Conservation of cofitness between b4239 and b3426 in Escherichia coli BW25113

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b4239 treC trehalose-6-P hydrolase (NCBI) 1.0 b3426 glpD sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) 0.37 6
Escherichia coli ECOR38 0.99 HEPCGN_10095 treC alpha,alpha-phosphotrehalase 0.99 HEPCGN_15745 glpD glycerol-3-phosphate dehydrogenase low > 85
Escherichia coli ECRC62 0.99 BNILDI_07345 treC alpha,alpha-phosphotrehalase 0.99 BNILDI_02795 glpD glycerol-3-phosphate dehydrogenase
Escherichia coli ECOR27 0.99 NOLOHH_04165 treC alpha,alpha-phosphotrehalase 1.00 NOLOHH_08720 glpD glycerol-3-phosphate dehydrogenase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03796 Trehalose-6-phosphate hydrolase 1.00 OHPLBJKB_00278 Aerobic glycerol-3-phosphate dehydrogenase low > 73
Escherichia coli BL21 0.99 ECD_04107 trehalose-6-P hydrolase 1.00 ECD_03277 sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding low > 60
Escherichia coli ECRC99 0.99 KEDOAH_16255 treC alpha,alpha-phosphotrehalase 0.99 KEDOAH_11215 glpD glycerol-3-phosphate dehydrogenase
Escherichia coli ECRC102 0.99 NIAGMN_09750 treC alpha,alpha-phosphotrehalase 0.99 NIAGMN_14695 glpD glycerol-3-phosphate dehydrogenase
Escherichia coli ECRC101 0.99 OKFHMN_11900 treC alpha,alpha-phosphotrehalase 0.99 OKFHMN_16925 glpD glycerol-3-phosphate dehydrogenase
Escherichia coli ECRC101 0.99 MCAODC_02405 treC alpha,alpha-phosphotrehalase 0.99 MCAODC_07455 glpD glycerol-3-phosphate dehydrogenase
Escherichia coli ECRC98 0.98 JDDGAC_15540 treC alpha,alpha-phosphotrehalase 0.99 JDDGAC_20555 glpD glycerol-3-phosphate dehydrogenase
Escherichia coli Nissle 1917 0.98 ECOLIN_RS24595 alpha,alpha-phosphotrehalase 0.99 ECOLIN_RS19555 glycerol-3-phosphate dehydrogenase low > 52
Escherichia fergusonii Becca 0.98 EFB2_04294 Trehalose-6-phosphate hydrolase 0.99 EFB2_00403 Aerobic glycerol-3-phosphate dehydrogenase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF921 Trehalose-6-phosphate hydrolase (EC 3.2.1.93) 0.86 GFF587 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) low > 78
Klebsiella michiganensis M5al 0.85 BWI76_RS02960 glucohydrolase 0.84 BWI76_RS26190 glycerol-3-phosphate dehydrogenase
Enterobacter sp. TBS_079 0.82 MPMX20_00537 Trehalose-6-phosphate hydrolase 0.83 MPMX20_04309 Aerobic glycerol-3-phosphate dehydrogenase low > 85
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3438 alpha,alpha-phosphotrehalase 0.84 EX28DRAFT_4120 Glycerol-3-phosphate dehydrogenase low > 76
Serratia liquefaciens MT49 0.74 IAI46_02150 alpha,alpha-phosphotrehalase 0.77 IAI46_23915 glycerol-3-phosphate dehydrogenase
Erwinia tracheiphila SCR3 0.71 LU632_RS20965 alpha,alpha-phosphotrehalase 0.78 LU632_RS23020 glpD glycerol-3-phosphate dehydrogenase
Pectobacterium carotovorum WPP14 0.71 HER17_RS07195 alpha,alpha-phosphotrehalase 0.73 HER17_RS01510 glycerol-3-phosphate dehydrogenase
Rahnella sp. WP5 0.68 EX31_RS08390 alpha,alpha-phosphotrehalase 0.78 EX31_RS05000 glycerol-3-phosphate dehydrogenase low > 89
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_04665 alpha,alpha-phosphotrehalase 0.53 CSW01_17495 glycerol-3-phosphate dehydrogenase
Pseudomonas simiae WCS417 0.53 PS417_23045 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) 0.55 PS417_05565 glycerol-3-phosphate dehydrogenase
