subunit L low > 76
Serratia liquefaciens MT49 0.33 IAI46_20920 arginine exporter ArgO 0.69 IAI46_17660 NADH-quinone oxidoreductase subunit L low > 87
Escherichia coli BL21 0.33 ECD_02754 arginine transporter 0.69 ECD_02203 NADH:ubiquinone oxidoreductase, membrane subunit L low > 61
Pantoea agglomerans CFBP13505 P0401 0.33 PagCFBP13505_RS15995 arginine exporter ArgO 0.69 PagCFBP13505_RS00385 NADH-quinone oxidoreductase subunit L low > 74
Dickeya dianthicola ME23 0.32 DZA65_RS02210 amino acid transporter 0.67 DZA65_RS14935 NADH-quinone oxidoreductase subunit L
Dickeya dianthicola 67-19 0.31 HGI48_RS02085 amino acid transporter 0.67 HGI48_RS14260 NADH-quinone oxidoreductase subunit L low > 71
Dickeya dadantii 3937 0.31 DDA3937_RS02115 amino acid transporter 0.67 DDA3937_RS14285 NADH-quinone oxidoreductase subunit L
Pseudomonas aeruginosa PUPa3 0.30 DQ20_RS57115 LysE/ArgO family amino acid transporter 0.69 DQ20_RS35010 nuoL;go_function=NADH NADH-quinone oxidoreductase subunit L low > 101
Pseudomonas aeruginosa PA14 0.30 IKLFDK_02275 lysine transporter LysE 0.69 IKLFDK_13290 NADH-quinone oxidoreductase subunit L 0.32 49
Pseudomonas aeruginosa MRSN321 0.30 DY961_RS24665 LysE/ArgO family amino acid transporter 0.69 DY961_RS03980 nuoL;go_function=NADH NADH-quinone oxidoreductase subunit L low > 100
Erwinia amylovora T8 0.30 OLJFJH_08670 arginine exporter ArgO 0.69 OLJFJH_11460 NADH-quinone oxidoreductase subunit L low > 58
Erwinia tracheiphila SCR3 0.25 LU632_RS05560 LysE family transporter 0.69 LU632_RS08015 nuoL NADH-quinone oxidoreductase subunit L low > 73
Erwinia tracheiphila HP pepo 2.2 0.22 IJEDHG_03345 lysE arginine transporter 0.69 IJEDHG_18095 nuoL NADH-quinone oxidoreductase subunit L low > 61
Pseudomonas lactucae CFBP13502 0.19 GEMAOFIL_05458 Arginine exporter protein ArgO 0.72 GEMAOFIL_03652 NADH-quinone oxidoreductase subunit L low > 96

Not shown: 26 genomes with orthologs for SO2865 only; 13 genomes with orthologs for SO1011 only