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_15985 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) 0.56 AO353_04190 glycerol-3-phosphate dehydrogenase low > 101
Pseudomonas fluorescens SBW25 0.52 PFLU_RS24710 alpha,alpha-phosphotrehalase 0.55 PFLU_RS05650 glycerol-3-phosphate dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS24710 alpha,alpha-phosphotrehalase 0.55 PFLU_RS05650 glycerol-3-phosphate dehydrogenase
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_835 Trehalose-6-phosphate hydrolase (EC 3.2.1.93) 0.55 Pf1N1B4_769 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) low > 87
Rhizobium sp. OAE497 0.41 ABIE40_RS29140 alpha-glucosidase 0.46 ABIE40_RS25640 glycerol-3-phosphate dehydrogenase low > 107
Azospirillum brasilense Sp245 0.30 AZOBR_RS25735 alpha-amylase 0.49 AZOBR_RS25870 glycerol-3-phosphate dehydrogenase low > 97
Pontibacter actiniarum KMM 6156, DSM 19842 0.30 CA264_04855 alpha-amylase 0.17 CA264_11355 FAD-dependent oxidoreductase low > 74
Variovorax sp. OAS795 0.29 ABID97_RS12090 alpha-amylase family glycosyl hydrolase 0.44 ABID97_RS19955 glycerol-3-phosphate dehydrogenase low > 91
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS19395 alpha-amylase family glycosyl hydrolase 0.43 QEN71_RS02235 glycerol-3-phosphate dehydrogenase
Rhodopseudomonas palustris CGA009 0.28 TX73_024730 alpha-amylase family glycosyl hydrolase 0.44 TX73_022860 glycerol-3-phosphate dehydrogenase low > 86
Pseudomonas sp. RS175 0.28 PFR28_01852 Oligo-1,6-glucosidase 1 0.54 PFR28_03370 Aerobic glycerol-3-phosphate dehydrogenase
Pseudomonas stutzeri RCH2 0.28 Psest_3785 Glycosidases 0.55 Psest_2775 Glycerol-3-phosphate dehydrogenase low > 67
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_02777 alpha-glucosidase 0.44 H281DRAFT_04228 homodimeric glycerol 3-phosphate dehydrogenase (quinone) low > 103
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.2057.1 Maltodextrin glucosidase (EC 3.2.1.20) 0.46 Xcc-8004.471.1 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) low > 74
Dyella japonica UNC79MFTsu3.2 0.26 ABZR86_RS16975 alpha-glucosidase 0.47 ABZR86_RS20025 glycerol-3-phosphate dehydrogenase low > 74
Sinorhizobium meliloti 1021 0.26 SMc01532 alpha-glycosylase 0.48 SMc01620 glycerol-3-phosphate dehydrogenase low > 103
Rhodanobacter denitrificans MT42 0.26 LRK55_RS12785 alpha-glucosidase family protein 0.18 LRK55_RS15125 glycerol-3-phosphate dehydrogenase/oxidase low > 63
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS13085 alpha-glucosidase family protein 0.18 LRK54_RS15405 glycerol-3-phosphate dehydrogenase/oxidase low > 59
Agrobacterium fabrum C58 0.26 Atu0594 alpha-glucosidase 0.45 Atu3578 glycerol-3-phosphate dehydrogenase low > 89
Phaeobacter inhibens DSM 17395 0.25 PGA1_c07890 cytoplasmic trehalase (AlgA) (from data) 0.43 PGA1_c08240 aerobic glycerol-3-phosphate dehydrogenase GlpD
Rhodospirillum rubrum S1H 0.25 Rru_A2294 Alpha amylase, catalytic region (NCBI) 0.16 Rru_A1508 FAD dependent oxidoreductase (NCBI) low > 58
Dinoroseobacter shibae DFL-12 0.23 Dshi_1649 alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) (from data) 0.41 Dshi_0630 FAD dependent oxidoreductase (RefSeq)
Variovorax sp. SCN45 0.22 GFF6332 Maltodextrin glucosidase (EC 3.2.1.20) 0.45 GFF2677 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) low > 127

Not shown: 13 genomes with orthologs for b4239 only; 30 genomes with orthologs for b3426 only